RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
NR1I3-228ENST00000511676 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
NR1I3-228ENST00000511676 FAM236DA0A1B0GTK5 79 aa4.8□□□□□ -1.64
NR1I3-228ENST00000511676 FAM236CP0DP71 79 aa4.8□□□□□ -1.64
NR1I3-228ENST00000511676 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
NR1I3-228ENST00000511676 SPINK7P58062 85 aa4.77□□□□□ -1.65
NR1I3-228ENST00000511676 A8MUN3 132 aa4.76□□□□□ -1.65
NR1I3-228ENST00000511676 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
NR1I3-228ENST00000511676 HRES1P13985 223 aa4.75□□□□□ -1.65
NR1I3-228ENST00000511676 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
NR1I3-228ENST00000511676 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
NR1I3-228ENST00000511676 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
NR1I3-228ENST00000511676 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
NR1I3-228ENST00000511676 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
NR1I3-228ENST00000511676 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
NR1I3-228ENST00000511676 ACYP2P14621 99 aa4.7□□□□□ -1.66
NR1I3-228ENST00000511676 M0R2T5 61 aa4.69□□□□□ -1.66
NR1I3-228ENST00000511676 COX6B2Q6YFQ2 88 aa4.69□□□□□ -1.66
NR1I3-228ENST00000511676 MPLKIPQ8TAP9 179 aa4.68□□□□□ -1.66
NR1I3-228ENST00000511676 C4orf26Q17RF5 130 aa4.66□□□□□ -1.66
NR1I3-228ENST00000511676 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
NR1I3-228ENST00000511676 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
NR1I3-228ENST00000511676 COA5Q86WW8 74 aa4.64□□□□□ -1.67
NR1I3-228ENST00000511676 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
NR1I3-228ENST00000511676 SPTSSBQ8NFR3 76 aa4.6□□□□□ -1.67
NR1I3-228ENST00000511676 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
NR1I3-228ENST00000511676 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
NR1I3-228ENST00000511676 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
NR1I3-228ENST00000511676 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
NR1I3-228ENST00000511676 MT1HP80294 61 aa4.58□□□□□ -1.68
NR1I3-228ENST00000511676 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
NR1I3-228ENST00000511676 V9GYY9 64 aa4.56□□□□□ -1.68
NR1I3-228ENST00000511676 FSIP2Q5CZC0 6907 aa4.55□□□□□ -1.68
NR1I3-228ENST00000511676 KRTAP10-6P60371 365 aaPredicted RBP4.54□□□□□ -1.68
NR1I3-228ENST00000511676 Q1T7F1 81 aa4.52□□□□□ -1.69
NR1I3-228ENST00000511676 S4R3F8 94 aa4.52□□□□□ -1.69
NR1I3-228ENST00000511676 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
NR1I3-228ENST00000511676 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
NR1I3-228ENST00000511676 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
NR1I3-228ENST00000511676 LINC01558Q9Y6Z2 57 aa4.49□□□□□ -1.69
NR1I3-228ENST00000511676 LCA10Q71F78 164 aa4.48□□□□□ -1.69
NR1I3-228ENST00000511676 CSAG1Q6PB30 78 aa4.45□□□□□ -1.7
NR1I3-228ENST00000511676 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
NR1I3-228ENST00000511676 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
NR1I3-228ENST00000511676 H0YAA0 97 aa4.43□□□□□ -1.7
NR1I3-228ENST00000511676 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
NR1I3-228ENST00000511676 SEC61GP60059 68 aa4.42□□□□□ -1.7
NR1I3-228ENST00000511676 A0A1B0GU69 56 aa4.4□□□□□ -1.71
NR1I3-228ENST00000511676 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
NR1I3-228ENST00000511676 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
NR1I3-228ENST00000511676 Q5VV11 94 aa4.35□□□□□ -1.71
NR1I3-228ENST00000511676 PSPHP1O15172 72 aa4.33□□□□□ -1.72
NR1I3-228ENST00000511676 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
NR1I3-228ENST00000511676 UQCR11O14957 56 aa4.3□□□□□ -1.72
NR1I3-228ENST00000511676 KRTAP10-10P60014 251 aa4.29□□□□□ -1.72
NR1I3-228ENST00000511676 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
NR1I3-228ENST00000511676 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
NR1I3-228ENST00000511676 A0A1B0GU33 70 aa4.27□□□□□ -1.73
NR1I3-228ENST00000511676 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
NR1I3-228ENST00000511676 A6NED7 52 aa4.25□□□□□ -1.73
NR1I3-228ENST00000511676 M0QZ58 72 aa4.25□□□□□ -1.73
NR1I3-228ENST00000511676 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
NR1I3-228ENST00000511676 P0C880 135 aa4.23□□□□□ -1.73
NR1I3-228ENST00000511676 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
NR1I3-228ENST00000511676 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
NR1I3-228ENST00000511676 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
NR1I3-228ENST00000511676 MT2AP02795 61 aa4.2□□□□□ -1.74
NR1I3-228ENST00000511676 R4GN34 69 aa4.18□□□□□ -1.74
NR1I3-228ENST00000511676 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
NR1I3-228ENST00000511676 MT1FP04733 61 aa4.14□□□□□ -1.75
NR1I3-228ENST00000511676 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
NR1I3-228ENST00000511676 A6NN06 94 aa4.13□□□□□ -1.75
NR1I3-228ENST00000511676 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
NR1I3-228ENST00000511676 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
NR1I3-228ENST00000511676 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
NR1I3-228ENST00000511676 K7ERS5 55 aa4.09□□□□□ -1.75
NR1I3-228ENST00000511676 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
NR1I3-228ENST00000511676 USH2AO75445 5202 aa4.09□□□□□ -1.76
NR1I3-228ENST00000511676 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
NR1I3-228ENST00000511676 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
NR1I3-228ENST00000511676 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
NR1I3-228ENST00000511676 A8MU10 97 aa4.05□□□□□ -1.76
NR1I3-228ENST00000511676 A0A0D9SG42 100 aa4.02□□□□□ -1.77
NR1I3-228ENST00000511676 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
NR1I3-228ENST00000511676 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
NR1I3-228ENST00000511676 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
NR1I3-228ENST00000511676 LINC01554Q52M75 96 aa4□□□□□ -1.77
NR1I3-228ENST00000511676 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
NR1I3-228ENST00000511676 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
NR1I3-228ENST00000511676 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
NR1I3-228ENST00000511676 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
NR1I3-228ENST00000511676 MT1BP07438 61 aa3.89□□□□□ -1.79
NR1I3-228ENST00000511676 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
NR1I3-228ENST00000511676 ROMO1P60602 79 aa3.87□□□□□ -1.79
NR1I3-228ENST00000511676 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
NR1I3-228ENST00000511676 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
NR1I3-228ENST00000511676 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
NR1I3-228ENST00000511676 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
NR1I3-228ENST00000511676 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
NR1I3-228ENST00000511676 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms