RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 CCDC179H3BU77 68 aa2.61□□□□□ -1.99
SCARNA16.4-201ENST00000516956 LORP23490 312 aaPredicted RBP2.61□□□□□ -1.99
SCARNA16.4-201ENST00000516956 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
SCARNA16.4-201ENST00000516956 ATP5EP56381 51 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.4-201ENST00000516956 H7BZZ5 65 aa2.59□□□□□ -1.99
SCARNA16.4-201ENST00000516956 COA5Q86WW8 74 aa2.58□□□□□ -2
SCARNA16.4-201ENST00000516956 MT2AP02795 61 aa2.57□□□□□ -2
SCARNA16.4-201ENST00000516956 SEC61GP60059 68 aa2.57□□□□□ -2
SCARNA16.4-201ENST00000516956 KRTAP3-3Q9BYR6 98 aa2.57□□□□□ -2
SCARNA16.4-201ENST00000516956 TMEM258P61165 79 aa2.56□□□□□ -2
SCARNA16.4-201ENST00000516956 ADM2Q7Z4H4 148 aa2.56□□□□□ -2
SCARNA16.4-201ENST00000516956 KRTAP9-8Q9BYQ0 159 aa2.56□□□□□ -2
SCARNA16.4-201ENST00000516956 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
SCARNA16.4-201ENST00000516956 H0YAA0 97 aa2.55□□□□□ -2
SCARNA16.4-201ENST00000516956 CYSTM1Q9H1C7 97 aa2.55□□□□□ -2
SCARNA16.4-201ENST00000516956 LCE2DQ5TA82 110 aaPredicted RBP2.54□□□□□ -2
SCARNA16.4-201ENST00000516956 CRIPTQ9P021 101 aa2.54□□□□□ -2
SCARNA16.4-201ENST00000516956 SERP1Q9Y6X1 66 aa2.54□□□□□ -2
SCARNA16.4-201ENST00000516956 MT1FP04733 61 aa2.53□□□□□ -2
SCARNA16.4-201ENST00000516956 PCP4P48539 62 aa2.53□□□□□ -2
SCARNA16.4-201ENST00000516956 KRTAP9-2Q9BYQ4 174 aa2.52□□□□□ -2.01
SCARNA16.4-201ENST00000516956 R4GN34 69 aa2.51□□□□□ -2.01
SCARNA16.4-201ENST00000516956 PRR15LQ9BU68 103 aa2.5□□□□□ -2.01
SCARNA16.4-201ENST00000516956 A0A1B0GU69 56 aa2.49□□□□□ -2.01
SCARNA16.4-201ENST00000516956 M0QZ58 72 aa2.49□□□□□ -2.01
SCARNA16.4-201ENST00000516956 KRTAP9-3Q9BYQ3 159 aa2.48□□□□□ -2.01
SCARNA16.4-201ENST00000516956 P0C880 135 aa2.47□□□□□ -2.01
SCARNA16.4-201ENST00000516956 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
SCARNA16.4-201ENST00000516956 Q5VV11 94 aa2.46□□□□□ -2.02
SCARNA16.4-201ENST00000516956 PLAC4Q8WY50 150 aa2.45□□□□□ -2.02
SCARNA16.4-201ENST00000516956 V9GYY9 64 aa2.45□□□□□ -2.02
SCARNA16.4-201ENST00000516956 A0A1B0GU33 70 aa2.44□□□□□ -2.02
SCARNA16.4-201ENST00000516956 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
SCARNA16.4-201ENST00000516956 KRTAP3-2Q9BYR7 98 aa2.44□□□□□ -2.02
SCARNA16.4-201ENST00000516956 LCE2BO14633 110 aa2.42□□□□□ -2.02
SCARNA16.4-201ENST00000516956 KRTAP19-1Q8IUB9 90 aa2.42□□□□□ -2.02
SCARNA16.4-201ENST00000516956 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
SCARNA16.4-201ENST00000516956 LINC01558Q9Y6Z2 57 aa2.42□□□□□ -2.02
SCARNA16.4-201ENST00000516956 SMIM26A0A096LP01 95 aa2.41□□□□□ -2.02
SCARNA16.4-201ENST00000516956 KRTAP9-6A0A140TA67 174 aa2.4□□□□□ -2.03
SCARNA16.4-201ENST00000516956 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.03
SCARNA16.4-201ENST00000516956 RPS28P62857 69 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.4-201ENST00000516956 A0A0D9SG42 100 aa2.38□□□□□ -2.03
SCARNA16.4-201ENST00000516956 UQCR11O14957 56 aa2.38□□□□□ -2.03
SCARNA16.4-201ENST00000516956 PRO2289Q9P1D8 64 aa2.38□□□□□ -2.03
SCARNA16.4-201ENST00000516956 PSPHP1O15172 72 aa2.37□□□□□ -2.03
SCARNA16.4-201ENST00000516956 Q1T7F1 81 aa2.37□□□□□ -2.03
SCARNA16.4-201ENST00000516956 SPATA8Q6RVD6 105 aa2.37□□□□□ -2.03
SCARNA16.4-201ENST00000516956 CAMK2N1Q7Z7J9 78 aa2.37□□□□□ -2.03
SCARNA16.4-201ENST00000516956 A6NN06 94 aa2.36□□□□□ -2.03
SCARNA16.4-201ENST00000516956 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
SCARNA16.4-201ENST00000516956 MT1BP07438 61 aa2.35□□□□□ -2.03
SCARNA16.4-201ENST00000516956 K7ERS5 55 aa2.34□□□□□ -2.03
SCARNA16.4-201ENST00000516956 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
SCARNA16.4-201ENST00000516956 FSIP2Q5CZC0 6907 aa2.33□□□□□ -2.04
SCARNA16.4-201ENST00000516956 A6NED7 52 aa2.33□□□□□ -2.04
SCARNA16.4-201ENST00000516956 MIR22HGQ0VDD5 57 aa2.33□□□□□ -2.04
SCARNA16.4-201ENST00000516956 KRTAP13-4Q3LI77 160 aa2.33□□□□□ -2.04
SCARNA16.4-201ENST00000516956 A8MU10 97 aa2.31□□□□□ -2.04
SCARNA16.4-201ENST00000516956 KRTAP10-5P60370 271 aa2.3□□□□□ -2.04
SCARNA16.4-201ENST00000516956 USH2AO75445 5202 aa2.29□□□□□ -2.04
SCARNA16.4-201ENST00000516956 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
SCARNA16.4-201ENST00000516956 KRTAP12-2P59991 146 aa2.26□□□□□ -2.05
SCARNA16.4-201ENST00000516956 MT1XP80297 61 aa2.25□□□□□ -2.05
SCARNA16.4-201ENST00000516956 SSPOA2VEC9 5147 aa2.24□□□□□ -2.05
SCARNA16.4-201ENST00000516956 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.22□□□□□ -2.05
SCARNA16.4-201ENST00000516956 CDC42SE1Q9NRR8 79 aa2.22□□□□□ -2.05
SCARNA16.4-201ENST00000516956 TNP1P09430 55 aa2.2□□□□□ -2.06
SCARNA16.4-201ENST00000516956 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
SCARNA16.4-201ENST00000516956 BRK1Q8WUW1 75 aa2.18□□□□□ -2.06
SCARNA16.4-201ENST00000516956 KRTAP9-7A8MTY7 169 aa2.17□□□□□ -2.06
SCARNA16.4-201ENST00000516956 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
SCARNA16.4-201ENST00000516956 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
SCARNA16.4-201ENST00000516956 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
SCARNA16.4-201ENST00000516956 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.07
SCARNA16.4-201ENST00000516956 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
SCARNA16.4-201ENST00000516956 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
SCARNA16.4-201ENST00000516956 ROMO1P60602 79 aa2.13□□□□□ -2.07
SCARNA16.4-201ENST00000516956 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
SCARNA16.4-201ENST00000516956 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
SCARNA16.4-201ENST00000516956 KRTAP4-8A0A0G2JLE6 195 aa2.1□□□□□ -2.07
SCARNA16.4-201ENST00000516956 KRTAP4-8Q9BYQ9 185 aa2.1□□□□□ -2.07
SCARNA16.4-201ENST00000516956 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
SCARNA16.4-201ENST00000516956 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.4-201ENST00000516956 PMAIP1Q13794 54 aa2.06□□□□□ -2.08
SCARNA16.4-201ENST00000516956 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
SCARNA16.4-201ENST00000516956 SPRR2EP22531 72 aa2.05□□□□□ -2.08
SCARNA16.4-201ENST00000516956 SPRR2BP35325 72 aa2.05□□□□□ -2.08
SCARNA16.4-201ENST00000516956 SPRR2AP35326 72 aa2.05□□□□□ -2.08
SCARNA16.4-201ENST00000516956 PP632Q6XCG6 107 aa2.05□□□□□ -2.08
SCARNA16.4-201ENST00000516956 KRTAP23-1A1A580 65 aa2.04□□□□□ -2.08
SCARNA16.4-201ENST00000516956 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
SCARNA16.4-201ENST00000516956 PRO0628Q9UI54 55 aa2.03□□□□□ -2.08
SCARNA16.4-201ENST00000516956 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
SCARNA16.4-201ENST00000516956 MT1EP04732 61 aa1.99□□□□□ -2.09
SCARNA16.4-201ENST00000516956 SPRR2DP22532 72 aa1.99□□□□□ -2.09
SCARNA16.4-201ENST00000516956 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
SCARNA16.4-201ENST00000516956 LCE1AQ5T7P2 110 aa1.99□□□□□ -2.09
SCARNA16.4-201ENST00000516956 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
SCARNA16.4-201ENST00000516956 KMT2DO14686 5537 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms