RNA–Protein interactions for RNA: ENST00000514418.1

SEC24D-213, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 3

Gene SEC24D, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-213ENST00000514418 HIVEP1P15822 2718 aa1.24□□□□□ -2.21
SEC24D-213ENST00000514418 FLNCQ14315 2725 aa1.24□□□□□ -2.21
SEC24D-213ENST00000514418 UNC79Q9P2D8 2635 aa1.23□□□□□ -2.21
SEC24D-213ENST00000514418 LYSTQ99698 3801 aa1.23□□□□□ -2.21
SEC24D-213ENST00000514418 PRKDCP78527 4128 aaKnown RBP1.23□□□□□ -2.21
SEC24D-213ENST00000514418 SONP18583 2426 aaKnown RBP1.23□□□□□ -2.21
SEC24D-213ENST00000514418 SETD2Q9BYW2 2564 aaPredicted RBP1.23□□□□□ -2.21
SEC24D-213ENST00000514418 VWFP04275 2813 aa1.23□□□□□ -2.21
SEC24D-213ENST00000514418 PKD1L2Q7Z442 2459 aa1.23□□□□□ -2.21
SEC24D-213ENST00000514418 PDZD2O15018 2839 aa1.22□□□□□ -2.21
SEC24D-213ENST00000514418 ACACBO00763 2458 aa1.22□□□□□ -2.21
SEC24D-213ENST00000514418 ITPR3Q14573 2671 aa1.22□□□□□ -2.21
SEC24D-213ENST00000514418 H0YAA0 97 aa1.22□□□□□ -2.21
SEC24D-213ENST00000514418 LY6G6CO95867 125 aa1.22□□□□□ -2.21
SEC24D-213ENST00000514418 POLQO75417 2590 aa1.22□□□□□ -2.21
SEC24D-213ENST00000514418 TENM4Q6N022 2769 aa1.22□□□□□ -2.21
SEC24D-213ENST00000514418 MTORP42345 2549 aa1.22□□□□□ -2.21
SEC24D-213ENST00000514418 KMT2BQ9UMN6 2715 aaPredicted RBP1.22□□□□□ -2.21
SEC24D-213ENST00000514418 CENPEQ02224 2701 aa1.21□□□□□ -2.22
SEC24D-213ENST00000514418 CSMD3Q7Z407 3707 aa1.21□□□□□ -2.22
SEC24D-213ENST00000514418 SSBP3-AS1Q7Z2R9 100 aa1.21□□□□□ -2.22
SEC24D-213ENST00000514418 SPACA4Q8TDM5 124 aa1.21□□□□□ -2.22
SEC24D-213ENST00000514418 DNAH11Q96DT5 4516 aa1.21□□□□□ -2.22
SEC24D-213ENST00000514418 PIEZO1Q92508 2521 aa1.21□□□□□ -2.22
SEC24D-213ENST00000514418 CCDC168Q8NDH2 2452 aa1.21□□□□□ -2.22
SEC24D-213ENST00000514418 FBN3Q75N90 2809 aa1.21□□□□□ -2.22
SEC24D-213ENST00000514418 DNAH7Q8WXX0 4024 aa1.2□□□□□ -2.22
SEC24D-213ENST00000514418 HELZ2Q9BYK8 2649 aaKnown RBP1.2□□□□□ -2.22
SEC24D-213ENST00000514418 SACSQ9NZJ4 4579 aa1.2□□□□□ -2.22
SEC24D-213ENST00000514418 TENM3Q9P273 2699 aa1.19□□□□□ -2.22
SEC24D-213ENST00000514418 A0A087WTM6 91 aa1.19□□□□□ -2.22
SEC24D-213ENST00000514418 NUPR2A6NF83 97 aa1.19□□□□□ -2.22
SEC24D-213ENST00000514418 H1FX-AS1Q4G0G2 97 aa1.19□□□□□ -2.22
SEC24D-213ENST00000514418 ABCA12Q86UK0 2595 aa1.19□□□□□ -2.22
SEC24D-213ENST00000514418 IGSF10Q6WRI0 2623 aa1.19□□□□□ -2.22
SEC24D-213ENST00000514418 FLG2Q5D862 2391 aaPredicted RBP1.18□□□□□ -2.22
SEC24D-213ENST00000514418 FLNAP21333 2647 aaKnown RBP1.18□□□□□ -2.22
SEC24D-213ENST00000514418 TENM1Q9UKZ4 2725 aa1.18□□□□□ -2.22
SEC24D-213ENST00000514418 MEGF8Q7Z7M0 2845 aa1.18□□□□□ -2.22
SEC24D-213ENST00000514418 ACANP16112 2415 aa1.18□□□□□ -2.22
SEC24D-213ENST00000514418 HECTD4Q9Y4D8 3996 aa1.18□□□□□ -2.22
SEC24D-213ENST00000514418 COL7A1Q02388 2944 aa1.18□□□□□ -2.22
SEC24D-213ENST00000514418 HECTD1Q9ULT8 2610 aa1.18□□□□□ -2.22
SEC24D-213ENST00000514418 PKHD1L1Q86WI1 4243 aa1.17□□□□□ -2.22
SEC24D-213ENST00000514418 TEP1Q99973 2627 aaKnown RBP1.17□□□□□ -2.22
SEC24D-213ENST00000514418 APLNQ9ULZ1 77 aa1.17□□□□□ -2.22
SEC24D-213ENST00000514418 LRP1BQ9NZR2 4599 aa1.17□□□□□ -2.22
SEC24D-213ENST00000514418 MYO18BQ8IUG5 2567 aa1.16□□□□□ -2.22
SEC24D-213ENST00000514418 FAM208BQ5VWN6 2430 aa1.16□□□□□ -2.22
SEC24D-213ENST00000514418 PLECQ15149 4684 aaKnown RBP1.16□□□□□ -2.22
SEC24D-213ENST00000514418 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
SEC24D-213ENST00000514418 COX6B2Q6YFQ2 88 aa1.16□□□□□ -2.22
SEC24D-213ENST00000514418 SMR3AQ99954 134 aa1.16□□□□□ -2.22
SEC24D-213ENST00000514418 NBEAL1Q6ZS30 2694 aa1.16□□□□□ -2.22
SEC24D-213ENST00000514418 ZNF462Q96JM2 2506 aa1.16□□□□□ -2.22
SEC24D-213ENST00000514418 CRIPTQ9P021 101 aa1.15□□□□□ -2.23
SEC24D-213ENST00000514418 FLNBO75369 2602 aaKnown RBP1.15□□□□□ -2.23
SEC24D-213ENST00000514418 FAT2Q9NYQ8 4349 aa1.14□□□□□ -2.23
SEC24D-213ENST00000514418 DNAH5Q8TE73 4624 aa1.14□□□□□ -2.23
SEC24D-213ENST00000514418 NBDYA0A0U1RRE5 68 aa1.14□□□□□ -2.23
SEC24D-213ENST00000514418 SPINK1P00995 79 aa1.14□□□□□ -2.23
SEC24D-213ENST00000514418 RPL37P61927 97 aaKnown RBP1.14□□□□□ -2.23
SEC24D-213ENST00000514418 ITPR2Q14571 2701 aa1.14□□□□□ -2.23
SEC24D-213ENST00000514418 CACNA1AO00555 2505 aa1.14□□□□□ -2.23
SEC24D-213ENST00000514418 PKD1P98161 4303 aa1.13□□□□□ -2.23
SEC24D-213ENST00000514418 ATRQ13535 2644 aa1.13□□□□□ -2.23
SEC24D-213ENST00000514418 NSD1Q96L73 2696 aaPredicted RBP1.13□□□□□ -2.23
SEC24D-213ENST00000514418 MAST4O15021 2626 aa1.13□□□□□ -2.23
SEC24D-213ENST00000514418 USP24Q9UPU5 2620 aa1.13□□□□□ -2.23
SEC24D-213ENST00000514418 FASNP49327 2511 aaKnown RBP1.13□□□□□ -2.23
SEC24D-213ENST00000514418 TGP01266 2768 aa1.12□□□□□ -2.23
SEC24D-213ENST00000514418 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
SEC24D-213ENST00000514418 KMT2AQ03164 3969 aa1.12□□□□□ -2.23
SEC24D-213ENST00000514418 HSPG2P98160 4391 aa1.12□□□□□ -2.23
SEC24D-213ENST00000514418 VPS13BQ7Z7G8 4022 aa1.12□□□□□ -2.23
SEC24D-213ENST00000514418 NOTCH1P46531 2555 aa1.11□□□□□ -2.23
SEC24D-213ENST00000514418 LRP1Q07954 4544 aaKnown RBP1.11□□□□□ -2.23
SEC24D-213ENST00000514418 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
SEC24D-213ENST00000514418 UBE2DNLQ8IWF7 75 aa1.1□□□□□ -2.23
SEC24D-213ENST00000514418 S4R3F8 94 aa1.1□□□□□ -2.23
SEC24D-213ENST00000514418 MYCBP2O75592 4640 aa1.1□□□□□ -2.23
SEC24D-213ENST00000514418 TNXBP22105 4242 aa1.1□□□□□ -2.23
SEC24D-213ENST00000514418 APOBP04114 4563 aaKnown RBP1.1□□□□□ -2.23
SEC24D-213ENST00000514418 COL6A5A8TX70 2615 aa1.1□□□□□ -2.23
SEC24D-213ENST00000514418 DYNC1H1Q14204 4646 aaKnown RBP1.09□□□□□ -2.23
SEC24D-213ENST00000514418 FAT3Q8TDW7 4589 aa1.08□□□□□ -2.24
SEC24D-213ENST00000514418 PKHD1P08F94 4074 aa1.08□□□□□ -2.24
SEC24D-213ENST00000514418 STAB2Q8WWQ8 2551 aa1.08□□□□□ -2.24
SEC24D-213ENST00000514418 STAB1Q9NY15 2570 aa1.07□□□□□ -2.24
SEC24D-213ENST00000514418 M0QZ58 72 aa1.07□□□□□ -2.24
SEC24D-213ENST00000514418 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
SEC24D-213ENST00000514418 PLAC4Q8WY50 150 aa1.07□□□□□ -2.24
SEC24D-213ENST00000514418 DMBT1Q9UGM3 2413 aaPredicted RBP1.06□□□□□ -2.24
SEC24D-213ENST00000514418 A0A0D9SG42 100 aa1.06□□□□□ -2.24
SEC24D-213ENST00000514418 STARD9Q9P2P6 4700 aa1.06□□□□□ -2.24
SEC24D-213ENST00000514418 FAT1Q14517 4588 aa1.05□□□□□ -2.24
SEC24D-213ENST00000514418 MGAM2Q2M2H8 2515 aa1.05□□□□□ -2.24
SEC24D-213ENST00000514418 C9orf92A6NGG3 77 aa1.03□□□□□ -2.24
SEC24D-213ENST00000514418 HYDINQ4G0P3 5121 aa0.99□□□□□ -2.25
SEC24D-213ENST00000514418 MUC17Q685J3 4493 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms