RNA–Protein interactions for RNA: ENST00000515484.2

GPBP1-209, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-209ENST00000515484 SONP18583 2426 aaKnown RBP1.58□□□□□ -2.16
GPBP1-209ENST00000515484 DOPEY1Q5JWR5 2465 aa1.58□□□□□ -2.16
GPBP1-209ENST00000515484 TRRAPQ9Y4A5 3859 aa1.57□□□□□ -2.16
GPBP1-209ENST00000515484 SRRM2Q9UQ35 2752 aaKnown RBP1.57□□□□□ -2.16
GPBP1-209ENST00000515484 HIVEP1P15822 2718 aa1.56□□□□□ -2.16
GPBP1-209ENST00000515484 NBEAL2Q6ZNJ1 2754 aa1.56□□□□□ -2.16
GPBP1-209ENST00000515484 FRAS1Q86XX4 4008 aa1.56□□□□□ -2.16
GPBP1-209ENST00000515484 DNAH8Q96JB1 4490 aa1.55□□□□□ -2.16
GPBP1-209ENST00000515484 CHD8Q9HCK8 2581 aa1.55□□□□□ -2.16
GPBP1-209ENST00000515484 ANK2Q01484 3957 aa1.55□□□□□ -2.16
GPBP1-209ENST00000515484 MXRA5Q9NR99 2828 aa1.54□□□□□ -2.16
GPBP1-209ENST00000515484 SVEP1Q4LDE5 3571 aa1.54□□□□□ -2.16
GPBP1-209ENST00000515484 TGP01266 2768 aa1.54□□□□□ -2.16
GPBP1-209ENST00000515484 CSMD3Q7Z407 3707 aa1.54□□□□□ -2.16
GPBP1-209ENST00000515484 VPS13CQ709C8 3753 aa1.54□□□□□ -2.16
GPBP1-209ENST00000515484 PKD1L2Q7Z442 2459 aa1.54□□□□□ -2.16
GPBP1-209ENST00000515484 HELZ2Q9BYK8 2649 aaKnown RBP1.53□□□□□ -2.16
GPBP1-209ENST00000515484 ITPR3Q14573 2671 aa1.53□□□□□ -2.16
GPBP1-209ENST00000515484 MUC3AQ02505 3323 aa1.53□□□□□ -2.16
GPBP1-209ENST00000515484 DYNC2H1Q8NCM8 4307 aaKnown RBP1.53□□□□□ -2.16
GPBP1-209ENST00000515484 PRKDCP78527 4128 aaKnown RBP1.53□□□□□ -2.16
GPBP1-209ENST00000515484 NBEAL1Q6ZS30 2694 aa1.53□□□□□ -2.16
GPBP1-209ENST00000515484 EYSQ5T1H1 3165 aa1.53□□□□□ -2.17
GPBP1-209ENST00000515484 TTC28Q96AY4 2481 aa1.52□□□□□ -2.17
GPBP1-209ENST00000515484 DNAH11Q96DT5 4516 aa1.52□□□□□ -2.17
GPBP1-209ENST00000515484 LRRK2Q5S007 2527 aa1.52□□□□□ -2.17
GPBP1-209ENST00000515484 CFAP46Q8IYW2 2715 aa1.52□□□□□ -2.17
GPBP1-209ENST00000515484 CUBNO60494 3623 aa1.51□□□□□ -2.17
GPBP1-209ENST00000515484 ZNF292O60281 2723 aa1.51□□□□□ -2.17
GPBP1-209ENST00000515484 BDP1A6H8Y1 2624 aa1.51□□□□□ -2.17
GPBP1-209ENST00000515484 SETD2Q9BYW2 2564 aaPredicted RBP1.51□□□□□ -2.17
GPBP1-209ENST00000515484 PDZD2O15018 2839 aa1.51□□□□□ -2.17
GPBP1-209ENST00000515484 EPG5Q9HCE0 2579 aa1.51□□□□□ -2.17
GPBP1-209ENST00000515484 CACNA1AO00555 2505 aa1.5□□□□□ -2.17
GPBP1-209ENST00000515484 USP9YO00507 2555 aaPredicted RBP1.5□□□□□ -2.17
GPBP1-209ENST00000515484 SMR3AQ99954 134 aa1.5□□□□□ -2.17
GPBP1-209ENST00000515484 COL7A1Q02388 2944 aa1.5□□□□□ -2.17
GPBP1-209ENST00000515484 DNAH6Q9C0G6 4158 aa1.5□□□□□ -2.17
GPBP1-209ENST00000515484 DNAH2Q9P225 4427 aa1.5□□□□□ -2.17
GPBP1-209ENST00000515484 CSMD2Q7Z408 3487 aa1.49□□□□□ -2.17
GPBP1-209ENST00000515484 DNAH17Q9UFH2 4485 aa1.49□□□□□ -2.17
GPBP1-209ENST00000515484 DNAH7Q8WXX0 4024 aa1.49□□□□□ -2.17
GPBP1-209ENST00000515484 HUWE1Q7Z6Z7 4374 aaKnown RBP1.48□□□□□ -2.17
GPBP1-209ENST00000515484 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
GPBP1-209ENST00000515484 TNP1P09430 55 aa1.48□□□□□ -2.17
GPBP1-209ENST00000515484 DNAH3Q8TD57 4116 aa1.48□□□□□ -2.17
GPBP1-209ENST00000515484 LYSTQ99698 3801 aa1.48□□□□□ -2.17
GPBP1-209ENST00000515484 DNAH9Q9NYC9 4486 aa1.47□□□□□ -2.17
GPBP1-209ENST00000515484 ACANP16112 2415 aa1.47□□□□□ -2.17
GPBP1-209ENST00000515484 CMYA5Q8N3K9 4069 aa1.47□□□□□ -2.17
GPBP1-209ENST00000515484 DNAH10Q8IVF4 4471 aa1.47□□□□□ -2.17
GPBP1-209ENST00000515484 FASNP49327 2511 aaKnown RBP1.47□□□□□ -2.17
GPBP1-209ENST00000515484 FBN3Q75N90 2809 aa1.47□□□□□ -2.17
GPBP1-209ENST00000515484 ITPR2Q14571 2701 aa1.46□□□□□ -2.17
GPBP1-209ENST00000515484 ABCA12Q86UK0 2595 aa1.46□□□□□ -2.18
GPBP1-209ENST00000515484 ZANQ9Y493 2812 aa1.46□□□□□ -2.18
GPBP1-209ENST00000515484 STAB2Q8WWQ8 2551 aa1.46□□□□□ -2.18
GPBP1-209ENST00000515484 TEP1Q99973 2627 aaKnown RBP1.45□□□□□ -2.18
GPBP1-209ENST00000515484 FBN2P35556 2912 aa1.45□□□□□ -2.18
GPBP1-209ENST00000515484 ATRQ13535 2644 aa1.44□□□□□ -2.18
GPBP1-209ENST00000515484 DMBT1Q9UGM3 2413 aaPredicted RBP1.44□□□□□ -2.18
GPBP1-209ENST00000515484 C9orf92A6NGG3 77 aa1.44□□□□□ -2.18
GPBP1-209ENST00000515484 TENM3Q9P273 2699 aa1.44□□□□□ -2.18
GPBP1-209ENST00000515484 PKD1L1Q8TDX9 2849 aa1.44□□□□□ -2.18
GPBP1-209ENST00000515484 USP24Q9UPU5 2620 aa1.43□□□□□ -2.18
GPBP1-209ENST00000515484 ACACBO00763 2458 aa1.42□□□□□ -2.18
GPBP1-209ENST00000515484 HECTD4Q9Y4D8 3996 aa1.41□□□□□ -2.18
GPBP1-209ENST00000515484 FLNAP21333 2647 aaKnown RBP1.41□□□□□ -2.18
GPBP1-209ENST00000515484 NOTCH1P46531 2555 aa1.4□□□□□ -2.19
GPBP1-209ENST00000515484 SACSQ9NZJ4 4579 aa1.39□□□□□ -2.19
GPBP1-209ENST00000515484 KMT2AQ03164 3969 aa1.39□□□□□ -2.19
GPBP1-209ENST00000515484 MYO18BQ8IUG5 2567 aa1.39□□□□□ -2.19
GPBP1-209ENST00000515484 MAST4O15021 2626 aa1.38□□□□□ -2.19
GPBP1-209ENST00000515484 PKHD1L1Q86WI1 4243 aa1.37□□□□□ -2.19
GPBP1-209ENST00000515484 FLGP20930 4061 aaPredicted RBP1.37□□□□□ -2.19
GPBP1-209ENST00000515484 POLQO75417 2590 aa1.37□□□□□ -2.19
GPBP1-209ENST00000515484 MGAM2Q2M2H8 2515 aa1.35□□□□□ -2.19
GPBP1-209ENST00000515484 PKD1P98161 4303 aa1.35□□□□□ -2.19
GPBP1-209ENST00000515484 APOBP04114 4563 aaKnown RBP1.35□□□□□ -2.19
GPBP1-209ENST00000515484 ZNF469Q96JG9 3925 aaPredicted RBP1.34□□□□□ -2.19
GPBP1-209ENST00000515484 STARD9Q9P2P6 4700 aa1.34□□□□□ -2.2
GPBP1-209ENST00000515484 TNXBP22105 4242 aa1.33□□□□□ -2.2
GPBP1-209ENST00000515484 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
GPBP1-209ENST00000515484 KRTAP8-1Q8IUC2 63 aa1.33□□□□□ -2.2
GPBP1-209ENST00000515484 FLNCQ14315 2725 aa1.33□□□□□ -2.2
GPBP1-209ENST00000515484 HSPG2P98160 4391 aa1.33□□□□□ -2.2
GPBP1-209ENST00000515484 VPS13BQ7Z7G8 4022 aa1.32□□□□□ -2.2
GPBP1-209ENST00000515484 PKHD1P08F94 4074 aa1.32□□□□□ -2.2
GPBP1-209ENST00000515484 FAT2Q9NYQ8 4349 aa1.32□□□□□ -2.2
GPBP1-209ENST00000515484 NSD1Q96L73 2696 aaPredicted RBP1.32□□□□□ -2.2
GPBP1-209ENST00000515484 STAB1Q9NY15 2570 aa1.32□□□□□ -2.2
GPBP1-209ENST00000515484 IGSF10Q6WRI0 2623 aa1.32□□□□□ -2.2
GPBP1-209ENST00000515484 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
GPBP1-209ENST00000515484 FLNBO75369 2602 aaKnown RBP1.31□□□□□ -2.2
GPBP1-209ENST00000515484 DNAH5Q8TE73 4624 aa1.31□□□□□ -2.2
GPBP1-209ENST00000515484 PLECQ15149 4684 aaKnown RBP1.28□□□□□ -2.2
GPBP1-209ENST00000515484 FAT3Q8TDW7 4589 aa1.28□□□□□ -2.2
GPBP1-209ENST00000515484 DYNC1H1Q14204 4646 aaKnown RBP1.28□□□□□ -2.21
GPBP1-209ENST00000515484 KRTAP2-3P0C7H8 128 aa1.27□□□□□ -2.21
GPBP1-209ENST00000515484 KRTAP2-4Q9BYR9 128 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms