RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 K7ERU9 68 aa7.32□□□□□ -1.24
DDX41-214ENST00000512334 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
DDX41-214ENST00000512334 A8MUN3 132 aa7.28□□□□□ -1.24
DDX41-214ENST00000512334 H3BPC8 53 aa7.28□□□□□ -1.24
DDX41-214ENST00000512334 MT-ATP8P03928 68 aa7.27□□□□□ -1.25
DDX41-214ENST00000512334 IMUPQ9GZP8 106 aa7.27□□□□□ -1.25
DDX41-214ENST00000512334 NDUFC1O43677 76 aa7.26□□□□□ -1.25
DDX41-214ENST00000512334 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
DDX41-214ENST00000512334 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
DDX41-214ENST00000512334 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
DDX41-214ENST00000512334 SVIPQ8NHG7 77 aa7.19□□□□□ -1.26
DDX41-214ENST00000512334 PCP4P48539 62 aa7.16□□□□□ -1.26
DDX41-214ENST00000512334 SMIM20Q8N5G0 67 aa7.15□□□□□ -1.26
DDX41-214ENST00000512334 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.26
DDX41-214ENST00000512334 TRAV7A0A075B6U4 112 aa7.14□□□□□ -1.27
DDX41-214ENST00000512334 H0YAA0 97 aa7.12□□□□□ -1.27
DDX41-214ENST00000512334 Q5VV11 94 aa7.12□□□□□ -1.27
DDX41-214ENST00000512334 DMAC1Q96GE9 116 aa7.12□□□□□ -1.27
DDX41-214ENST00000512334 CRIPTQ9P021 101 aa7.11□□□□□ -1.27
DDX41-214ENST00000512334 ADM2Q7Z4H4 148 aa7.09□□□□□ -1.27
DDX41-214ENST00000512334 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
DDX41-214ENST00000512334 MT1BP07438 61 aa7.07□□□□□ -1.28
DDX41-214ENST00000512334 SNURFQ9Y675 71 aa7.01□□□□□ -1.29
DDX41-214ENST00000512334 ACYP2P14621 99 aa7□□□□□ -1.29
DDX41-214ENST00000512334 A6NN06 94 aa6.99□□□□□ -1.29
DDX41-214ENST00000512334 MACF1Q9UPN3 7388 aaKnown RBP6.98□□□□□ -1.29
DDX41-214ENST00000512334 C20orf197Q8N268 126 aa6.95□□□□□ -1.3
DDX41-214ENST00000512334 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
DDX41-214ENST00000512334 P0C880 135 aa6.92□□□□□ -1.3
DDX41-214ENST00000512334 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
DDX41-214ENST00000512334 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
DDX41-214ENST00000512334 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
DDX41-214ENST00000512334 R4GN34 69 aa6.9□□□□□ -1.3
DDX41-214ENST00000512334 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
DDX41-214ENST00000512334 M0QZ58 72 aa6.86□□□□□ -1.31
DDX41-214ENST00000512334 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
DDX41-214ENST00000512334 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
DDX41-214ENST00000512334 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
DDX41-214ENST00000512334 LINC01554Q52M75 96 aa6.78□□□□□ -1.32
DDX41-214ENST00000512334 COX7CP15954 63 aa6.77□□□□□ -1.33
DDX41-214ENST00000512334 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
DDX41-214ENST00000512334 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
DDX41-214ENST00000512334 COA5Q86WW8 74 aa6.69□□□□□ -1.34
DDX41-214ENST00000512334 MT1XP80297 61 aa6.67□□□□□ -1.34
DDX41-214ENST00000512334 H7BZZ5 65 aa6.64□□□□□ -1.35
DDX41-214ENST00000512334 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
DDX41-214ENST00000512334 ANAPC13Q9BS18 74 aa6.63□□□□□ -1.35
DDX41-214ENST00000512334 NEBP20929 6669 aa6.61□□□□□ -1.35
DDX41-214ENST00000512334 SEC61GP60059 68 aa6.56□□□□□ -1.36
DDX41-214ENST00000512334 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
DDX41-214ENST00000512334 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
DDX41-214ENST00000512334 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
DDX41-214ENST00000512334 KMT2DO14686 5537 aa6.5□□□□□ -1.37
DDX41-214ENST00000512334 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
DDX41-214ENST00000512334 CCDC179H3BU77 68 aa6.48□□□□□ -1.37
DDX41-214ENST00000512334 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
DDX41-214ENST00000512334 KRTAP8-1Q8IUC2 63 aa6.42□□□□□ -1.38
DDX41-214ENST00000512334 A0A1B0GU33 70 aa6.4□□□□□ -1.38
DDX41-214ENST00000512334 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
DDX41-214ENST00000512334 A0A0D9SG42 100 aa6.39□□□□□ -1.39
DDX41-214ENST00000512334 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
DDX41-214ENST00000512334 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
DDX41-214ENST00000512334 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
DDX41-214ENST00000512334 A0A1B0GU69 56 aa6.36□□□□□ -1.39
DDX41-214ENST00000512334 ATP5EP56381 51 aaPredicted RBP6.36□□□□□ -1.39
DDX41-214ENST00000512334 KRTAP20-1Q3LI63 56 aa6.36□□□□□ -1.39
DDX41-214ENST00000512334 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
DDX41-214ENST00000512334 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
DDX41-214ENST00000512334 MDN1Q9NU22 5596 aa6.33□□□□□ -1.4
DDX41-214ENST00000512334 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
DDX41-214ENST00000512334 SPINT4Q6UDR6 99 aa6.29□□□□□ -1.4
DDX41-214ENST00000512334 SPRR2EP22531 72 aa6.27□□□□□ -1.41
DDX41-214ENST00000512334 SPRR2BP35325 72 aa6.27□□□□□ -1.41
DDX41-214ENST00000512334 SPRR2AP35326 72 aa6.27□□□□□ -1.41
DDX41-214ENST00000512334 TMEM258P61165 79 aa6.24□□□□□ -1.41
DDX41-214ENST00000512334 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
DDX41-214ENST00000512334 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
DDX41-214ENST00000512334 PRR15LQ9BU68 103 aa6.21□□□□□ -1.42
DDX41-214ENST00000512334 RPS28P62857 69 aaKnown RBP6.19□□□□□ -1.42
DDX41-214ENST00000512334 A8MU10 97 aa6.17□□□□□ -1.42
DDX41-214ENST00000512334 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
DDX41-214ENST00000512334 GPR98Q8WXG9 6306 aa6.15□□□□□ -1.42
DDX41-214ENST00000512334 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
DDX41-214ENST00000512334 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
DDX41-214ENST00000512334 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
DDX41-214ENST00000512334 SPRR2DP22532 72 aa6.06□□□□□ -1.44
DDX41-214ENST00000512334 UQCR11O14957 56 aa6□□□□□ -1.45
DDX41-214ENST00000512334 KRTAP19-7Q3SYF9 63 aa5.95□□□□□ -1.46
DDX41-214ENST00000512334 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
DDX41-214ENST00000512334 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
DDX41-214ENST00000512334 TNP1P09430 55 aa5.91□□□□□ -1.46
DDX41-214ENST00000512334 MT1EP04732 61 aa5.9□□□□□ -1.46
DDX41-214ENST00000512334 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
DDX41-214ENST00000512334 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
DDX41-214ENST00000512334 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
DDX41-214ENST00000512334 V9GYY9 64 aa5.88□□□□□ -1.47
DDX41-214ENST00000512334 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
DDX41-214ENST00000512334 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
DDX41-214ENST00000512334 PSPHP1O15172 72 aa5.86□□□□□ -1.47
DDX41-214ENST00000512334 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms