RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620		K7EQZ3	153 aa		4.39	□□□□□ -1.71
CLDND1-231	ENST00000515620		K7ERJ3	54 aa		4.38	□□□□□ -1.71
CLDND1-231	ENST00000515620	KRTAP5-3	Q6L8H2	238 aa		4.36	□□□□□ -1.71
CLDND1-231	ENST00000515620	C1orf64	Q8NEQ6	169 aa		4.36	□□□□□ -1.71
CLDND1-231	ENST00000515620	KRTAP12-2	P59991	146 aa		4.35	□□□□□ -1.71
CLDND1-231	ENST00000515620		A0A1B0GW54	56 aa		4.34	□□□□□ -1.71
CLDND1-231	ENST00000515620	BAALC-AS2	P0C853	105 aa		4.34	□□□□□ -1.71
CLDND1-231	ENST00000515620	SPATA45	Q537H7	98 aa		4.34	□□□□□ -1.71
CLDND1-231	ENST00000515620	NREP	Q16612	68 aa		4.33	□□□□□ -1.72
CLDND1-231	ENST00000515620	LOC110117498	A0A087WWA1	95 aa		4.32	□□□□□ -1.72
CLDND1-231	ENST00000515620	HCG22	E2RYF7	251 aa		4.31	□□□□□ -1.72
CLDND1-231	ENST00000515620	SCGB1C2	P0DMR2	95 aa		4.29	□□□□□ -1.72
CLDND1-231	ENST00000515620	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.28	□□□□□ -1.72
CLDND1-231	ENST00000515620	C14orf132	Q9NPU4	83 aa		4.28	□□□□□ -1.72
CLDND1-231	ENST00000515620	PDE6G	P18545	87 aa		4.27	□□□□□ -1.73
CLDND1-231	ENST00000515620	CXCL6	P80162	114 aa		4.27	□□□□□ -1.73
CLDND1-231	ENST00000515620	CASC2	Q6XLA1	102 aa		4.27	□□□□□ -1.73
CLDND1-231	ENST00000515620	VAMP8	Q9BV40	100 aa		4.27	□□□□□ -1.73
CLDND1-231	ENST00000515620		A8MUN3	132 aa		4.26	□□□□□ -1.73
CLDND1-231	ENST00000515620	PLAC4	Q8WY50	150 aa		4.26	□□□□□ -1.73
CLDND1-231	ENST00000515620	DST	Q03001	7570 aa	Known RBP	4.25	□□□□□ -1.73
CLDND1-231	ENST00000515620	HSD52	Q0P140	79 aa		4.25	□□□□□ -1.73
CLDND1-231	ENST00000515620		Q8N9L7	120 aa		4.23	□□□□□ -1.73
CLDND1-231	ENST00000515620		A0A087WVE0	104 aa		4.22	□□□□□ -1.73
CLDND1-231	ENST00000515620	BPY2	O14599	106 aa		4.22	□□□□□ -1.73
CLDND1-231	ENST00000515620	KRTAP10-7	P60409	375 aa	Predicted RBP	4.2	□□□□□ -1.74
CLDND1-231	ENST00000515620	ATXN8	Q156A1	80 aa		4.2	□□□□□ -1.74
CLDND1-231	ENST00000515620	S100A1	P23297	94 aa		4.19	□□□□□ -1.74
CLDND1-231	ENST00000515620		H0YAA0	97 aa		4.18	□□□□□ -1.74
CLDND1-231	ENST00000515620	ADM2	Q7Z4H4	148 aa		4.17	□□□□□ -1.74
CLDND1-231	ENST00000515620	KRTAP10-12	P60413	245 aa		4.16	□□□□□ -1.74
CLDND1-231	ENST00000515620		V9GYY9	64 aa		4.13	□□□□□ -1.75
CLDND1-231	ENST00000515620	NDUFC1	O43677	76 aa		4.12	□□□□□ -1.75
CLDND1-231	ENST00000515620	NAA38	Q9BRA0	125 aa	Known RBP	4.11	□□□□□ -1.75
CLDND1-231	ENST00000515620		R4GN34	69 aa		4.09	□□□□□ -1.75
CLDND1-231	ENST00000515620	KRTAP5-10	Q6L8G5	202 aa		4.07	□□□□□ -1.76
CLDND1-231	ENST00000515620		K7EP34	96 aa		4.06	□□□□□ -1.76
CLDND1-231	ENST00000515620	MT4	P47944	62 aa		4.06	□□□□□ -1.76
CLDND1-231	ENST00000515620	CYP4F30P	Q9H0H9	118 aa		4.06	□□□□□ -1.76
CLDND1-231	ENST00000515620		M0QZ58	72 aa		4.05	□□□□□ -1.76
CLDND1-231	ENST00000515620	UQCR10	Q9UDW1	63 aa		4.05	□□□□□ -1.76
CLDND1-231	ENST00000515620	HMCN1	Q96RW7	5635 aa		4.04	□□□□□ -1.76
CLDND1-231	ENST00000515620	LINC01554	Q52M75	96 aa		4.04	□□□□□ -1.76
CLDND1-231	ENST00000515620	TP53AIP1	Q9HCN2	124 aa		4.04	□□□□□ -1.76
CLDND1-231	ENST00000515620	AHNAK2	Q8IVF2	5795 aa		4.02	□□□□□ -1.77
CLDND1-231	ENST00000515620		P0C880	135 aa		4.01	□□□□□ -1.77
CLDND1-231	ENST00000515620	PYY3	Q5JQD4	70 aa		4	□□□□□ -1.77
CLDND1-231	ENST00000515620	TSTD3	H0UI37	97 aa		3.99	□□□□□ -1.77
CLDND1-231	ENST00000515620	PRAC1	Q96KF2	57 aa		3.99	□□□□□ -1.77
CLDND1-231	ENST00000515620	KRTAP19-3	Q7Z4W3	81 aa		3.98	□□□□□ -1.77
CLDND1-231	ENST00000515620	KRTAP5-7	Q6L8G8	165 aa		3.97	□□□□□ -1.77
CLDND1-231	ENST00000515620	C20orf197	Q8N268	126 aa		3.97	□□□□□ -1.77
CLDND1-231	ENST00000515620	LOC101927531	A0A1B0GV80	90 aa		3.96	□□□□□ -1.78
CLDND1-231	ENST00000515620		H3BT86	120 aa		3.96	□□□□□ -1.78
CLDND1-231	ENST00000515620	CYSTM1	Q9H1C7	97 aa		3.95	□□□□□ -1.78
CLDND1-231	ENST00000515620	TRAV22	A0A0B4J277	110 aa		3.94	□□□□□ -1.78
CLDND1-231	ENST00000515620	ACYP1	P07311	99 aa		3.94	□□□□□ -1.78
CLDND1-231	ENST00000515620	UBL5	Q9BZL1	73 aa		3.94	□□□□□ -1.78
CLDND1-231	ENST00000515620	MT1E	P04732	61 aa		3.93	□□□□□ -1.78
CLDND1-231	ENST00000515620	KRTAP19-7	Q3SYF9	63 aa		3.93	□□□□□ -1.78
CLDND1-231	ENST00000515620		M0R143	59 aa		3.92	□□□□□ -1.78
CLDND1-231	ENST00000515620	OCR1	Q9BZK8	76 aa		3.91	□□□□□ -1.78
CLDND1-231	ENST00000515620	SPRR5	A0A1B0GTR4	108 aa		3.89	□□□□□ -1.79
CLDND1-231	ENST00000515620	BATF	Q16520	125 aa		3.89	□□□□□ -1.79
CLDND1-231	ENST00000515620	SPCS1	Q9Y6A9	102 aa		3.88	□□□□□ -1.79
CLDND1-231	ENST00000515620	FAM240A	A0A1B0GVK7	77 aa		3.86	□□□□□ -1.79
CLDND1-231	ENST00000515620	MT-ATP8	P03928	68 aa		3.84	□□□□□ -1.79
CLDND1-231	ENST00000515620	KRTAP5-4	Q6L8H1	288 aa		3.84	□□□□□ -1.79
CLDND1-231	ENST00000515620	MT1G	P13640	62 aa		3.82	□□□□□ -1.8
CLDND1-231	ENST00000515620		H0Y9P7	68 aa		3.81	□□□□□ -1.8
CLDND1-231	ENST00000515620	PP632	Q6XCG6	107 aa		3.8	□□□□□ -1.8
CLDND1-231	ENST00000515620	LOC105371267	A0A1B0GV96	52 aa		3.79	□□□□□ -1.8
CLDND1-231	ENST00000515620	ATOX1	O00244	68 aa		3.79	□□□□□ -1.8
CLDND1-231	ENST00000515620		A0A1W2PPM0	123 aa		3.78	□□□□□ -1.8
CLDND1-231	ENST00000515620	MT3	P25713	68 aa		3.77	□□□□□ -1.81
CLDND1-231	ENST00000515620	MT1M	Q8N339	61 aa		3.77	□□□□□ -1.81
CLDND1-231	ENST00000515620	UQCRQ	O14949	82 aa		3.76	□□□□□ -1.81
CLDND1-231	ENST00000515620	TAX1BP3	O14907	124 aa		3.73	□□□□□ -1.81
CLDND1-231	ENST00000515620	KRTAP19-5	Q3LI72	72 aa		3.73	□□□□□ -1.81
CLDND1-231	ENST00000515620	KRTAP4-3	Q9BYR4	195 aa		3.73	□□□□□ -1.81
CLDND1-231	ENST00000515620	LINC00208	Q96KT6	92 aa		3.71	□□□□□ -1.82
CLDND1-231	ENST00000515620	SMIM26	A0A096LP01	95 aa		3.7	□□□□□ -1.82
CLDND1-231	ENST00000515620	CAMK2N1	Q7Z7J9	78 aa		3.7	□□□□□ -1.82
CLDND1-231	ENST00000515620	PSPHP1	O15172	72 aa		3.68	□□□□□ -1.82
CLDND1-231	ENST00000515620	MT1L	Q93083	61 aa		3.68	□□□□□ -1.82
CLDND1-231	ENST00000515620	KRTAP20-2	Q3LI61	65 aa		3.67	□□□□□ -1.82
CLDND1-231	ENST00000515620	PRO0628	Q9UI54	55 aa		3.67	□□□□□ -1.82
CLDND1-231	ENST00000515620	DMAC1	Q96GE9	116 aa		3.66	□□□□□ -1.82
CLDND1-231	ENST00000515620		A0A0D9SG42	100 aa		3.65	□□□□□ -1.83
CLDND1-231	ENST00000515620	PRO0461	Q9UI25	63 aa		3.65	□□□□□ -1.83
CLDND1-231	ENST00000515620	HIST1H4A	P62805	103 aa	Known RBP	3.62	□□□□□ -1.83
CLDND1-231	ENST00000515620	MP68	P56378	58 aa		3.59	□□□□□ -1.83
CLDND1-231	ENST00000515620	ANAPC13	Q9BS18	74 aa		3.57	□□□□□ -1.84
CLDND1-231	ENST00000515620	PMAIP1	Q13794	54 aa		3.56	□□□□□ -1.84
CLDND1-231	ENST00000515620	KRTAP13-4	Q3LI77	160 aa		3.56	□□□□□ -1.84
CLDND1-231	ENST00000515620	SMIM20	Q8N5G0	67 aa		3.55	□□□□□ -1.84
CLDND1-231	ENST00000515620	TRAV7	A0A075B6U4	112 aa		3.54	□□□□□ -1.84
CLDND1-231	ENST00000515620	ATP5EP2	Q5VTU8	51 aa		3.54	□□□□□ -1.84
CLDND1-231	ENST00000515620	NDUFAF8	A1L188	74 aa		3.52	□□□□□ -1.85
CLDND1-231	ENST00000515620	SMIM6	P0DI80	62 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms