RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TRBV7-4A0A0J9YYF1 115 aa1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 ETDCA0A1B0GVM5 59 aa1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 SPRR1AP35321 89 aa1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 RBM3P98179 157 aaKnown RBP1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 DSCR8Q96T75 97 aa1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 UBL5Q9BZL1 73 aa1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 LINC00846Q9NV44 126 aa1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 HYDINQ4G0P3 5121 aa1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 VPS13DQ5THJ4 4388 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 EPPK1P58107 5090 aaKnown RBP1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 TGP01266 2768 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 TENM2Q9NT68 2774 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 DNAH1Q9P2D7 4330 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 PLECQ15149 4684 aaKnown RBP1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 A0A087WTM6 91 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 A0A096LNI7 61 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 Q6ZRX8 168 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 LINC00474Q9P2X8 69 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 COL7A1Q02388 2944 aa1.1□□□□□ -2.23
HMGB1P47-201ENST00000511281 STARD9Q9P2P6 4700 aa1.09□□□□□ -2.23
HMGB1P47-201ENST00000511281 ATOX1O00244 68 aa1.09□□□□□ -2.23
HMGB1P47-201ENST00000511281 DEFB105AQ8NG35 78 aa1.09□□□□□ -2.23
HMGB1P47-201ENST00000511281 DNAH7Q8WXX0 4024 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 DNAH11Q96DT5 4516 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 RYR2Q92736 4967 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 KMT2AQ03164 3969 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 A0A087WVE0 104 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 F8WEM9 126 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 BCE1O60756 84 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 HAMPP81172 84 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 PRLHP81277 87 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 SERP2Q8N6R1 65 aa1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 DYNC2H1Q8NCM8 4307 aaKnown RBP1.08□□□□□ -2.24
HMGB1P47-201ENST00000511281 SPRR1BP22528 89 aa1.07□□□□□ -2.24
HMGB1P47-201ENST00000511281 NREPQ16612 68 aa1.07□□□□□ -2.24
HMGB1P47-201ENST00000511281 C9orf153Q5TBE3 101 aa1.07□□□□□ -2.24
HMGB1P47-201ENST00000511281 SPRR4Q96PI1 79 aa1.07□□□□□ -2.24
HMGB1P47-201ENST00000511281 PLAC8Q9NZF1 115 aa1.07□□□□□ -2.24
HMGB1P47-201ENST00000511281 BIRC6Q9NR09 4857 aa1.07□□□□□ -2.24
HMGB1P47-201ENST00000511281 DNAH10Q8IVF4 4471 aa1.07□□□□□ -2.24
HMGB1P47-201ENST00000511281 DNAH17Q9UFH2 4485 aa1.07□□□□□ -2.24
HMGB1P47-201ENST00000511281 FRAS1Q86XX4 4008 aa1.06□□□□□ -2.24
HMGB1P47-201ENST00000511281 SACSQ9NZJ4 4579 aa1.06□□□□□ -2.24
HMGB1P47-201ENST00000511281 C20orf197Q8N268 126 aa1.06□□□□□ -2.24
HMGB1P47-201ENST00000511281 ALMS1Q8TCU4 4167 aa1.06□□□□□ -2.24
HMGB1P47-201ENST00000511281 LRP1BQ9NZR2 4599 aa1.05□□□□□ -2.24
HMGB1P47-201ENST00000511281 HCG22E2RYF7 251 aa1.05□□□□□ -2.24
HMGB1P47-201ENST00000511281 K7EQZ3 153 aa1.05□□□□□ -2.24
HMGB1P47-201ENST00000511281 SPATA8Q6RVD6 105 aa1.05□□□□□ -2.24
HMGB1P47-201ENST00000511281 LINC00472Q9H8W2 130 aa1.05□□□□□ -2.24
HMGB1P47-201ENST00000511281 DNAH2Q9P225 4427 aa1.05□□□□□ -2.24
HMGB1P47-201ENST00000511281 PCLOQ9Y6V0 5065 aa1.04□□□□□ -2.24
HMGB1P47-201ENST00000511281 HECTD4Q9Y4D8 3996 aa1.04□□□□□ -2.24
HMGB1P47-201ENST00000511281 DYNC1H1Q14204 4646 aaKnown RBP1.04□□□□□ -2.24
HMGB1P47-201ENST00000511281 H7BZZ5 65 aa1.04□□□□□ -2.24
HMGB1P47-201ENST00000511281 NDUFC1O43677 76 aa1.04□□□□□ -2.24
HMGB1P47-201ENST00000511281 DNAH6Q9C0G6 4158 aa1.04□□□□□ -2.24
HMGB1P47-201ENST00000511281 FAT1Q14517 4588 aa1.03□□□□□ -2.24
HMGB1P47-201ENST00000511281 DNAH8Q96JB1 4490 aa1.03□□□□□ -2.24
HMGB1P47-201ENST00000511281 NDUFB1O75438 58 aa1.03□□□□□ -2.24
HMGB1P47-201ENST00000511281 SMR3BP02814 79 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P47-201ENST00000511281 ATP5EP56381 51 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P47-201ENST00000511281 WFDC13Q8IUB5 93 aa1.03□□□□□ -2.24
HMGB1P47-201ENST00000511281 FAT2Q9NYQ8 4349 aa1.03□□□□□ -2.24
HMGB1P47-201ENST00000511281 HERC2O95714 4834 aa1.02□□□□□ -2.25
HMGB1P47-201ENST00000511281 MMP24-AS1A0A0U1RRL7 71 aa1.02□□□□□ -2.25
HMGB1P47-201ENST00000511281 KIAA1109Q2LD37 5005 aa1.02□□□□□ -2.25
HMGB1P47-201ENST00000511281 Q5VSD8 79 aa1.02□□□□□ -2.25
HMGB1P47-201ENST00000511281 SSBP3-AS1Q7Z2R9 100 aa1.02□□□□□ -2.25
HMGB1P47-201ENST00000511281 Q96NJ1 140 aa1.02□□□□□ -2.25
HMGB1P47-201ENST00000511281 SERP1Q9Y6X1 66 aa1.02□□□□□ -2.25
HMGB1P47-201ENST00000511281 PKHD1P08F94 4074 aa1.02□□□□□ -2.25
HMGB1P47-201ENST00000511281 H0Y9P7 68 aa1.01□□□□□ -2.25
HMGB1P47-201ENST00000511281 CYP4F30PQ9H0H9 118 aa1.01□□□□□ -2.25
HMGB1P47-201ENST00000511281 DNAH5Q8TE73 4624 aa1.01□□□□□ -2.25
HMGB1P47-201ENST00000511281 APOBP04114 4563 aaKnown RBP1.01□□□□□ -2.25
HMGB1P47-201ENST00000511281 HSPG2P98160 4391 aa1□□□□□ -2.25
HMGB1P47-201ENST00000511281 TRAV22A0A0B4J277 110 aa1□□□□□ -2.25
HMGB1P47-201ENST00000511281 SPINK6Q6UWN8 80 aa1□□□□□ -2.25
HMGB1P47-201ENST00000511281 MRPL34Q9BQ48 92 aaKnown RBP1□□□□□ -2.25
HMGB1P47-201ENST00000511281 TP53AIP1Q9HCN2 124 aa1□□□□□ -2.25
HMGB1P47-201ENST00000511281 PKD1P98161 4303 aa1□□□□□ -2.25
HMGB1P47-201ENST00000511281 SPINK1P00995 79 aa0.99□□□□□ -2.25
HMGB1P47-201ENST00000511281 SPINK7P58062 85 aa0.99□□□□□ -2.25
HMGB1P47-201ENST00000511281 RPS29P62273 56 aaKnown RBP0.99□□□□□ -2.25
HMGB1P47-201ENST00000511281 SPAG11AQ6PDA7 123 aa0.99□□□□□ -2.25
HMGB1P47-201ENST00000511281 SRRM2Q9UQ35 2752 aaKnown RBP0.99□□□□□ -2.25
HMGB1P47-201ENST00000511281 ABCA13Q86UQ4 5058 aa0.99□□□□□ -2.25
HMGB1P47-201ENST00000511281 PKHD1L1Q86WI1 4243 aa0.98□□□□□ -2.25
HMGB1P47-201ENST00000511281 VPS13BQ7Z7G8 4022 aa0.98□□□□□ -2.25
HMGB1P47-201ENST00000511281 MT1HL1P0DM35 61 aa0.98□□□□□ -2.25
HMGB1P47-201ENST00000511281 RYR1P21817 5038 aa0.98□□□□□ -2.25
HMGB1P47-201ENST00000511281 SPTSSBQ8NFR3 76 aa0.97□□□□□ -2.25
HMGB1P47-201ENST00000511281 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
HMGB1P47-201ENST00000511281 MYCBP2O75592 4640 aa0.96□□□□□ -2.25
HMGB1P47-201ENST00000511281 FAT3Q8TDW7 4589 aa0.95□□□□□ -2.26
HMGB1P47-201ENST00000511281 DMBT1Q9UGM3 2413 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P47-201ENST00000511281 HMCN1Q96RW7 5635 aa0.94□□□□□ -2.26
HMGB1P47-201ENST00000511281 CHKB-CPT1BH3BT56 60 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms