RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
SNF8-214ENST00000515174 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
SNF8-214ENST00000515174 CHKB-CPT1BH3BT56 60 aa5.3□□□□□ -1.56
SNF8-214ENST00000515174 MPLKIPQ8TAP9 179 aa5.3□□□□□ -1.56
SNF8-214ENST00000515174 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
SNF8-214ENST00000515174 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
SNF8-214ENST00000515174 SPTSSBQ8NFR3 76 aa5.25□□□□□ -1.57
SNF8-214ENST00000515174 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
SNF8-214ENST00000515174 Q5VV11 94 aa5.21□□□□□ -1.58
SNF8-214ENST00000515174 PSPHP1O15172 72 aa5.19□□□□□ -1.58
SNF8-214ENST00000515174 PRR15LQ9BU68 103 aa5.19□□□□□ -1.58
SNF8-214ENST00000515174 CRCT1Q9UGL9 99 aa5.16□□□□□ -1.58
SNF8-214ENST00000515174 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.59
SNF8-214ENST00000515174 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.59
SNF8-214ENST00000515174 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.59
SNF8-214ENST00000515174 A0A1B0GU69 56 aa5.14□□□□□ -1.59
SNF8-214ENST00000515174 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
SNF8-214ENST00000515174 SEC61GP60059 68 aa5.1□□□□□ -1.59
SNF8-214ENST00000515174 S4R3F8 94 aa5.1□□□□□ -1.59
SNF8-214ENST00000515174 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
SNF8-214ENST00000515174 LCA10Q71F78 164 aa5.08□□□□□ -1.6
SNF8-214ENST00000515174 A6NED7 52 aa5.06□□□□□ -1.6
SNF8-214ENST00000515174 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
SNF8-214ENST00000515174 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
SNF8-214ENST00000515174 UQCR11O14957 56 aa5.04□□□□□ -1.6
SNF8-214ENST00000515174 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
SNF8-214ENST00000515174 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
SNF8-214ENST00000515174 CSAG1Q6PB30 78 aa5.01□□□□□ -1.61
SNF8-214ENST00000515174 H0YAA0 97 aa4.98□□□□□ -1.61
SNF8-214ENST00000515174 A0A1B0GU33 70 aa4.97□□□□□ -1.61
SNF8-214ENST00000515174 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
SNF8-214ENST00000515174 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
SNF8-214ENST00000515174 SVIPQ8NHG7 77 aa4.93□□□□□ -1.62
SNF8-214ENST00000515174 A8MU10 97 aa4.92□□□□□ -1.62
SNF8-214ENST00000515174 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
SNF8-214ENST00000515174 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
SNF8-214ENST00000515174 M0R2T5 61 aa4.87□□□□□ -1.63
SNF8-214ENST00000515174 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
SNF8-214ENST00000515174 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
SNF8-214ENST00000515174 MT1HP80294 61 aa4.86□□□□□ -1.63
SNF8-214ENST00000515174 P0C880 135 aa4.85□□□□□ -1.63
SNF8-214ENST00000515174 M0QZ58 72 aa4.84□□□□□ -1.63
SNF8-214ENST00000515174 PMAIP1Q13794 54 aa4.83□□□□□ -1.64
SNF8-214ENST00000515174 A6NN06 94 aa4.81□□□□□ -1.64
SNF8-214ENST00000515174 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
SNF8-214ENST00000515174 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
SNF8-214ENST00000515174 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
SNF8-214ENST00000515174 K7ERS5 55 aa4.74□□□□□ -1.65
SNF8-214ENST00000515174 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
SNF8-214ENST00000515174 R4GN34 69 aa4.7□□□□□ -1.66
SNF8-214ENST00000515174 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
SNF8-214ENST00000515174 A0A0D9SG42 100 aa4.65□□□□□ -1.67
SNF8-214ENST00000515174 KRTAP12-1P59990 96 aa4.65□□□□□ -1.67
SNF8-214ENST00000515174 LCE2BO14633 110 aa4.63□□□□□ -1.67
SNF8-214ENST00000515174 SSPOA2VEC9 5147 aa4.62□□□□□ -1.67
SNF8-214ENST00000515174 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
SNF8-214ENST00000515174 USH2AO75445 5202 aa4.6□□□□□ -1.67
SNF8-214ENST00000515174 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
SNF8-214ENST00000515174 MT2AP02795 61 aa4.59□□□□□ -1.67
SNF8-214ENST00000515174 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
SNF8-214ENST00000515174 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
SNF8-214ENST00000515174 MT1FP04733 61 aa4.57□□□□□ -1.68
SNF8-214ENST00000515174 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
SNF8-214ENST00000515174 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
SNF8-214ENST00000515174 ROMO1P60602 79 aa4.56□□□□□ -1.68
SNF8-214ENST00000515174 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
SNF8-214ENST00000515174 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
SNF8-214ENST00000515174 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
SNF8-214ENST00000515174 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
SNF8-214ENST00000515174 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
SNF8-214ENST00000515174 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
SNF8-214ENST00000515174 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
SNF8-214ENST00000515174 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
SNF8-214ENST00000515174 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
SNF8-214ENST00000515174 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
SNF8-214ENST00000515174 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
SNF8-214ENST00000515174 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
SNF8-214ENST00000515174 NEBP20929 6669 aa4.36□□□□□ -1.71
SNF8-214ENST00000515174 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
SNF8-214ENST00000515174 H3BS24 57 aa4.32□□□□□ -1.72
SNF8-214ENST00000515174 MT1BP07438 61 aa4.32□□□□□ -1.72
SNF8-214ENST00000515174 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
SNF8-214ENST00000515174 TNP1P09430 55 aa4.26□□□□□ -1.73
SNF8-214ENST00000515174 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
SNF8-214ENST00000515174 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
SNF8-214ENST00000515174 MT1XP80297 61 aa4.2□□□□□ -1.74
SNF8-214ENST00000515174 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
SNF8-214ENST00000515174 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
SNF8-214ENST00000515174 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
SNF8-214ENST00000515174 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
SNF8-214ENST00000515174 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
SNF8-214ENST00000515174 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
SNF8-214ENST00000515174 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
SNF8-214ENST00000515174 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
SNF8-214ENST00000515174 KRTAP5-9P26371 169 aa4□□□□□ -1.77
SNF8-214ENST00000515174 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
SNF8-214ENST00000515174 LCE3AQ5TA76 89 aa4□□□□□ -1.77
SNF8-214ENST00000515174 KMT2DO14686 5537 aa4□□□□□ -1.77
SNF8-214ENST00000515174 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
SNF8-214ENST00000515174 SPRR2EP22531 72 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms