RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PREX2Q70Z35 1606 aa-0.02□□□□□ -2.41
DHFR-204ENST00000508282 SYCP2Q9BX26 1530 aa-0.03□□□□□ -2.41
DHFR-204ENST00000508282 NIPBLQ6KC79 2804 aaeCLIP-0.03□□□□□ -2.41
DHFR-204ENST00000508282 C5orf42Q9H799 3197 aa-0.03□□□□□ -2.41
DHFR-204ENST00000508282 EFCAB6Q5THR3 1501 aa-0.03□□□□□ -2.41
DHFR-204ENST00000508282 CUBNO60494 3623 aa-0.04□□□□□ -2.42
DHFR-204ENST00000508282 CRYBG3Q68DQ2 2970 aa-0.04□□□□□ -2.42
DHFR-204ENST00000508282 IGLV5-48A0A075B6I7 105 aa-0.04□□□□□ -2.42
DHFR-204ENST00000508282 KRTAP19-6Q3LI70 58 aa-0.04□□□□□ -2.42
DHFR-204ENST00000508282 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
DHFR-204ENST00000508282 ABRACLQ9P1F3 81 aa-0.04□□□□□ -2.42
DHFR-204ENST00000508282 CSMD2Q7Z408 3487 aa-0.04□□□□□ -2.42
DHFR-204ENST00000508282 CENPFP49454 3210 aa-0.04□□□□□ -2.42
DHFR-204ENST00000508282 TEX15Q9BXT5 2789 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 SRRM2Q9UQ35 2752 aaKnown RBP-0.05□□□□□ -2.42
DHFR-204ENST00000508282 BRCA2P51587 3418 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 AKAP9Q99996 3911 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 LRBAP50851 2863 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 SMIM27A0A1W2PRY6 76 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 SPRR2EP22531 72 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 MT4P47944 62 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 AGLP35573 1532 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 RANBP2P49792 3224 aaKnown RBP-0.05□□□□□ -2.42
DHFR-204ENST00000508282 ITPR2Q14571 2701 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 STARD9Q9P2P6 4700 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 DMXL1Q9Y485 3027 aa-0.05□□□□□ -2.42
DHFR-204ENST00000508282 H0YGX0 51 aa-0.06□□□□□ -2.42
DHFR-204ENST00000508282 NOP10Q9NPE3 64 aaKnown RBP-0.06□□□□□ -2.42
DHFR-204ENST00000508282 MYO15AQ9UKN7 3530 aa-0.06□□□□□ -2.42
DHFR-204ENST00000508282 PKHD1L1Q86WI1 4243 aa-0.06□□□□□ -2.42
DHFR-204ENST00000508282 DMXL2Q8TDJ6 3036 aa-0.07□□□□□ -2.42
DHFR-204ENST00000508282 TACC2O95359 2948 aa-0.07□□□□□ -2.42
DHFR-204ENST00000508282 DNAH9Q9NYC9 4486 aa-0.07□□□□□ -2.42
DHFR-204ENST00000508282 DNAH3Q8TD57 4116 aa-0.08□□□□□ -2.42
DHFR-204ENST00000508282 ADCY10Q96PN6 1610 aa-0.08□□□□□ -2.42
DHFR-204ENST00000508282 KRTAP19-8Q3LI54 63 aa-0.08□□□□□ -2.42
DHFR-204ENST00000508282 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
DHFR-204ENST00000508282 FREM2Q5SZK8 3169 aa-0.08□□□□□ -2.42
DHFR-204ENST00000508282 CEP295Q9C0D2 2601 aa-0.08□□□□□ -2.42
DHFR-204ENST00000508282 UTRNP46939 3433 aa-0.09□□□□□ -2.42
DHFR-204ENST00000508282 PLNP26678 52 aa-0.09□□□□□ -2.42
DHFR-204ENST00000508282 TLN2Q9Y4G6 2542 aa-0.09□□□□□ -2.42
DHFR-204ENST00000508282 SACSQ9NZJ4 4579 aa-0.09□□□□□ -2.42
DHFR-204ENST00000508282 NBPF19A0A087WUL8 3843 aa-0.09□□□□□ -2.42
DHFR-204ENST00000508282 ASPMQ8IZT6 3477 aa-0.1□□□□□ -2.42
DHFR-204ENST00000508282 FAM186AA6NE01 2351 aa-0.1□□□□□ -2.42
DHFR-204ENST00000508282 APOBP04114 4563 aaKnown RBP-0.1□□□□□ -2.43
DHFR-204ENST00000508282 ANK3Q12955 4377 aaKnown RBP-0.1□□□□□ -2.43
DHFR-204ENST00000508282 MMP24-AS1A0A0U1RRL7 71 aa-0.1□□□□□ -2.43
DHFR-204ENST00000508282 MT1AP04731 61 aa-0.1□□□□□ -2.43
DHFR-204ENST00000508282 SPRR2FQ96RM1 72 aa-0.1□□□□□ -2.43
DHFR-204ENST00000508282 USP34Q70CQ2 3546 aa-0.1□□□□□ -2.43
DHFR-204ENST00000508282 ABCA5Q8WWZ7 1642 aa-0.1□□□□□ -2.43
DHFR-204ENST00000508282 CFAP54Q96N23 3096 aa-0.1□□□□□ -2.43
DHFR-204ENST00000508282 WDFY3Q8IZQ1 3526 aa-0.1□□□□□ -2.43
DHFR-204ENST00000508282 DNAH2Q9P225 4427 aa-0.11□□□□□ -2.43
DHFR-204ENST00000508282 TLN1Q9Y490 2541 aaKnown RBP-0.11□□□□□ -2.43
DHFR-204ENST00000508282 LMO7Q8WWI1 1683 aa-0.11□□□□□ -2.43
DHFR-204ENST00000508282 HTTP42858 3142 aa-0.11□□□□□ -2.43
DHFR-204ENST00000508282 MGAQ8IWI9 3026 aa-0.12□□□□□ -2.43
DHFR-204ENST00000508282 M0QY20 66 aa-0.12□□□□□ -2.43
DHFR-204ENST00000508282 TNP1P09430 55 aa-0.12□□□□□ -2.43
DHFR-204ENST00000508282 KRTAP20-2Q3LI61 65 aa-0.12□□□□□ -2.43
DHFR-204ENST00000508282 CMC2Q9NRP2 79 aa-0.12□□□□□ -2.43
DHFR-204ENST00000508282 FAT1Q14517 4588 aa-0.13□□□□□ -2.43
DHFR-204ENST00000508282 DDX60Q8IY21 1712 aaKnown RBP-0.13□□□□□ -2.43
DHFR-204ENST00000508282 LOC400499M0QZD8 3231 aa-0.13□□□□□ -2.43
DHFR-204ENST00000508282 FAM208AQ9UK61 1670 aaKnown RBP-0.13□□□□□ -2.43
DHFR-204ENST00000508282 FANCD2Q9BXW9 1451 aa-0.13□□□□□ -2.43
DHFR-204ENST00000508282 SNRPGP15A8MWD9 76 aa-0.13□□□□□ -2.43
DHFR-204ENST00000508282 SMIM2Q9BVW6 85 aa-0.13□□□□□ -2.43
DHFR-204ENST00000508282 FRYLO94915 3013 aa-0.13□□□□□ -2.43
DHFR-204ENST00000508282 CEP250Q9BV73 2442 aa-0.13□□□□□ -2.43
DHFR-204ENST00000508282 VPS13DQ5THJ4 4388 aa-0.13□□□□□ -2.43
DHFR-204ENST00000508282 ADGRG4Q8IZF6 3080 aa-0.14□□□□□ -2.43
DHFR-204ENST00000508282 ACACAQ13085 2346 aa-0.14□□□□□ -2.43
DHFR-204ENST00000508282 SPTBN5Q9NRC6 3674 aaKnown RBP-0.14□□□□□ -2.43
DHFR-204ENST00000508282 FRYQ5TBA9 3013 aa-0.14□□□□□ -2.43
DHFR-204ENST00000508282 TRIOO75962 3097 aa-0.14□□□□□ -2.43
DHFR-204ENST00000508282 NFAT5O94916 1531 aa-0.14□□□□□ -2.43
DHFR-204ENST00000508282 IQGAP1P46940 1657 aa-0.14□□□□□ -2.43
DHFR-204ENST00000508282 ABCC8Q09428 1581 aa-0.15□□□□□ -2.43
DHFR-204ENST00000508282 DNAH14Q0VDD8 3507 aa-0.15□□□□□ -2.43
DHFR-204ENST00000508282 NRXN3Q9Y4C0 1643 aa-0.15□□□□□ -2.43
DHFR-204ENST00000508282 DNAH11Q96DT5 4516 aa-0.15□□□□□ -2.43
DHFR-204ENST00000508282 DNAH6Q9C0G6 4158 aa-0.15□□□□□ -2.43
DHFR-204ENST00000508282 SMR3BP02814 79 aaPredicted RBP-0.15□□□□□ -2.43
DHFR-204ENST00000508282 POLR2KP53803 58 aaKnown RBP-0.15□□□□□ -2.43
DHFR-204ENST00000508282 CLPSL2Q6UWE3 100 aa-0.15□□□□□ -2.43
DHFR-204ENST00000508282 KIF21BO75037 1637 aa-0.16□□□□□ -2.43
DHFR-204ENST00000508282 ATMQ13315 3056 aa-0.16□□□□□ -2.43
DHFR-204ENST00000508282 SPART-AS1P0CW21 52 aa-0.16□□□□□ -2.44
DHFR-204ENST00000508282 DEFB1P60022 68 aa-0.16□□□□□ -2.44
DHFR-204ENST00000508282 KRTAP19-5Q3LI72 72 aa-0.16□□□□□ -2.44
DHFR-204ENST00000508282 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.16□□□□□ -2.44
DHFR-204ENST00000508282 SPENQ96T58 3664 aaKnown RBP-0.16□□□□□ -2.44
DHFR-204ENST00000508282 LINC01546A6NGU7 62 aa-0.17□□□□□ -2.44
DHFR-204ENST00000508282 M0QZ58 72 aa-0.17□□□□□ -2.44
DHFR-204ENST00000508282 DNAH1Q9P2D7 4330 aa-0.17□□□□□ -2.44
DHFR-204ENST00000508282 DNAH8Q96JB1 4490 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms