RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 HERC1Q15751 4861 aa8.35□□□□□ -1.07
DDX41-207ENST00000507900 HMCN2Q8NDA2 5059 aa8.33□□□□□ -1.08
DDX41-207ENST00000507900 H1FX-AS1Q4G0G2 97 aa8.32□□□□□ -1.08
DDX41-207ENST00000507900 KRTAP4-1Q9BYQ7 146 aa8.32□□□□□ -1.08
DDX41-207ENST00000507900 S4R3F8 94 aa8.28□□□□□ -1.08
DDX41-207ENST00000507900 LCA10Q71F78 164 aa8.27□□□□□ -1.09
DDX41-207ENST00000507900 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
DDX41-207ENST00000507900 A0A1B0GU69 56 aa8.26□□□□□ -1.09
DDX41-207ENST00000507900 SEC61GP60059 68 aa8.17□□□□□ -1.1
DDX41-207ENST00000507900 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
DDX41-207ENST00000507900 UBR4Q5T4S7 5183 aa8.17□□□□□ -1.1
DDX41-207ENST00000507900 A6NED7 52 aa8.12□□□□□ -1.11
DDX41-207ENST00000507900 BRK1Q8WUW1 75 aa8.12□□□□□ -1.11
DDX41-207ENST00000507900 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
DDX41-207ENST00000507900 UQCR11O14957 56 aa8.04□□□□□ -1.12
DDX41-207ENST00000507900 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
DDX41-207ENST00000507900 PRO0628Q9UI54 55 aa8.03□□□□□ -1.12
DDX41-207ENST00000507900 KRTAP10-6P60371 365 aaPredicted RBP8.01□□□□□ -1.13
DDX41-207ENST00000507900 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
DDX41-207ENST00000507900 SPATA8Q6RVD6 105 aa7.98□□□□□ -1.13
DDX41-207ENST00000507900 A0A1B0GU33 70 aa7.97□□□□□ -1.13
DDX41-207ENST00000507900 A8MU10 97 aa7.97□□□□□ -1.13
DDX41-207ENST00000507900 H0YAA0 97 aa7.97□□□□□ -1.13
DDX41-207ENST00000507900 MUC2Q02817 5179 aa7.97□□□□□ -1.13
DDX41-207ENST00000507900 MIR22HGQ0VDD5 57 aa7.95□□□□□ -1.14
DDX41-207ENST00000507900 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
DDX41-207ENST00000507900 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
DDX41-207ENST00000507900 P0C880 135 aa7.9□□□□□ -1.14
DDX41-207ENST00000507900 FLGP20930 4061 aaPredicted RBP7.89□□□□□ -1.15
DDX41-207ENST00000507900 RNF213Q63HN8 5207 aa7.84□□□□□ -1.15
DDX41-207ENST00000507900 KRTAP13-4Q3LI77 160 aa7.79□□□□□ -1.16
DDX41-207ENST00000507900 M0QZ58 72 aa7.74□□□□□ -1.17
DDX41-207ENST00000507900 MT1HP80294 61 aa7.73□□□□□ -1.17
DDX41-207ENST00000507900 PMAIP1Q13794 54 aa7.67□□□□□ -1.18
DDX41-207ENST00000507900 FAT4Q6V0I7 4981 aa7.67□□□□□ -1.18
DDX41-207ENST00000507900 A6NN06 94 aa7.67□□□□□ -1.18
DDX41-207ENST00000507900 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
DDX41-207ENST00000507900 SVIPQ8NHG7 77 aa7.63□□□□□ -1.19
DDX41-207ENST00000507900 R4GN34 69 aa7.62□□□□□ -1.19
DDX41-207ENST00000507900 A0A0D9SG42 100 aa7.6□□□□□ -1.19
DDX41-207ENST00000507900 M0R2T5 61 aa7.6□□□□□ -1.19
DDX41-207ENST00000507900 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
DDX41-207ENST00000507900 K7ERS5 55 aa7.56□□□□□ -1.2
DDX41-207ENST00000507900 KRTAP12-1P59990 96 aa7.5□□□□□ -1.21
DDX41-207ENST00000507900 KRTAP12-2P59991 146 aa7.48□□□□□ -1.21
DDX41-207ENST00000507900 KRTAP9-8Q9BYQ0 159 aa7.47□□□□□ -1.21
DDX41-207ENST00000507900 MT2AP02795 61 aa7.46□□□□□ -1.22
DDX41-207ENST00000507900 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
DDX41-207ENST00000507900 KTN1-AS1Q86SY8 53 aa7.42□□□□□ -1.22
DDX41-207ENST00000507900 SPINT4Q6UDR6 99 aa7.42□□□□□ -1.22
DDX41-207ENST00000507900 MT1FP04733 61 aa7.41□□□□□ -1.22
DDX41-207ENST00000507900 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
DDX41-207ENST00000507900 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
DDX41-207ENST00000507900 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
DDX41-207ENST00000507900 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
DDX41-207ENST00000507900 ROMO1P60602 79 aa7.29□□□□□ -1.24
DDX41-207ENST00000507900 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
DDX41-207ENST00000507900 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
DDX41-207ENST00000507900 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
DDX41-207ENST00000507900 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
DDX41-207ENST00000507900 PRAC1Q96KF2 57 aa7.17□□□□□ -1.26
DDX41-207ENST00000507900 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
DDX41-207ENST00000507900 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
DDX41-207ENST00000507900 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.27
DDX41-207ENST00000507900 MT1BP07438 61 aa7.06□□□□□ -1.28
DDX41-207ENST00000507900 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
DDX41-207ENST00000507900 LCE2BO14633 110 aa6.96□□□□□ -1.29
DDX41-207ENST00000507900 MT1XP80297 61 aa6.86□□□□□ -1.31
DDX41-207ENST00000507900 FSIP2Q5CZC0 6907 aa6.85□□□□□ -1.31
DDX41-207ENST00000507900 KRTAP10-5P60370 271 aa6.85□□□□□ -1.31
DDX41-207ENST00000507900 TNP1P09430 55 aa6.84□□□□□ -1.31
DDX41-207ENST00000507900 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
DDX41-207ENST00000507900 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
DDX41-207ENST00000507900 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
DDX41-207ENST00000507900 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
DDX41-207ENST00000507900 USH2AO75445 5202 aa6.67□□□□□ -1.34
DDX41-207ENST00000507900 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.35
DDX41-207ENST00000507900 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
DDX41-207ENST00000507900 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
DDX41-207ENST00000507900 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
DDX41-207ENST00000507900 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
DDX41-207ENST00000507900 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
DDX41-207ENST00000507900 KRTAP8-1Q8IUC2 63 aa6.44□□□□□ -1.38
DDX41-207ENST00000507900 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
DDX41-207ENST00000507900 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.32□□□□□ -1.4
DDX41-207ENST00000507900 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
DDX41-207ENST00000507900 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
DDX41-207ENST00000507900 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
DDX41-207ENST00000507900 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
DDX41-207ENST00000507900 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
DDX41-207ENST00000507900 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
DDX41-207ENST00000507900 KMT2DO14686 5537 aa6.14□□□□□ -1.43
DDX41-207ENST00000507900 KRTAP19-7Q3SYF9 63 aa6.12□□□□□ -1.43
DDX41-207ENST00000507900 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
DDX41-207ENST00000507900 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
DDX41-207ENST00000507900 MT1EP04732 61 aa6.01□□□□□ -1.45
DDX41-207ENST00000507900 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
DDX41-207ENST00000507900 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
DDX41-207ENST00000507900 MT1LQ93083 61 aa5.9□□□□□ -1.46
DDX41-207ENST00000507900 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms