RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CSAG1Q6PB30 78 aa6.49□□□□□ -1.37
DDX41-212ENST00000511040 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
DDX41-212ENST00000511040 LINC00208Q96KT6 92 aa6.48□□□□□ -1.37
DDX41-212ENST00000511040 SMIM20Q8N5G0 67 aa6.47□□□□□ -1.37
DDX41-212ENST00000511040 SERP2Q8N6R1 65 aa6.47□□□□□ -1.37
DDX41-212ENST00000511040 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
DDX41-212ENST00000511040 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
DDX41-212ENST00000511040 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
DDX41-212ENST00000511040 MP68P56378 58 aa6.44□□□□□ -1.38
DDX41-212ENST00000511040 FCGBPQ9Y6R7 5405 aaPredicted RBP6.42□□□□□ -1.38
DDX41-212ENST00000511040 COX7CP15954 63 aa6.41□□□□□ -1.38
DDX41-212ENST00000511040 ANAPC13Q9BS18 74 aa6.4□□□□□ -1.38
DDX41-212ENST00000511040 H3BPC8 53 aa6.39□□□□□ -1.39
DDX41-212ENST00000511040 C20orf197Q8N268 126 aa6.39□□□□□ -1.39
DDX41-212ENST00000511040 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
DDX41-212ENST00000511040 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
DDX41-212ENST00000511040 MACF1Q9UPN3 7388 aaKnown RBP6.37□□□□□ -1.39
DDX41-212ENST00000511040 CCDC179H3BU77 68 aa6.36□□□□□ -1.39
DDX41-212ENST00000511040 A8MUN3 132 aa6.34□□□□□ -1.39
DDX41-212ENST00000511040 NDUFC1O43677 76 aa6.34□□□□□ -1.39
DDX41-212ENST00000511040 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
DDX41-212ENST00000511040 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
DDX41-212ENST00000511040 H7BZZ5 65 aa6.25□□□□□ -1.41
DDX41-212ENST00000511040 MT1BP07438 61 aa6.23□□□□□ -1.41
DDX41-212ENST00000511040 Q5VV11 94 aa6.23□□□□□ -1.41
DDX41-212ENST00000511040 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
DDX41-212ENST00000511040 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
DDX41-212ENST00000511040 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
DDX41-212ENST00000511040 H0YAA0 97 aa6.2□□□□□ -1.42
DDX41-212ENST00000511040 PCP4P48539 62 aa6.19□□□□□ -1.42
DDX41-212ENST00000511040 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
DDX41-212ENST00000511040 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
DDX41-212ENST00000511040 NEBP20929 6669 aa6.14□□□□□ -1.43
DDX41-212ENST00000511040 A6NN06 94 aa6.11□□□□□ -1.43
DDX41-212ENST00000511040 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
DDX41-212ENST00000511040 P0C880 135 aa6.1□□□□□ -1.43
DDX41-212ENST00000511040 ACYP2P14621 99 aa6.1□□□□□ -1.43
DDX41-212ENST00000511040 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
DDX41-212ENST00000511040 TMEM258P61165 79 aa6.03□□□□□ -1.44
DDX41-212ENST00000511040 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
DDX41-212ENST00000511040 CHKB-CPT1BH3BT56 60 aa6.02□□□□□ -1.45
DDX41-212ENST00000511040 COA5Q86WW8 74 aa6.02□□□□□ -1.45
DDX41-212ENST00000511040 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
DDX41-212ENST00000511040 R4GN34 69 aa6.01□□□□□ -1.45
DDX41-212ENST00000511040 M0QZ58 72 aa6□□□□□ -1.45
DDX41-212ENST00000511040 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
DDX41-212ENST00000511040 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
DDX41-212ENST00000511040 MUC12Q9UKN1 5478 aa5.97□□□□□ -1.45
DDX41-212ENST00000511040 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
DDX41-212ENST00000511040 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
DDX41-212ENST00000511040 MT1XP80297 61 aa5.88□□□□□ -1.47
DDX41-212ENST00000511040 SERP1Q9Y6X1 66 aa5.86□□□□□ -1.47
DDX41-212ENST00000511040 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
DDX41-212ENST00000511040 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
DDX41-212ENST00000511040 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
DDX41-212ENST00000511040 KMT2DO14686 5537 aa5.72□□□□□ -1.49
DDX41-212ENST00000511040 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
DDX41-212ENST00000511040 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
DDX41-212ENST00000511040 SEC61GP60059 68 aa5.68□□□□□ -1.5
DDX41-212ENST00000511040 GPR98Q8WXG9 6306 aa5.68□□□□□ -1.5
DDX41-212ENST00000511040 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
DDX41-212ENST00000511040 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
DDX41-212ENST00000511040 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
DDX41-212ENST00000511040 A0A1B0GU69 56 aa5.63□□□□□ -1.51
DDX41-212ENST00000511040 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
DDX41-212ENST00000511040 Q1T7F1 81 aa5.63□□□□□ -1.51
DDX41-212ENST00000511040 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
DDX41-212ENST00000511040 A0A0D9SG42 100 aa5.61□□□□□ -1.51
DDX41-212ENST00000511040 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
DDX41-212ENST00000511040 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
DDX41-212ENST00000511040 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
DDX41-212ENST00000511040 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
DDX41-212ENST00000511040 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
DDX41-212ENST00000511040 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
DDX41-212ENST00000511040 A0A1B0GU33 70 aa5.59□□□□□ -1.51
DDX41-212ENST00000511040 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
DDX41-212ENST00000511040 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
DDX41-212ENST00000511040 PSPHP1O15172 72 aa5.56□□□□□ -1.52
DDX41-212ENST00000511040 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
DDX41-212ENST00000511040 V9GYY9 64 aa5.53□□□□□ -1.52
DDX41-212ENST00000511040 SPRR2EP22531 72 aa5.5□□□□□ -1.53
DDX41-212ENST00000511040 SPRR2BP35325 72 aa5.5□□□□□ -1.53
DDX41-212ENST00000511040 SPRR2AP35326 72 aa5.5□□□□□ -1.53
DDX41-212ENST00000511040 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
DDX41-212ENST00000511040 A8MU10 97 aa5.46□□□□□ -1.54
DDX41-212ENST00000511040 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
DDX41-212ENST00000511040 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
DDX41-212ENST00000511040 UQCR11O14957 56 aa5.4□□□□□ -1.54
DDX41-212ENST00000511040 KRTAP2-2Q9BYT5 123 aa5.37□□□□□ -1.55
DDX41-212ENST00000511040 KRTAP2-1Q9BYU5 128 aa5.37□□□□□ -1.55
DDX41-212ENST00000511040 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
DDX41-212ENST00000511040 A6NED7 52 aa5.33□□□□□ -1.56
DDX41-212ENST00000511040 SPRR2DP22532 72 aa5.31□□□□□ -1.56
DDX41-212ENST00000511040 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
DDX41-212ENST00000511040 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
DDX41-212ENST00000511040 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
DDX41-212ENST00000511040 MT1EP04732 61 aa5.19□□□□□ -1.58
DDX41-212ENST00000511040 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
DDX41-212ENST00000511040 TNP1P09430 55 aa5.15□□□□□ -1.59
DDX41-212ENST00000511040 LCE3BQ5TA77 95 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms