RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 DSTQ03001 7570 aaKnown RBP7.77□□□□□ -1.16
HMGCS1-206ENST00000511774 PYY3Q5JQD4 70 aa7.72□□□□□ -1.17
HMGCS1-206ENST00000511774 A8MUN3 132 aa7.69□□□□□ -1.18
HMGCS1-206ENST00000511774 UQCR10Q9UDW1 63 aa7.68□□□□□ -1.18
HMGCS1-206ENST00000511774 KRTAP4-9Q9BYQ8 210 aa7.67□□□□□ -1.18
HMGCS1-206ENST00000511774 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
HMGCS1-206ENST00000511774 H0YAA0 97 aa7.65□□□□□ -1.18
HMGCS1-206ENST00000511774 KRTAP10-7P60409 375 aaPredicted RBP7.65□□□□□ -1.18
HMGCS1-206ENST00000511774 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
HMGCS1-206ENST00000511774 KRTAP10-12P60413 245 aa7.57□□□□□ -1.2
HMGCS1-206ENST00000511774 CYP4F30PQ9H0H9 118 aa7.54□□□□□ -1.2
HMGCS1-206ENST00000511774 K7EP34 96 aa7.5□□□□□ -1.21
HMGCS1-206ENST00000511774 NDUFC1O43677 76 aa7.49□□□□□ -1.21
HMGCS1-206ENST00000511774 TP53AIP1Q9HCN2 124 aa7.48□□□□□ -1.21
HMGCS1-206ENST00000511774 H3BT86 120 aa7.46□□□□□ -1.22
HMGCS1-206ENST00000511774 HMCN1Q96RW7 5635 aa7.42□□□□□ -1.22
HMGCS1-206ENST00000511774 TSTD3H0UI37 97 aa7.41□□□□□ -1.22
HMGCS1-206ENST00000511774 M0R143 59 aa7.41□□□□□ -1.22
HMGCS1-206ENST00000511774 P0C880 135 aa7.4□□□□□ -1.22
HMGCS1-206ENST00000511774 R4GN34 69 aa7.4□□□□□ -1.22
HMGCS1-206ENST00000511774 LCE1DQ5T752 114 aa7.39□□□□□ -1.23
HMGCS1-206ENST00000511774 AHNAK2Q8IVF2 5795 aa7.37□□□□□ -1.23
HMGCS1-206ENST00000511774 M0QZ58 72 aa7.35□□□□□ -1.23
HMGCS1-206ENST00000511774 LCE5AQ5TCM9 118 aa7.33□□□□□ -1.24
HMGCS1-206ENST00000511774 UBL5Q9BZL1 73 aa7.32□□□□□ -1.24
HMGCS1-206ENST00000511774 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
HMGCS1-206ENST00000511774 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
HMGCS1-206ENST00000511774 C20orf197Q8N268 126 aa7.28□□□□□ -1.24
HMGCS1-206ENST00000511774 TRAV22A0A0B4J277 110 aa7.27□□□□□ -1.25
HMGCS1-206ENST00000511774 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
HMGCS1-206ENST00000511774 A0A1W2PPM0 123 aa7.22□□□□□ -1.25
HMGCS1-206ENST00000511774 ACYP1P07311 99 aa7.22□□□□□ -1.25
HMGCS1-206ENST00000511774 KRTAP5-10Q6L8G5 202 aa7.22□□□□□ -1.25
HMGCS1-206ENST00000511774 C9orf118A6NHY6 69 aa7.21□□□□□ -1.26
HMGCS1-206ENST00000511774 SPCS1Q9Y6A9 102 aa7.21□□□□□ -1.26
HMGCS1-206ENST00000511774 MT4P47944 62 aa7.2□□□□□ -1.26
HMGCS1-206ENST00000511774 BATFQ16520 125 aa7.2□□□□□ -1.26
HMGCS1-206ENST00000511774 KRTAP19-7Q3SYF9 63 aa7.19□□□□□ -1.26
HMGCS1-206ENST00000511774 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
HMGCS1-206ENST00000511774 TAX1BP3O14907 124 aa7.17□□□□□ -1.26
HMGCS1-206ENST00000511774 MT1EP04732 61 aa7.14□□□□□ -1.27
HMGCS1-206ENST00000511774 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
HMGCS1-206ENST00000511774 TMA7Q9Y2S6 64 aaKnown RBP7.09□□□□□ -1.27
HMGCS1-206ENST00000511774 H0Y9P7 68 aa7.08□□□□□ -1.28
HMGCS1-206ENST00000511774 ATOX1O00244 68 aa7.07□□□□□ -1.28
HMGCS1-206ENST00000511774 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
HMGCS1-206ENST00000511774 CYSTM1Q9H1C7 97 aa7.05□□□□□ -1.28
HMGCS1-206ENST00000511774 UQCRQO14949 82 aa7□□□□□ -1.29
HMGCS1-206ENST00000511774 KRTAP5-7Q6L8G8 165 aa7□□□□□ -1.29
HMGCS1-206ENST00000511774 KRTAP4-6Q9BYQ5 205 aa6.97□□□□□ -1.29
HMGCS1-206ENST00000511774 KRTAP5-4Q6L8H1 288 aa6.93□□□□□ -1.3
HMGCS1-206ENST00000511774 MT-ATP8P03928 68 aa6.92□□□□□ -1.3
HMGCS1-206ENST00000511774 LINC00208Q96KT6 92 aa6.91□□□□□ -1.3
HMGCS1-206ENST00000511774 MT1GP13640 62 aa6.9□□□□□ -1.3
HMGCS1-206ENST00000511774 KRTAP5-3Q6L8H2 238 aa6.87□□□□□ -1.31
HMGCS1-206ENST00000511774 MT1MQ8N339 61 aa6.84□□□□□ -1.31
HMGCS1-206ENST00000511774 SMIM6P0DI80 62 aa6.83□□□□□ -1.32
HMGCS1-206ENST00000511774 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
HMGCS1-206ENST00000511774 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
HMGCS1-206ENST00000511774 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
HMGCS1-206ENST00000511774 HIST1H4AP62805 103 aaKnown RBP6.77□□□□□ -1.33
HMGCS1-206ENST00000511774 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
HMGCS1-206ENST00000511774 ETDBQ3ZM63 59 aa6.74□□□□□ -1.33
HMGCS1-206ENST00000511774 MP68P56378 58 aa6.73□□□□□ -1.33
HMGCS1-206ENST00000511774 ATP5EP2Q5VTU8 51 aa6.73□□□□□ -1.33
HMGCS1-206ENST00000511774 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.34
HMGCS1-206ENST00000511774 MT1LQ93083 61 aa6.7□□□□□ -1.34
HMGCS1-206ENST00000511774 CAMK2N1Q7Z7J9 78 aa6.68□□□□□ -1.34
HMGCS1-206ENST00000511774 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
HMGCS1-206ENST00000511774 OCR1Q9BZK8 76 aa6.67□□□□□ -1.34
HMGCS1-206ENST00000511774 A0A0D9SG42 100 aa6.64□□□□□ -1.35
HMGCS1-206ENST00000511774 SPTSSBQ8NFR3 76 aa6.61□□□□□ -1.35
HMGCS1-206ENST00000511774 TRAV7A0A075B6U4 112 aa6.59□□□□□ -1.35
HMGCS1-206ENST00000511774 F8W1H4 67 aa6.58□□□□□ -1.36
HMGCS1-206ENST00000511774 KRTAP20-2Q3LI61 65 aa6.58□□□□□ -1.36
HMGCS1-206ENST00000511774 H3BPC8 53 aa6.57□□□□□ -1.36
HMGCS1-206ENST00000511774 COL5A1-AS1Q5SY13 56 aa6.57□□□□□ -1.36
HMGCS1-206ENST00000511774 GTF2H5Q6ZYL4 71 aa6.56□□□□□ -1.36
HMGCS1-206ENST00000511774 FAM240AA0A1B0GVK7 77 aa6.5□□□□□ -1.37
HMGCS1-206ENST00000511774 ACYP2P14621 99 aa6.45□□□□□ -1.38
HMGCS1-206ENST00000511774 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
HMGCS1-206ENST00000511774 LINC00643Q86TS7 51 aa6.38□□□□□ -1.39
HMGCS1-206ENST00000511774 KRTAP5-5Q701N2 237 aaPredicted RBP6.36□□□□□ -1.39
HMGCS1-206ENST00000511774 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
HMGCS1-206ENST00000511774 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
HMGCS1-206ENST00000511774 LOC105371267A0A1B0GV96 52 aa6.33□□□□□ -1.4
HMGCS1-206ENST00000511774 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
HMGCS1-206ENST00000511774 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
HMGCS1-206ENST00000511774 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
HMGCS1-206ENST00000511774 AHNAKQ09666 5890 aaKnown RBP6.24□□□□□ -1.41
HMGCS1-206ENST00000511774 SCGB1A1P11684 91 aa6.22□□□□□ -1.41
HMGCS1-206ENST00000511774 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
HMGCS1-206ENST00000511774 MUC5ACP98088 5654 aa6.18□□□□□ -1.42
HMGCS1-206ENST00000511774 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
HMGCS1-206ENST00000511774 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
HMGCS1-206ENST00000511774 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
HMGCS1-206ENST00000511774 MUC5BQ9HC84 5762 aaPredicted RBP6.16□□□□□ -1.42
HMGCS1-206ENST00000511774 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
HMGCS1-206ENST00000511774 SEC61GP60059 68 aa6.03□□□□□ -1.44
HMGCS1-206ENST00000511774 KRTAP5-8O75690 187 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms