RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
RNF4-210ENST00000508235 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
RNF4-210ENST00000508235 CRCT1Q9UGL9 99 aa7.04□□□□□ -1.28
RNF4-210ENST00000508235 NDUFC1O43677 76 aa7.01□□□□□ -1.29
RNF4-210ENST00000508235 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
RNF4-210ENST00000508235 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
RNF4-210ENST00000508235 LCE2BO14633 110 aa6.94□□□□□ -1.3
RNF4-210ENST00000508235 SERP2Q8N6R1 65 aa6.94□□□□□ -1.3
RNF4-210ENST00000508235 H0YAA0 97 aa6.87□□□□□ -1.31
RNF4-210ENST00000508235 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
RNF4-210ENST00000508235 ACYP2P14621 99 aa6.86□□□□□ -1.31
RNF4-210ENST00000508235 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
RNF4-210ENST00000508235 CRIPTQ9P021 101 aa6.82□□□□□ -1.32
RNF4-210ENST00000508235 SPANXA2-OT1Q8N9U9 137 aa6.8□□□□□ -1.32
RNF4-210ENST00000508235 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
RNF4-210ENST00000508235 COX7CP15954 63 aa6.78□□□□□ -1.32
RNF4-210ENST00000508235 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
RNF4-210ENST00000508235 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
RNF4-210ENST00000508235 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
RNF4-210ENST00000508235 USH2AO75445 5202 aa6.75□□□□□ -1.33
RNF4-210ENST00000508235 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
RNF4-210ENST00000508235 Q5VV11 94 aa6.71□□□□□ -1.34
RNF4-210ENST00000508235 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
RNF4-210ENST00000508235 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
RNF4-210ENST00000508235 ANAPC13Q9BS18 74 aa6.69□□□□□ -1.34
RNF4-210ENST00000508235 SSPOA2VEC9 5147 aa6.65□□□□□ -1.35
RNF4-210ENST00000508235 MT1BP07438 61 aa6.63□□□□□ -1.35
RNF4-210ENST00000508235 H7BZZ5 65 aa6.61□□□□□ -1.35
RNF4-210ENST00000508235 P0C880 135 aa6.61□□□□□ -1.35
RNF4-210ENST00000508235 R4GN34 69 aa6.61□□□□□ -1.35
RNF4-210ENST00000508235 COA5Q86WW8 74 aa6.57□□□□□ -1.36
RNF4-210ENST00000508235 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
RNF4-210ENST00000508235 M0QZ58 72 aa6.55□□□□□ -1.36
RNF4-210ENST00000508235 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
RNF4-210ENST00000508235 A6NN06 94 aa6.51□□□□□ -1.37
RNF4-210ENST00000508235 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
RNF4-210ENST00000508235 CCDC179H3BU77 68 aa6.48□□□□□ -1.37
RNF4-210ENST00000508235 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
RNF4-210ENST00000508235 KRTAP10-5P60370 271 aa6.45□□□□□ -1.38
RNF4-210ENST00000508235 SEC61GP60059 68 aa6.44□□□□□ -1.38
RNF4-210ENST00000508235 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
RNF4-210ENST00000508235 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
RNF4-210ENST00000508235 SERP1Q9Y6X1 66 aa6.41□□□□□ -1.38
RNF4-210ENST00000508235 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
RNF4-210ENST00000508235 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
RNF4-210ENST00000508235 TMEM258P61165 79 aa6.33□□□□□ -1.4
RNF4-210ENST00000508235 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
RNF4-210ENST00000508235 MT1XP80297 61 aa6.28□□□□□ -1.4
RNF4-210ENST00000508235 A0A1B0GU69 56 aa6.27□□□□□ -1.41
RNF4-210ENST00000508235 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
RNF4-210ENST00000508235 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
RNF4-210ENST00000508235 A0A1B0GU33 70 aa6.25□□□□□ -1.41
RNF4-210ENST00000508235 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
RNF4-210ENST00000508235 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.42
RNF4-210ENST00000508235 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
RNF4-210ENST00000508235 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
RNF4-210ENST00000508235 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
RNF4-210ENST00000508235 A0A0D9SG42 100 aa6.13□□□□□ -1.43
RNF4-210ENST00000508235 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
RNF4-210ENST00000508235 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
RNF4-210ENST00000508235 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
RNF4-210ENST00000508235 SMIM26A0A096LP01 95 aa6.1□□□□□ -1.43
RNF4-210ENST00000508235 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
RNF4-210ENST00000508235 KRTAP5-9P26371 169 aa6.02□□□□□ -1.45
RNF4-210ENST00000508235 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
RNF4-210ENST00000508235 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
RNF4-210ENST00000508235 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
RNF4-210ENST00000508235 KRTAP8-1Q8IUC2 63 aa5.98□□□□□ -1.45
RNF4-210ENST00000508235 V9GYY9 64 aa5.98□□□□□ -1.45
RNF4-210ENST00000508235 A8MU10 97 aa5.97□□□□□ -1.45
RNF4-210ENST00000508235 UQCR11O14957 56 aa5.96□□□□□ -1.46
RNF4-210ENST00000508235 PCP4P48539 62 aa5.96□□□□□ -1.46
RNF4-210ENST00000508235 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
RNF4-210ENST00000508235 Q1T7F1 81 aa5.9□□□□□ -1.46
RNF4-210ENST00000508235 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
RNF4-210ENST00000508235 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
RNF4-210ENST00000508235 PSPHP1O15172 72 aa5.83□□□□□ -1.48
RNF4-210ENST00000508235 RPS28P62857 69 aaKnown RBP5.83□□□□□ -1.48
RNF4-210ENST00000508235 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
RNF4-210ENST00000508235 KMT2DO14686 5537 aa5.81□□□□□ -1.48
RNF4-210ENST00000508235 NEBP20929 6669 aa5.79□□□□□ -1.48
RNF4-210ENST00000508235 SPRR2EP22531 72 aa5.77□□□□□ -1.49
RNF4-210ENST00000508235 SPRR2BP35325 72 aa5.77□□□□□ -1.49
RNF4-210ENST00000508235 SPRR2AP35326 72 aa5.77□□□□□ -1.49
RNF4-210ENST00000508235 K7ERS5 55 aa5.74□□□□□ -1.49
RNF4-210ENST00000508235 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
RNF4-210ENST00000508235 TNP1P09430 55 aa5.72□□□□□ -1.49
RNF4-210ENST00000508235 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
RNF4-210ENST00000508235 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
RNF4-210ENST00000508235 A6NED7 52 aa5.68□□□□□ -1.5
RNF4-210ENST00000508235 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
RNF4-210ENST00000508235 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
RNF4-210ENST00000508235 MDN1Q9NU22 5596 aa5.58□□□□□ -1.52
RNF4-210ENST00000508235 SPRR2DP22532 72 aa5.58□□□□□ -1.52
RNF4-210ENST00000508235 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
RNF4-210ENST00000508235 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
RNF4-210ENST00000508235 MT1EP04732 61 aa5.55□□□□□ -1.52
RNF4-210ENST00000508235 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
RNF4-210ENST00000508235 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
RNF4-210ENST00000508235 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 779.1 ms