RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 A8MUN3 132 aa9.45□□□□□ -0.9
HOXC6-204ENST00000509328 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
HOXC6-204ENST00000509328 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
HOXC6-204ENST00000509328 LCE2BO14633 110 aa9.39□□□□□ -0.91
HOXC6-204ENST00000509328 USH2AO75445 5202 aa9.38□□□□□ -0.91
HOXC6-204ENST00000509328 NDUFC1O43677 76 aa9.33□□□□□ -0.92
HOXC6-204ENST00000509328 DMAC1Q96GE9 116 aa9.28□□□□□ -0.92
HOXC6-204ENST00000509328 SSPOA2VEC9 5147 aa9.22□□□□□ -0.93
HOXC6-204ENST00000509328 SERP2Q8N6R1 65 aa9.22□□□□□ -0.93
HOXC6-204ENST00000509328 SNURFQ9Y675 71 aa9.19□□□□□ -0.94
HOXC6-204ENST00000509328 H0YAA0 97 aa9.17□□□□□ -0.94
HOXC6-204ENST00000509328 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
HOXC6-204ENST00000509328 C20orf197Q8N268 126 aa9.15□□□□□ -0.94
HOXC6-204ENST00000509328 ACYP2P14621 99 aa9.12□□□□□ -0.95
HOXC6-204ENST00000509328 SPRR2GQ9BYE4 73 aa9.11□□□□□ -0.95
HOXC6-204ENST00000509328 CRIPTQ9P021 101 aa9.09□□□□□ -0.95
HOXC6-204ENST00000509328 ADM2Q7Z4H4 148 aa9.06□□□□□ -0.96
HOXC6-204ENST00000509328 SPANXA2-OT1Q8N9U9 137 aa9.05□□□□□ -0.96
HOXC6-204ENST00000509328 KRTAP19-6Q3LI70 58 aa9.03□□□□□ -0.96
HOXC6-204ENST00000509328 COX7CP15954 63 aa9.02□□□□□ -0.97
HOXC6-204ENST00000509328 KRTAP19-8Q3LI54 63 aa9□□□□□ -0.97
HOXC6-204ENST00000509328 FCGBPQ9Y6R7 5405 aaPredicted RBP8.98□□□□□ -0.97
HOXC6-204ENST00000509328 Q5VV11 94 aa8.98□□□□□ -0.97
HOXC6-204ENST00000509328 SPTSSBQ8NFR3 76 aa8.97□□□□□ -0.97
HOXC6-204ENST00000509328 CHKB-CPT1BH3BT56 60 aa8.95□□□□□ -0.98
HOXC6-204ENST00000509328 MT1BP07438 61 aa8.94□□□□□ -0.98
HOXC6-204ENST00000509328 P0C880 135 aa8.89□□□□□ -0.99
HOXC6-204ENST00000509328 ANAPC13Q9BS18 74 aa8.87□□□□□ -0.99
HOXC6-204ENST00000509328 KRTAP3-2Q9BYR7 98 aa8.86□□□□□ -0.99
HOXC6-204ENST00000509328 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.83□□□□□ -1
HOXC6-204ENST00000509328 R4GN34 69 aa8.82□□□□□ -1
HOXC6-204ENST00000509328 H7BZZ5 65 aa8.81□□□□□ -1
HOXC6-204ENST00000509328 CYSTM1Q9H1C7 97 aa8.81□□□□□ -1
HOXC6-204ENST00000509328 M0QZ58 72 aa8.76□□□□□ -1.01
HOXC6-204ENST00000509328 COA5Q86WW8 74 aa8.76□□□□□ -1.01
HOXC6-204ENST00000509328 A6NN06 94 aa8.73□□□□□ -1.01
HOXC6-204ENST00000509328 MACF1Q9UPN3 7388 aaKnown RBP8.69□□□□□ -1.02
HOXC6-204ENST00000509328 KRTAP10-5P60370 271 aa8.68□□□□□ -1.02
HOXC6-204ENST00000509328 CCDC179H3BU77 68 aa8.66□□□□□ -1.02
HOXC6-204ENST00000509328 KRTAP9-7A8MTY7 169 aa8.63□□□□□ -1.03
HOXC6-204ENST00000509328 PLAC4Q8WY50 150 aa8.63□□□□□ -1.03
HOXC6-204ENST00000509328 LINC01554Q52M75 96 aa8.6□□□□□ -1.03
HOXC6-204ENST00000509328 SYNE2Q8WXH0 6885 aaKnown RBP8.57□□□□□ -1.04
HOXC6-204ENST00000509328 SEC61GP60059 68 aa8.52□□□□□ -1.05
HOXC6-204ENST00000509328 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
HOXC6-204ENST00000509328 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
HOXC6-204ENST00000509328 SERP1Q9Y6X1 66 aa8.49□□□□□ -1.05
HOXC6-204ENST00000509328 MT1XP80297 61 aa8.46□□□□□ -1.06
HOXC6-204ENST00000509328 KRTAP13-4Q3LI77 160 aa8.43□□□□□ -1.06
HOXC6-204ENST00000509328 TMEM258P61165 79 aa8.38□□□□□ -1.07
HOXC6-204ENST00000509328 KRTAP6-3Q3LI67 103 aa8.38□□□□□ -1.07
HOXC6-204ENST00000509328 A0A1B0GU33 70 aa8.33□□□□□ -1.08
HOXC6-204ENST00000509328 A0A1B0GU69 56 aa8.32□□□□□ -1.08
HOXC6-204ENST00000509328 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
HOXC6-204ENST00000509328 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
HOXC6-204ENST00000509328 A0A0D9SG42 100 aa8.2□□□□□ -1.1
HOXC6-204ENST00000509328 PRR15LQ9BU68 103 aa8.18□□□□□ -1.1
HOXC6-204ENST00000509328 CAMK2N1Q7Z7J9 78 aa8.16□□□□□ -1.1
HOXC6-204ENST00000509328 LINC01558Q9Y6Z2 57 aa8.16□□□□□ -1.1
HOXC6-204ENST00000509328 KRTAP5-9P26371 169 aa8.12□□□□□ -1.11
HOXC6-204ENST00000509328 SMIM26A0A096LP01 95 aa8.1□□□□□ -1.11
HOXC6-204ENST00000509328 KMT2DO14686 5537 aa8.1□□□□□ -1.11
HOXC6-204ENST00000509328 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
HOXC6-204ENST00000509328 KRTAP10-7P60409 375 aaPredicted RBP8.07□□□□□ -1.12
HOXC6-204ENST00000509328 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
HOXC6-204ENST00000509328 KRTAP10-12P60413 245 aa8.05□□□□□ -1.12
HOXC6-204ENST00000509328 KRTAP8-1Q8IUC2 63 aa8.03□□□□□ -1.12
HOXC6-204ENST00000509328 NEBP20929 6669 aa8.02□□□□□ -1.13
HOXC6-204ENST00000509328 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
HOXC6-204ENST00000509328 A8MU10 97 aa8□□□□□ -1.13
HOXC6-204ENST00000509328 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
HOXC6-204ENST00000509328 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
HOXC6-204ENST00000509328 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
HOXC6-204ENST00000509328 UQCR11O14957 56 aa7.9□□□□□ -1.14
HOXC6-204ENST00000509328 PCP4P48539 62 aa7.89□□□□□ -1.15
HOXC6-204ENST00000509328 V9GYY9 64 aa7.88□□□□□ -1.15
HOXC6-204ENST00000509328 MDN1Q9NU22 5596 aa7.85□□□□□ -1.15
HOXC6-204ENST00000509328 Q1T7F1 81 aa7.83□□□□□ -1.16
HOXC6-204ENST00000509328 PSPHP1O15172 72 aa7.76□□□□□ -1.17
HOXC6-204ENST00000509328 SPRR2EP22531 72 aa7.76□□□□□ -1.17
HOXC6-204ENST00000509328 SPRR2BP35325 72 aa7.76□□□□□ -1.17
HOXC6-204ENST00000509328 SPRR2AP35326 72 aa7.76□□□□□ -1.17
HOXC6-204ENST00000509328 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
HOXC6-204ENST00000509328 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.18
HOXC6-204ENST00000509328 LCE1AQ5T7P2 110 aa7.69□□□□□ -1.18
HOXC6-204ENST00000509328 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
HOXC6-204ENST00000509328 TNP1P09430 55 aa7.61□□□□□ -1.19
HOXC6-204ENST00000509328 KRTAP20-1Q3LI63 56 aa7.6□□□□□ -1.19
HOXC6-204ENST00000509328 K7ERS5 55 aa7.56□□□□□ -1.2
HOXC6-204ENST00000509328 KRTAP19-7Q3SYF9 63 aa7.56□□□□□ -1.2
HOXC6-204ENST00000509328 A6NED7 52 aa7.53□□□□□ -1.2
HOXC6-204ENST00000509328 KRTAP2-3P0C7H8 128 aa7.5□□□□□ -1.21
HOXC6-204ENST00000509328 SPRR2DP22532 72 aa7.5□□□□□ -1.21
HOXC6-204ENST00000509328 KRTAP2-4Q9BYR9 128 aa7.5□□□□□ -1.21
HOXC6-204ENST00000509328 MT1EP04732 61 aa7.48□□□□□ -1.21
HOXC6-204ENST00000509328 KRTAP19-5Q3LI72 72 aa7.45□□□□□ -1.22
HOXC6-204ENST00000509328 LCE3AQ5TA76 89 aa7.44□□□□□ -1.22
HOXC6-204ENST00000509328 KRTAP19-3Q7Z4W3 81 aa7.36□□□□□ -1.23
HOXC6-204ENST00000509328 KRTAP25-1Q3LHN0 102 aa7.34□□□□□ -1.23
HOXC6-204ENST00000509328 LCE5AQ5TCM9 118 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms