RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 HRES1P13985 223 aa5.32□□□□□ -1.56
DDX41-203ENST00000504781 RPS28P62857 69 aaKnown RBP5.3□□□□□ -1.56
DDX41-203ENST00000504781 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
DDX41-203ENST00000504781 ACYP2P14621 99 aa5.28□□□□□ -1.56
DDX41-203ENST00000504781 A8MUN3 132 aa5.26□□□□□ -1.57
DDX41-203ENST00000504781 SERP1Q9Y6X1 66 aa5.25□□□□□ -1.57
DDX41-203ENST00000504781 C4orf26Q17RF5 130 aa5.24□□□□□ -1.57
DDX41-203ENST00000504781 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
DDX41-203ENST00000504781 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
DDX41-203ENST00000504781 COX6B2Q6YFQ2 88 aa5.23□□□□□ -1.57
DDX41-203ENST00000504781 RBM12B-AS1Q9P1G2 102 aa5.19□□□□□ -1.58
DDX41-203ENST00000504781 MPLKIPQ8TAP9 179 aa5.18□□□□□ -1.58
DDX41-203ENST00000504781 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
DDX41-203ENST00000504781 MUC17Q685J3 4493 aa5.18□□□□□ -1.58
DDX41-203ENST00000504781 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
DDX41-203ENST00000504781 COA5Q86WW8 74 aa5.16□□□□□ -1.58
DDX41-203ENST00000504781 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
DDX41-203ENST00000504781 H1FX-AS1Q4G0G2 97 aa5.13□□□□□ -1.59
DDX41-203ENST00000504781 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
DDX41-203ENST00000504781 CHKB-CPT1BH3BT56 60 aa5.12□□□□□ -1.59
DDX41-203ENST00000504781 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
DDX41-203ENST00000504781 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
DDX41-203ENST00000504781 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
DDX41-203ENST00000504781 V9GYY9 64 aa5.07□□□□□ -1.6
DDX41-203ENST00000504781 Q1T7F1 81 aa5.04□□□□□ -1.6
DDX41-203ENST00000504781 S4R3F8 94 aa5.04□□□□□ -1.6
DDX41-203ENST00000504781 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
DDX41-203ENST00000504781 LCA10Q71F78 164 aa5.01□□□□□ -1.61
DDX41-203ENST00000504781 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
DDX41-203ENST00000504781 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
DDX41-203ENST00000504781 SEC61GP60059 68 aa4.95□□□□□ -1.62
DDX41-203ENST00000504781 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
DDX41-203ENST00000504781 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
DDX41-203ENST00000504781 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
DDX41-203ENST00000504781 A0A1B0GU69 56 aa4.92□□□□□ -1.62
DDX41-203ENST00000504781 MT1HP80294 61 aa4.91□□□□□ -1.62
DDX41-203ENST00000504781 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
DDX41-203ENST00000504781 M0R2T5 61 aa4.89□□□□□ -1.63
DDX41-203ENST00000504781 H0YAA0 97 aa4.88□□□□□ -1.63
DDX41-203ENST00000504781 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
DDX41-203ENST00000504781 PSPHP1O15172 72 aa4.87□□□□□ -1.63
DDX41-203ENST00000504781 Q5VV11 94 aa4.85□□□□□ -1.63
DDX41-203ENST00000504781 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.63
DDX41-203ENST00000504781 A0A1B0GU33 70 aa4.8□□□□□ -1.64
DDX41-203ENST00000504781 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
DDX41-203ENST00000504781 UQCR11O14957 56 aa4.79□□□□□ -1.64
DDX41-203ENST00000504781 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
DDX41-203ENST00000504781 A6NED7 52 aa4.75□□□□□ -1.65
DDX41-203ENST00000504781 P0C880 135 aa4.75□□□□□ -1.65
DDX41-203ENST00000504781 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
DDX41-203ENST00000504781 M0QZ58 72 aa4.73□□□□□ -1.65
DDX41-203ENST00000504781 SPATA8Q6RVD6 105 aa4.73□□□□□ -1.65
DDX41-203ENST00000504781 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
DDX41-203ENST00000504781 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
DDX41-203ENST00000504781 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
DDX41-203ENST00000504781 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
DDX41-203ENST00000504781 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
DDX41-203ENST00000504781 R4GN34 69 aa4.66□□□□□ -1.66
DDX41-203ENST00000504781 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
DDX41-203ENST00000504781 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
DDX41-203ENST00000504781 KRTAP13-4Q3LI77 160 aa4.61□□□□□ -1.67
DDX41-203ENST00000504781 MT2AP02795 61 aa4.6□□□□□ -1.67
DDX41-203ENST00000504781 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
DDX41-203ENST00000504781 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
DDX41-203ENST00000504781 A8MU10 97 aa4.56□□□□□ -1.68
DDX41-203ENST00000504781 MT1FP04733 61 aa4.56□□□□□ -1.68
DDX41-203ENST00000504781 SPRR2GQ9BYE4 73 aa4.56□□□□□ -1.68
DDX41-203ENST00000504781 K7ERS5 55 aa4.55□□□□□ -1.68
DDX41-203ENST00000504781 USH2AO75445 5202 aa4.55□□□□□ -1.68
DDX41-203ENST00000504781 A6NN06 94 aa4.54□□□□□ -1.68
DDX41-203ENST00000504781 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
DDX41-203ENST00000504781 A0A0D9SG42 100 aa4.53□□□□□ -1.68
DDX41-203ENST00000504781 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
DDX41-203ENST00000504781 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
DDX41-203ENST00000504781 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
DDX41-203ENST00000504781 KRTAP12-1P59990 96 aa4.49□□□□□ -1.69
DDX41-203ENST00000504781 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
DDX41-203ENST00000504781 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
DDX41-203ENST00000504781 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
DDX41-203ENST00000504781 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
DDX41-203ENST00000504781 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
DDX41-203ENST00000504781 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
DDX41-203ENST00000504781 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
DDX41-203ENST00000504781 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
DDX41-203ENST00000504781 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.71
DDX41-203ENST00000504781 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
DDX41-203ENST00000504781 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
DDX41-203ENST00000504781 MT1BP07438 61 aa4.33□□□□□ -1.72
DDX41-203ENST00000504781 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
DDX41-203ENST00000504781 ROMO1P60602 79 aa4.31□□□□□ -1.72
DDX41-203ENST00000504781 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
DDX41-203ENST00000504781 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
DDX41-203ENST00000504781 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
DDX41-203ENST00000504781 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
DDX41-203ENST00000504781 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
DDX41-203ENST00000504781 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
DDX41-203ENST00000504781 MT1XP80297 61 aa4.18□□□□□ -1.74
DDX41-203ENST00000504781 H3BS24 57 aa4.17□□□□□ -1.74
DDX41-203ENST00000504781 TNP1P09430 55 aa4.17□□□□□ -1.74
DDX41-203ENST00000504781 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms