RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 RETNLBQ9BQ08 111 aa5□□□□□ -1.61
SEC24D-209ENST00000509818 LINC01554Q52M75 96 aa5□□□□□ -1.61
SEC24D-209ENST00000509818 A0A1B0GU69 56 aa4.99□□□□□ -1.61
SEC24D-209ENST00000509818 SPATA8Q6RVD6 105 aa4.99□□□□□ -1.61
SEC24D-209ENST00000509818 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
SEC24D-209ENST00000509818 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
SEC24D-209ENST00000509818 C9orf92A6NGG3 77 aa4.98□□□□□ -1.61
SEC24D-209ENST00000509818 A8MUU9 505 aa4.96□□□□□ -1.61
SEC24D-209ENST00000509818 UQCR11O14957 56 aa4.96□□□□□ -1.61
SEC24D-209ENST00000509818 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.61
SEC24D-209ENST00000509818 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.62
SEC24D-209ENST00000509818 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
SEC24D-209ENST00000509818 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
SEC24D-209ENST00000509818 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
SEC24D-209ENST00000509818 PRAC1Q96KF2 57 aa4.9□□□□□ -1.62
SEC24D-209ENST00000509818 LRP2P98164 4655 aa4.88□□□□□ -1.63
SEC24D-209ENST00000509818 ADM2Q7Z4H4 148 aa4.83□□□□□ -1.64
SEC24D-209ENST00000509818 RNF213Q63HN8 5207 aa4.83□□□□□ -1.64
SEC24D-209ENST00000509818 RPL37P61927 97 aaKnown RBP4.83□□□□□ -1.64
SEC24D-209ENST00000509818 XP32Q5T750 250 aa4.82□□□□□ -1.64
SEC24D-209ENST00000509818 LPAP08519 4548 aa4.81□□□□□ -1.64
SEC24D-209ENST00000509818 CSAG1Q6PB30 78 aa4.8□□□□□ -1.64
SEC24D-209ENST00000509818 TPRXLQ17RH7 258 aa4.78□□□□□ -1.64
SEC24D-209ENST00000509818 COX6B2Q6YFQ2 88 aa4.73□□□□□ -1.65
SEC24D-209ENST00000509818 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
SEC24D-209ENST00000509818 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
SEC24D-209ENST00000509818 LCE2BO14633 110 aa4.69□□□□□ -1.66
SEC24D-209ENST00000509818 MUC2Q02817 5179 aa4.68□□□□□ -1.66
SEC24D-209ENST00000509818 K7ERS5 55 aa4.68□□□□□ -1.66
SEC24D-209ENST00000509818 ROMO1P60602 79 aa4.66□□□□□ -1.66
SEC24D-209ENST00000509818 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
SEC24D-209ENST00000509818 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
SEC24D-209ENST00000509818 A0A1B0GU33 70 aa4.64□□□□□ -1.67
SEC24D-209ENST00000509818 H0YAA0 97 aa4.63□□□□□ -1.67
SEC24D-209ENST00000509818 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
SEC24D-209ENST00000509818 LCE2AQ5TA79 106 aaPredicted RBP4.62□□□□□ -1.67
SEC24D-209ENST00000509818 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
SEC24D-209ENST00000509818 S4R3F8 94 aa4.58□□□□□ -1.68
SEC24D-209ENST00000509818 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
SEC24D-209ENST00000509818 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
SEC24D-209ENST00000509818 KRTAP4-1Q9BYQ7 146 aa4.47□□□□□ -1.69
SEC24D-209ENST00000509818 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
SEC24D-209ENST00000509818 P0C880 135 aa4.43□□□□□ -1.7
SEC24D-209ENST00000509818 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
SEC24D-209ENST00000509818 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
SEC24D-209ENST00000509818 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
SEC24D-209ENST00000509818 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
SEC24D-209ENST00000509818 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
SEC24D-209ENST00000509818 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
SEC24D-209ENST00000509818 CRIPTQ9P021 101 aa4.37□□□□□ -1.71
SEC24D-209ENST00000509818 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SEC24D-209ENST00000509818 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
SEC24D-209ENST00000509818 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
SEC24D-209ENST00000509818 M0QZ58 72 aa4.29□□□□□ -1.72
SEC24D-209ENST00000509818 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
SEC24D-209ENST00000509818 A0A0D9SG42 100 aa4.26□□□□□ -1.73
SEC24D-209ENST00000509818 FLGP20930 4061 aaPredicted RBP4.22□□□□□ -1.73
SEC24D-209ENST00000509818 R4GN34 69 aa4.22□□□□□ -1.73
SEC24D-209ENST00000509818 MT1HP80294 61 aa4.21□□□□□ -1.74
SEC24D-209ENST00000509818 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
SEC24D-209ENST00000509818 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
SEC24D-209ENST00000509818 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
SEC24D-209ENST00000509818 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
SEC24D-209ENST00000509818 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.74
SEC24D-209ENST00000509818 M0R2T5 61 aa4.14□□□□□ -1.75
SEC24D-209ENST00000509818 CRCT1Q9UGL9 99 aa4.05□□□□□ -1.76
SEC24D-209ENST00000509818 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
SEC24D-209ENST00000509818 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
SEC24D-209ENST00000509818 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
SEC24D-209ENST00000509818 MT2AP02795 61 aa4.01□□□□□ -1.77
SEC24D-209ENST00000509818 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
SEC24D-209ENST00000509818 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
SEC24D-209ENST00000509818 KRTAP9-8Q9BYQ0 159 aa4.01□□□□□ -1.77
SEC24D-209ENST00000509818 USH2AO75445 5202 aa3.99□□□□□ -1.77
SEC24D-209ENST00000509818 MT1FP04733 61 aa3.98□□□□□ -1.77
SEC24D-209ENST00000509818 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
SEC24D-209ENST00000509818 KRTAP19-1Q8IUB9 90 aa3.96□□□□□ -1.77
SEC24D-209ENST00000509818 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
SEC24D-209ENST00000509818 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
SEC24D-209ENST00000509818 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
SEC24D-209ENST00000509818 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
SEC24D-209ENST00000509818 MT1BP07438 61 aa3.81□□□□□ -1.8
SEC24D-209ENST00000509818 TNP1P09430 55 aa3.81□□□□□ -1.8
SEC24D-209ENST00000509818 KRTAP4-8Q9BYQ9 185 aa3.8□□□□□ -1.8
SEC24D-209ENST00000509818 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
SEC24D-209ENST00000509818 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
SEC24D-209ENST00000509818 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
SEC24D-209ENST00000509818 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
SEC24D-209ENST00000509818 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.81
SEC24D-209ENST00000509818 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
SEC24D-209ENST00000509818 MT1XP80297 61 aa3.71□□□□□ -1.82
SEC24D-209ENST00000509818 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
SEC24D-209ENST00000509818 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
SEC24D-209ENST00000509818 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
SEC24D-209ENST00000509818 KRTAP4-8A0A0G2JLE6 195 aa3.62□□□□□ -1.83
SEC24D-209ENST00000509818 INE1O15225 51 aa3.62□□□□□ -1.83
SEC24D-209ENST00000509818 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
SEC24D-209ENST00000509818 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
SEC24D-209ENST00000509818 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
SEC24D-209ENST00000509818 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms