RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 COX6B2Q6YFQ2 88 aa6.21□□□□□ -1.42
LMNA-224ENST00000515711 Q1T7F1 81 aa6.19□□□□□ -1.42
LMNA-224ENST00000515711 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
LMNA-224ENST00000515711 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
LMNA-224ENST00000515711 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
LMNA-224ENST00000515711 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
LMNA-224ENST00000515711 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
LMNA-224ENST00000515711 LINC01558Q9Y6Z2 57 aa6.11□□□□□ -1.43
LMNA-224ENST00000515711 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
LMNA-224ENST00000515711 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
LMNA-224ENST00000515711 H1FX-AS1Q4G0G2 97 aa6.04□□□□□ -1.44
LMNA-224ENST00000515711 S4R3F8 94 aa6.03□□□□□ -1.44
LMNA-224ENST00000515711 PSPHP1O15172 72 aa6.02□□□□□ -1.45
LMNA-224ENST00000515711 MUC17Q685J3 4493 aa6.01□□□□□ -1.45
LMNA-224ENST00000515711 A0A1B0GU69 56 aa6□□□□□ -1.45
LMNA-224ENST00000515711 Q5VV11 94 aa5.99□□□□□ -1.45
LMNA-224ENST00000515711 SEC61GP60059 68 aa5.98□□□□□ -1.45
LMNA-224ENST00000515711 LCA10Q71F78 164 aa5.97□□□□□ -1.45
LMNA-224ENST00000515711 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
LMNA-224ENST00000515711 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
LMNA-224ENST00000515711 KRTAP3-3Q9BYR6 98 aa5.92□□□□□ -1.46
LMNA-224ENST00000515711 A6NED7 52 aa5.89□□□□□ -1.47
LMNA-224ENST00000515711 CSAG1Q6PB30 78 aa5.88□□□□□ -1.47
LMNA-224ENST00000515711 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
LMNA-224ENST00000515711 UQCR11O14957 56 aa5.84□□□□□ -1.47
LMNA-224ENST00000515711 KRTAP19-2Q3LHN2 52 aa5.83□□□□□ -1.48
LMNA-224ENST00000515711 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
LMNA-224ENST00000515711 H0YAA0 97 aa5.8□□□□□ -1.48
LMNA-224ENST00000515711 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
LMNA-224ENST00000515711 A0A1B0GU33 70 aa5.78□□□□□ -1.48
LMNA-224ENST00000515711 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
LMNA-224ENST00000515711 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
LMNA-224ENST00000515711 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
LMNA-224ENST00000515711 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
LMNA-224ENST00000515711 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
LMNA-224ENST00000515711 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
LMNA-224ENST00000515711 USH2AO75445 5202 aa5.7□□□□□ -1.5
LMNA-224ENST00000515711 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
LMNA-224ENST00000515711 P0C880 135 aa5.66□□□□□ -1.5
LMNA-224ENST00000515711 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
LMNA-224ENST00000515711 A8MU10 97 aa5.65□□□□□ -1.5
LMNA-224ENST00000515711 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
LMNA-224ENST00000515711 M0QZ58 72 aa5.63□□□□□ -1.51
LMNA-224ENST00000515711 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
LMNA-224ENST00000515711 FCGBPQ9Y6R7 5405 aaPredicted RBP5.62□□□□□ -1.51
LMNA-224ENST00000515711 MT1HP80294 61 aa5.62□□□□□ -1.51
LMNA-224ENST00000515711 MACF1Q9UPN3 7388 aaKnown RBP5.61□□□□□ -1.51
LMNA-224ENST00000515711 K7ERS5 55 aa5.56□□□□□ -1.52
LMNA-224ENST00000515711 M0R2T5 61 aa5.56□□□□□ -1.52
LMNA-224ENST00000515711 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
LMNA-224ENST00000515711 R4GN34 69 aa5.55□□□□□ -1.52
LMNA-224ENST00000515711 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
LMNA-224ENST00000515711 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
LMNA-224ENST00000515711 A6NN06 94 aa5.5□□□□□ -1.53
LMNA-224ENST00000515711 A0A0D9SG42 100 aa5.48□□□□□ -1.53
LMNA-224ENST00000515711 SVIPQ8NHG7 77 aa5.45□□□□□ -1.54
LMNA-224ENST00000515711 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
LMNA-224ENST00000515711 NEBP20929 6669 aa5.41□□□□□ -1.54
LMNA-224ENST00000515711 KRTAP12-1P59990 96 aa5.4□□□□□ -1.54
LMNA-224ENST00000515711 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
LMNA-224ENST00000515711 SPINT4Q6UDR6 99 aa5.38□□□□□ -1.55
LMNA-224ENST00000515711 MT2AP02795 61 aa5.37□□□□□ -1.55
LMNA-224ENST00000515711 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
LMNA-224ENST00000515711 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
LMNA-224ENST00000515711 KRTAP9-8Q9BYQ0 159 aa5.36□□□□□ -1.55
LMNA-224ENST00000515711 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
LMNA-224ENST00000515711 MT1FP04733 61 aa5.33□□□□□ -1.56
LMNA-224ENST00000515711 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
LMNA-224ENST00000515711 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
LMNA-224ENST00000515711 ROMO1P60602 79 aa5.28□□□□□ -1.56
LMNA-224ENST00000515711 KRTAP20-1Q3LI63 56 aa5.26□□□□□ -1.57
LMNA-224ENST00000515711 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
LMNA-224ENST00000515711 LCE2BO14633 110 aa5.22□□□□□ -1.57
LMNA-224ENST00000515711 CAMK2N1Q7Z7J9 78 aa5.21□□□□□ -1.58
LMNA-224ENST00000515711 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
LMNA-224ENST00000515711 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
LMNA-224ENST00000515711 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
LMNA-224ENST00000515711 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
LMNA-224ENST00000515711 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
LMNA-224ENST00000515711 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
LMNA-224ENST00000515711 MT1BP07438 61 aa5.07□□□□□ -1.6
LMNA-224ENST00000515711 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
LMNA-224ENST00000515711 KMT2DO14686 5537 aa5□□□□□ -1.61
LMNA-224ENST00000515711 TNP1P09430 55 aa4.99□□□□□ -1.61
LMNA-224ENST00000515711 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
LMNA-224ENST00000515711 MDN1Q9NU22 5596 aa4.96□□□□□ -1.61
LMNA-224ENST00000515711 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
LMNA-224ENST00000515711 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
LMNA-224ENST00000515711 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
LMNA-224ENST00000515711 MT1XP80297 61 aa4.92□□□□□ -1.62
LMNA-224ENST00000515711 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
LMNA-224ENST00000515711 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
LMNA-224ENST00000515711 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
LMNA-224ENST00000515711 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
LMNA-224ENST00000515711 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
LMNA-224ENST00000515711 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
LMNA-224ENST00000515711 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
LMNA-224ENST00000515711 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
LMNA-224ENST00000515711 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
LMNA-224ENST00000515711 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms