RNA–Protein interactions for RNA: ENST00000514603.1

GYPA-210, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-210ENST00000514603 TMEM167AQ8TBQ9 72 aa0.22□□□□□ -2.37
GYPA-210ENST00000514603 U3KQA8 63 aa0.22□□□□□ -2.37
GYPA-210ENST00000514603 ZNF292O60281 2723 aa0.22□□□□□ -2.37
GYPA-210ENST00000514603 URB1O60287 2271 aaKnown RBP0.22□□□□□ -2.37
GYPA-210ENST00000514603 STAB1Q9NY15 2570 aa0.22□□□□□ -2.37
GYPA-210ENST00000514603 LRP2P98164 4655 aa0.22□□□□□ -2.37
GYPA-210ENST00000514603 USP9YO00507 2555 aaPredicted RBP0.21□□□□□ -2.38
GYPA-210ENST00000514603 GOLGA4Q13439 2230 aaKnown RBP0.21□□□□□ -2.38
GYPA-210ENST00000514603 UTP20O75691 2785 aaKnown RBP0.21□□□□□ -2.38
GYPA-210ENST00000514603 MRPL33O75394 65 aaKnown RBP0.21□□□□□ -2.38
GYPA-210ENST00000514603 PRLHP81277 87 aa0.21□□□□□ -2.38
GYPA-210ENST00000514603 DEFB109BQ30KR1 87 aa0.21□□□□□ -2.38
GYPA-210ENST00000514603 Q5VSD8 79 aa0.21□□□□□ -2.38
GYPA-210ENST00000514603 TOMM7Q9P0U1 55 aa0.21□□□□□ -2.38
GYPA-210ENST00000514603 PKHD1P08F94 4074 aa0.21□□□□□ -2.38
GYPA-210ENST00000514603 IGSF10Q6WRI0 2623 aa0.21□□□□□ -2.38
GYPA-210ENST00000514603 NCOR2Q9Y618 2525 aa0.21□□□□□ -2.38
GYPA-210ENST00000514603 MAP1AP78559 2803 aaPredicted RBP0.2□□□□□ -2.38
GYPA-210ENST00000514603 SYNE2Q8WXH0 6885 aaKnown RBP0.2□□□□□ -2.38
GYPA-210ENST00000514603 PRM1P04553 51 aa0.2□□□□□ -2.38
GYPA-210ENST00000514603 EP300Q09472 2414 aaPredicted RBP0.2□□□□□ -2.38
GYPA-210ENST00000514603 CNOT1A5YKK6 2376 aaKnown RBP0.2□□□□□ -2.38
GYPA-210ENST00000514603 PLCE1Q9P212 2302 aa0.2□□□□□ -2.38
GYPA-210ENST00000514603 MUC2Q02817 5179 aa0.2□□□□□ -2.38
GYPA-210ENST00000514603 DOPEY2Q9Y3R5 2298 aa0.2□□□□□ -2.38
GYPA-210ENST00000514603 GCN1Q92616 2671 aaKnown RBP0.2□□□□□ -2.38
GYPA-210ENST00000514603 NSD1Q96L73 2696 aaPredicted RBP0.2□□□□□ -2.38
GYPA-210ENST00000514603 FAM208BQ5VWN6 2430 aa0.19□□□□□ -2.38
GYPA-210ENST00000514603 WNK1Q9H4A3 2382 aa0.19□□□□□ -2.38
GYPA-210ENST00000514603 DEFB131AP59861 70 aa0.19□□□□□ -2.38
GYPA-210ENST00000514603 DEFB136Q30KP8 78 aa0.19□□□□□ -2.38
GYPA-210ENST00000514603 PRO0255Q9UI72 69 aa0.19□□□□□ -2.38
GYPA-210ENST00000514603 ATRQ13535 2644 aa0.19□□□□□ -2.38
GYPA-210ENST00000514603 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
GYPA-210ENST00000514603 ITPR1Q14643 2758 aa0.19□□□□□ -2.38
GYPA-210ENST00000514603 SETD2Q9BYW2 2564 aaPredicted RBP0.19□□□□□ -2.38
GYPA-210ENST00000514603 MACF1Q9UPN3 7388 aaKnown RBP0.19□□□□□ -2.38
GYPA-210ENST00000514603 AHCTF1Q8WYP5 2266 aa0.18□□□□□ -2.38
GYPA-210ENST00000514603 DNHD1Q96M86 4753 aa0.18□□□□□ -2.38
GYPA-210ENST00000514603 ITPR2Q14571 2701 aa0.18□□□□□ -2.38
GYPA-210ENST00000514603 NCOR1O75376 2440 aa0.18□□□□□ -2.38
GYPA-210ENST00000514603 SPTBN4Q9H254 2564 aa0.18□□□□□ -2.38
GYPA-210ENST00000514603 BIRC6Q9NR09 4857 aa0.18□□□□□ -2.38
GYPA-210ENST00000514603 HRNRQ86YZ3 2850 aaPredicted RBP0.18□□□□□ -2.38
GYPA-210ENST00000514603 NEBP20929 6669 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 USF3Q68DE3 2245 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 KRTAP20-1Q3LI63 56 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 KRTAP19-5Q3LI72 72 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 UBR4Q5T4S7 5183 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 COX14Q96I36 57 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 USMG5Q96IX5 58 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 TEP1Q99973 2627 aaKnown RBP0.17□□□□□ -2.38
GYPA-210ENST00000514603 TEX15Q9BXT5 2789 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 RNF213Q63HN8 5207 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 GVINP1Q7Z2Y8 2422 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 USH2AO75445 5202 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 COL6A5A8TX70 2615 aa0.17□□□□□ -2.38
GYPA-210ENST00000514603 USP9XQ93008 2570 aaPredicted RBP0.16□□□□□ -2.38
GYPA-210ENST00000514603 TGP01266 2768 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 PCLOQ9Y6V0 5065 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 H0YGG7 62 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 SMR3BP02814 79 aaPredicted RBP0.16□□□□□ -2.38
GYPA-210ENST00000514603 DEFB110Q30KQ9 67 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 KRTAP6-2Q3LI66 62 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 KRTAP8-1Q8IUC2 63 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 PDE4DIPQ5VU43 2346 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 KIAA1109Q2LD37 5005 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 SETXQ7Z333 2677 aaKnown RBP0.16□□□□□ -2.38
GYPA-210ENST00000514603 HMCN2Q8NDA2 5059 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 UNC79Q9P2D8 2635 aa0.16□□□□□ -2.38
GYPA-210ENST00000514603 SSPOA2VEC9 5147 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 WNK2Q9Y3S1 2297 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 SPTBN2O15020 2390 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 A0A096LNI7 61 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 RHPN1-AS1Q9BWJ2 59 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 CENPEQ02224 2701 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 KNL1Q8NG31 2342 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 ANKRD11Q6UB99 2663 aaPredicted RBP0.15□□□□□ -2.39
GYPA-210ENST00000514603 KMT2CQ8NEZ4 4911 aaKnown RBP0.15□□□□□ -2.39
GYPA-210ENST00000514603 RYR3Q15413 4870 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 HERC2O95714 4834 aa0.15□□□□□ -2.39
GYPA-210ENST00000514603 HYDINQ4G0P3 5121 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 CCDC168Q8NDH2 2452 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 CFAP46Q8IYW2 2715 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 PKDREJQ9NTG1 2253 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 A0A096LPF7 62 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 H3BUA1 57 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 HTN1P15515 57 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 DEFB108BQ8NET1 73 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 C2CD3Q4AC94 2353 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 CEP290O15078 2479 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 DSTQ03001 7570 aaKnown RBP0.14□□□□□ -2.39
GYPA-210ENST00000514603 CREBBPQ92793 2442 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 ABCA2Q9BZC7 2435 aa0.14□□□□□ -2.39
GYPA-210ENST00000514603 SPTBN1Q01082 2364 aaKnown RBP0.13□□□□□ -2.39
GYPA-210ENST00000514603 CSPG4Q6UVK1 2322 aa0.13□□□□□ -2.39
GYPA-210ENST00000514603 HIVEP3Q5T1R4 2406 aa0.13□□□□□ -2.39
GYPA-210ENST00000514603 CACNA1AO00555 2505 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms