RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
APBB3-221ENST00000515056 KRTAP16-1A8MUX0 517 aa8.23□□□□□ -1.09
APBB3-221ENST00000515056 SPINK1P00995 79 aa8.22□□□□□ -1.09
APBB3-221ENST00000515056 J3QL48 77 aa8.2□□□□□ -1.1
APBB3-221ENST00000515056 IGKV2-30P06310 120 aa8.2□□□□□ -1.1
APBB3-221ENST00000515056 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
APBB3-221ENST00000515056 LINC00304Q8N9R0 145 aa8.15□□□□□ -1.1
APBB3-221ENST00000515056 HERC1Q15751 4861 aa8.08□□□□□ -1.12
APBB3-221ENST00000515056 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
APBB3-221ENST00000515056 ROMO1P60602 79 aa8.03□□□□□ -1.12
APBB3-221ENST00000515056 IGKV2D-30A0A075B6S6 120 aa8.02□□□□□ -1.13
APBB3-221ENST00000515056 A8MUU9 505 aa7.99□□□□□ -1.13
APBB3-221ENST00000515056 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
APBB3-221ENST00000515056 H0YAA0 97 aa7.88□□□□□ -1.15
APBB3-221ENST00000515056 HMCN2Q8NDA2 5059 aa7.86□□□□□ -1.15
APBB3-221ENST00000515056 LPAP08519 4548 aa7.84□□□□□ -1.15
APBB3-221ENST00000515056 C9orf92A6NGG3 77 aa7.82□□□□□ -1.16
APBB3-221ENST00000515056 P0C880 135 aa7.79□□□□□ -1.16
APBB3-221ENST00000515056 LRP2P98164 4655 aa7.78□□□□□ -1.16
APBB3-221ENST00000515056 A0A1B0GU33 70 aa7.76□□□□□ -1.17
APBB3-221ENST00000515056 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
APBB3-221ENST00000515056 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
APBB3-221ENST00000515056 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.18
APBB3-221ENST00000515056 K7ERS5 55 aa7.69□□□□□ -1.18
APBB3-221ENST00000515056 XP32Q5T750 250 aa7.66□□□□□ -1.18
APBB3-221ENST00000515056 COX6B2Q6YFQ2 88 aa7.64□□□□□ -1.19
APBB3-221ENST00000515056 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
APBB3-221ENST00000515056 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
APBB3-221ENST00000515056 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
APBB3-221ENST00000515056 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
APBB3-221ENST00000515056 MUC17Q685J3 4493 aa7.51□□□□□ -1.21
APBB3-221ENST00000515056 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
APBB3-221ENST00000515056 MUC2Q02817 5179 aa7.49□□□□□ -1.21
APBB3-221ENST00000515056 KRTAP15-1Q3LI76 137 aa7.49□□□□□ -1.21
APBB3-221ENST00000515056 RNF213Q63HN8 5207 aa7.47□□□□□ -1.21
APBB3-221ENST00000515056 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
APBB3-221ENST00000515056 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.23
APBB3-221ENST00000515056 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
APBB3-221ENST00000515056 S4R3F8 94 aa7.34□□□□□ -1.23
APBB3-221ENST00000515056 KRTAP10-6P60371 365 aaPredicted RBP7.32□□□□□ -1.24
APBB3-221ENST00000515056 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
APBB3-221ENST00000515056 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
APBB3-221ENST00000515056 KRTAP13-4Q3LI77 160 aa7.27□□□□□ -1.25
APBB3-221ENST00000515056 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
APBB3-221ENST00000515056 A0A0D9SG42 100 aa7.22□□□□□ -1.25
APBB3-221ENST00000515056 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
APBB3-221ENST00000515056 KRTAP19-2Q3LHN2 52 aa7.15□□□□□ -1.26
APBB3-221ENST00000515056 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
APBB3-221ENST00000515056 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
APBB3-221ENST00000515056 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
APBB3-221ENST00000515056 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
APBB3-221ENST00000515056 M0QZ58 72 aa7.03□□□□□ -1.28
APBB3-221ENST00000515056 LUZP6Q538Z0 58 aa6.99□□□□□ -1.29
APBB3-221ENST00000515056 MT1HP80294 61 aa6.97□□□□□ -1.29
APBB3-221ENST00000515056 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.29
APBB3-221ENST00000515056 M0R2T5 61 aa6.89□□□□□ -1.31
APBB3-221ENST00000515056 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
APBB3-221ENST00000515056 R4GN34 69 aa6.8□□□□□ -1.32
APBB3-221ENST00000515056 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
APBB3-221ENST00000515056 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
APBB3-221ENST00000515056 MT2AP02795 61 aa6.61□□□□□ -1.35
APBB3-221ENST00000515056 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
APBB3-221ENST00000515056 MT1FP04733 61 aa6.56□□□□□ -1.36
APBB3-221ENST00000515056 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
APBB3-221ENST00000515056 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
APBB3-221ENST00000515056 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
APBB3-221ENST00000515056 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
APBB3-221ENST00000515056 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
APBB3-221ENST00000515056 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
APBB3-221ENST00000515056 LCE2BO14633 110 aa6.34□□□□□ -1.4
APBB3-221ENST00000515056 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.4
APBB3-221ENST00000515056 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
APBB3-221ENST00000515056 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
APBB3-221ENST00000515056 FSIP2Q5CZC0 6907 aa6.3□□□□□ -1.4
APBB3-221ENST00000515056 USH2AO75445 5202 aa6.29□□□□□ -1.4
APBB3-221ENST00000515056 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
APBB3-221ENST00000515056 TNP1P09430 55 aa6.23□□□□□ -1.41
APBB3-221ENST00000515056 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
APBB3-221ENST00000515056 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
APBB3-221ENST00000515056 MT1BP07438 61 aa6.14□□□□□ -1.43
APBB3-221ENST00000515056 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
APBB3-221ENST00000515056 INE1O15225 51 aa6.08□□□□□ -1.44
APBB3-221ENST00000515056 KRTAP19-6Q3LI70 58 aa6.02□□□□□ -1.45
APBB3-221ENST00000515056 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
APBB3-221ENST00000515056 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
APBB3-221ENST00000515056 KRTAP10-5P60370 271 aa5.9□□□□□ -1.47
APBB3-221ENST00000515056 MT1XP80297 61 aa5.87□□□□□ -1.47
APBB3-221ENST00000515056 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
APBB3-221ENST00000515056 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
APBB3-221ENST00000515056 MACF1Q9UPN3 7388 aaKnown RBP5.7□□□□□ -1.5
APBB3-221ENST00000515056 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
APBB3-221ENST00000515056 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.5
APBB3-221ENST00000515056 KMT2DO14686 5537 aa5.63□□□□□ -1.51
APBB3-221ENST00000515056 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
APBB3-221ENST00000515056 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
APBB3-221ENST00000515056 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
APBB3-221ENST00000515056 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
APBB3-221ENST00000515056 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
APBB3-221ENST00000515056 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
APBB3-221ENST00000515056 KRTAP6-3Q3LI67 103 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms