RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 MP68P56378 58 aa7.72□□□□□ -1.17
SMN2-210ENST00000511812 LINC00208Q96KT6 92 aa7.71□□□□□ -1.18
SMN2-210ENST00000511812 KRTAP9-7A8MTY7 169 aa7.68□□□□□ -1.18
SMN2-210ENST00000511812 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
SMN2-210ENST00000511812 A8MUN3 132 aa7.65□□□□□ -1.18
SMN2-210ENST00000511812 NDUFC1O43677 76 aa7.65□□□□□ -1.18
SMN2-210ENST00000511812 SCGB1A1P11684 91 aa7.64□□□□□ -1.19
SMN2-210ENST00000511812 KLKP1Q107X0 134 aa7.64□□□□□ -1.19
SMN2-210ENST00000511812 IMUPQ9GZP8 106 aa7.61□□□□□ -1.19
SMN2-210ENST00000511812 H3BPC8 53 aa7.59□□□□□ -1.19
SMN2-210ENST00000511812 SPRR2GQ9BYE4 73 aa7.59□□□□□ -1.19
SMN2-210ENST00000511812 Q5VV11 94 aa7.58□□□□□ -1.2
SMN2-210ENST00000511812 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
SMN2-210ENST00000511812 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
SMN2-210ENST00000511812 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
SMN2-210ENST00000511812 H0YAA0 97 aa7.51□□□□□ -1.21
SMN2-210ENST00000511812 MT1BP07438 61 aa7.51□□□□□ -1.21
SMN2-210ENST00000511812 K7ERU9 68 aa7.49□□□□□ -1.21
SMN2-210ENST00000511812 A6NN06 94 aa7.47□□□□□ -1.21
SMN2-210ENST00000511812 ADM2Q7Z4H4 148 aa7.46□□□□□ -1.22
SMN2-210ENST00000511812 MT-ATP8P03928 68 aa7.44□□□□□ -1.22
SMN2-210ENST00000511812 DMAC1Q96GE9 116 aa7.43□□□□□ -1.22
SMN2-210ENST00000511812 SMIM20Q8N5G0 67 aa7.42□□□□□ -1.22
SMN2-210ENST00000511812 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
SMN2-210ENST00000511812 TRAV7A0A075B6U4 112 aa7.37□□□□□ -1.23
SMN2-210ENST00000511812 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
SMN2-210ENST00000511812 C20orf197Q8N268 126 aa7.35□□□□□ -1.23
SMN2-210ENST00000511812 SYNE2Q8WXH0 6885 aaKnown RBP7.35□□□□□ -1.23
SMN2-210ENST00000511812 KRTAP6-3Q3LI67 103 aa7.32□□□□□ -1.24
SMN2-210ENST00000511812 ACYP2P14621 99 aa7.31□□□□□ -1.24
SMN2-210ENST00000511812 R4GN34 69 aa7.29□□□□□ -1.24
SMN2-210ENST00000511812 P0C880 135 aa7.26□□□□□ -1.25
SMN2-210ENST00000511812 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
SMN2-210ENST00000511812 M0QZ58 72 aa7.23□□□□□ -1.25
SMN2-210ENST00000511812 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
SMN2-210ENST00000511812 SNURFQ9Y675 71 aa7.22□□□□□ -1.25
SMN2-210ENST00000511812 CHKB-CPT1BH3BT56 60 aa7.21□□□□□ -1.26
SMN2-210ENST00000511812 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
SMN2-210ENST00000511812 LCE3BQ5TA77 95 aa7.16□□□□□ -1.26
SMN2-210ENST00000511812 SERP2Q8N6R1 65 aa7.15□□□□□ -1.26
SMN2-210ENST00000511812 KRTAP4-12Q9BQ66 201 aa7.14□□□□□ -1.27
SMN2-210ENST00000511812 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
SMN2-210ENST00000511812 SPANXA2-OT1Q8N9U9 137 aa7.11□□□□□ -1.27
SMN2-210ENST00000511812 MT1XP80297 61 aa7.06□□□□□ -1.28
SMN2-210ENST00000511812 KRTAP9-9Q9BYP9 154 aa7.05□□□□□ -1.28
SMN2-210ENST00000511812 KRTAP9-4Q9BYQ2 154 aa7.05□□□□□ -1.28
SMN2-210ENST00000511812 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
SMN2-210ENST00000511812 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
SMN2-210ENST00000511812 COX7CP15954 63 aa6.95□□□□□ -1.3
SMN2-210ENST00000511812 MUC12Q9UKN1 5478 aa6.92□□□□□ -1.3
SMN2-210ENST00000511812 COA5Q86WW8 74 aa6.92□□□□□ -1.3
SMN2-210ENST00000511812 NEBP20929 6669 aa6.91□□□□□ -1.3
SMN2-210ENST00000511812 KRTAP12-2P59991 146 aa6.9□□□□□ -1.3
SMN2-210ENST00000511812 KRTAP8-1Q8IUC2 63 aa6.86□□□□□ -1.31
SMN2-210ENST00000511812 SPRR2FQ96RM1 72 aa6.86□□□□□ -1.31
SMN2-210ENST00000511812 SEC61GP60059 68 aa6.85□□□□□ -1.31
SMN2-210ENST00000511812 KMT2DO14686 5537 aa6.84□□□□□ -1.32
SMN2-210ENST00000511812 SERP1Q9Y6X1 66 aa6.83□□□□□ -1.32
SMN2-210ENST00000511812 H7BZZ5 65 aa6.8□□□□□ -1.32
SMN2-210ENST00000511812 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
SMN2-210ENST00000511812 KRTAP20-1Q3LI63 56 aa6.77□□□□□ -1.33
SMN2-210ENST00000511812 CYSTM1Q9H1C7 97 aa6.76□□□□□ -1.33
SMN2-210ENST00000511812 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
SMN2-210ENST00000511812 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
SMN2-210ENST00000511812 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
SMN2-210ENST00000511812 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
SMN2-210ENST00000511812 SPRR2EP22531 72 aa6.73□□□□□ -1.33
SMN2-210ENST00000511812 SPRR2BP35325 72 aa6.73□□□□□ -1.33
SMN2-210ENST00000511812 SPRR2AP35326 72 aa6.73□□□□□ -1.33
SMN2-210ENST00000511812 MDN1Q9NU22 5596 aa6.72□□□□□ -1.33
SMN2-210ENST00000511812 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
SMN2-210ENST00000511812 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
SMN2-210ENST00000511812 A0A1B0GU33 70 aa6.67□□□□□ -1.34
SMN2-210ENST00000511812 A0A0D9SG42 100 aa6.66□□□□□ -1.34
SMN2-210ENST00000511812 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
SMN2-210ENST00000511812 LCE1AQ5T7P2 110 aa6.61□□□□□ -1.35
SMN2-210ENST00000511812 A0A1B0GU69 56 aa6.6□□□□□ -1.35
SMN2-210ENST00000511812 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
SMN2-210ENST00000511812 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
SMN2-210ENST00000511812 CCDC179H3BU77 68 aa6.58□□□□□ -1.36
SMN2-210ENST00000511812 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
SMN2-210ENST00000511812 KRTAP4-9Q9BYQ8 210 aa6.55□□□□□ -1.36
SMN2-210ENST00000511812 ATP5EP56381 51 aaPredicted RBP6.53□□□□□ -1.36
SMN2-210ENST00000511812 SMIM26A0A096LP01 95 aa6.51□□□□□ -1.37
SMN2-210ENST00000511812 SPRR2DP22532 72 aa6.51□□□□□ -1.37
SMN2-210ENST00000511812 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
SMN2-210ENST00000511812 KRTAP4-2Q9BYR5 136 aa6.48□□□□□ -1.37
SMN2-210ENST00000511812 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
SMN2-210ENST00000511812 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.38
SMN2-210ENST00000511812 KRTAP2-1Q9BYU5 128 aa6.4□□□□□ -1.38
SMN2-210ENST00000511812 A8MU10 97 aa6.39□□□□□ -1.39
SMN2-210ENST00000511812 TMEM258P61165 79 aa6.37□□□□□ -1.39
SMN2-210ENST00000511812 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
SMN2-210ENST00000511812 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
SMN2-210ENST00000511812 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
SMN2-210ENST00000511812 MT1EP04732 61 aa6.26□□□□□ -1.41
SMN2-210ENST00000511812 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
SMN2-210ENST00000511812 TNP1P09430 55 aa6.22□□□□□ -1.41
SMN2-210ENST00000511812 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
SMN2-210ENST00000511812 UQCR11O14957 56 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms