RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
SMTN-221ENST00000504335 DNAH7Q8WXX0 4024 aa6.61□□□□□ -1.35
SMTN-221ENST00000504335 KRTAP10-8P60410 259 aa6.61□□□□□ -1.35
SMTN-221ENST00000504335 DNAH6Q9C0G6 4158 aa6.58□□□□□ -1.36
SMTN-221ENST00000504335 DNAH11Q96DT5 4516 aa6.51□□□□□ -1.37
SMTN-221ENST00000504335 DNAH2Q9P225 4427 aa6.49□□□□□ -1.37
SMTN-221ENST00000504335 KMT2CQ8NEZ4 4911 aaKnown RBP6.49□□□□□ -1.37
SMTN-221ENST00000504335 INE1O15225 51 aa6.47□□□□□ -1.37
SMTN-221ENST00000504335 PLECQ15149 4684 aaKnown RBP6.47□□□□□ -1.37
SMTN-221ENST00000504335 STARD9Q9P2P6 4700 aa6.45□□□□□ -1.38
SMTN-221ENST00000504335 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
SMTN-221ENST00000504335 R4GN34 69 aa6.43□□□□□ -1.38
SMTN-221ENST00000504335 RYR3Q15413 4870 aa6.41□□□□□ -1.38
SMTN-221ENST00000504335 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
SMTN-221ENST00000504335 KRTAP10-1P60331 282 aa6.36□□□□□ -1.39
SMTN-221ENST00000504335 LRP1BQ9NZR2 4599 aa6.35□□□□□ -1.39
SMTN-221ENST00000504335 HYDINQ4G0P3 5121 aa6.32□□□□□ -1.4
SMTN-221ENST00000504335 MYCBP2O75592 4640 aa6.3□□□□□ -1.4
SMTN-221ENST00000504335 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
SMTN-221ENST00000504335 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
SMTN-221ENST00000504335 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
SMTN-221ENST00000504335 RYR2Q92736 4967 aa6.21□□□□□ -1.42
SMTN-221ENST00000504335 EPPK1P58107 5090 aaKnown RBP6.21□□□□□ -1.42
SMTN-221ENST00000504335 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
SMTN-221ENST00000504335 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
SMTN-221ENST00000504335 A0A1B0GVY2 172 aa6.13□□□□□ -1.43
SMTN-221ENST00000504335 PKHD1L1Q86WI1 4243 aa6.12□□□□□ -1.43
SMTN-221ENST00000504335 FAT2Q9NYQ8 4349 aa6.09□□□□□ -1.43
SMTN-221ENST00000504335 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
SMTN-221ENST00000504335 PKD1P98161 4303 aa6.06□□□□□ -1.44
SMTN-221ENST00000504335 PKHD1P08F94 4074 aa6.05□□□□□ -1.44
SMTN-221ENST00000504335 Q5VSD8 79 aa6.04□□□□□ -1.44
SMTN-221ENST00000504335 BIRC6Q9NR09 4857 aa6.02□□□□□ -1.45
SMTN-221ENST00000504335 TNP1P09430 55 aa6.01□□□□□ -1.45
SMTN-221ENST00000504335 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
SMTN-221ENST00000504335 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
SMTN-221ENST00000504335 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
SMTN-221ENST00000504335 DYNC1H1Q14204 4646 aaKnown RBP5.89□□□□□ -1.47
SMTN-221ENST00000504335 KRTAP10-4P60372 401 aaPredicted RBP5.88□□□□□ -1.47
SMTN-221ENST00000504335 TNXBP22105 4242 aa5.88□□□□□ -1.47
SMTN-221ENST00000504335 PCLOQ9Y6V0 5065 aa5.87□□□□□ -1.47
SMTN-221ENST00000504335 RYR1P21817 5038 aa5.87□□□□□ -1.47
SMTN-221ENST00000504335 HSPG2P98160 4391 aa5.87□□□□□ -1.47
SMTN-221ENST00000504335 FAT3Q8TDW7 4589 aa5.85□□□□□ -1.47
SMTN-221ENST00000504335 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
SMTN-221ENST00000504335 FAT1Q14517 4588 aa5.8□□□□□ -1.48
SMTN-221ENST00000504335 HERC2O95714 4834 aa5.8□□□□□ -1.48
SMTN-221ENST00000504335 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
SMTN-221ENST00000504335 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
SMTN-221ENST00000504335 HERC1Q15751 4861 aa5.6□□□□□ -1.51
SMTN-221ENST00000504335 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
SMTN-221ENST00000504335 LPAP08519 4548 aa5.51□□□□□ -1.53
SMTN-221ENST00000504335 KRTAP10-10P60014 251 aa5.5□□□□□ -1.53
SMTN-221ENST00000504335 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
SMTN-221ENST00000504335 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
SMTN-221ENST00000504335 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
SMTN-221ENST00000504335 LRP2P98164 4655 aa5.36□□□□□ -1.55
SMTN-221ENST00000504335 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
SMTN-221ENST00000504335 UBR4Q5T4S7 5183 aa5.33□□□□□ -1.56
SMTN-221ENST00000504335 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
SMTN-221ENST00000504335 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
SMTN-221ENST00000504335 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
SMTN-221ENST00000504335 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
SMTN-221ENST00000504335 MUC17Q685J3 4493 aa5.18□□□□□ -1.58
SMTN-221ENST00000504335 MUC2Q02817 5179 aa5.13□□□□□ -1.59
SMTN-221ENST00000504335 KRTAP4-1Q9BYQ7 146 aa5.12□□□□□ -1.59
SMTN-221ENST00000504335 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
SMTN-221ENST00000504335 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
SMTN-221ENST00000504335 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
SMTN-221ENST00000504335 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
SMTN-221ENST00000504335 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
SMTN-221ENST00000504335 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
SMTN-221ENST00000504335 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
SMTN-221ENST00000504335 FAT4Q6V0I7 4981 aa4.89□□□□□ -1.63
SMTN-221ENST00000504335 M0R2T5 61 aa4.84□□□□□ -1.63
SMTN-221ENST00000504335 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
SMTN-221ENST00000504335 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
SMTN-221ENST00000504335 MT1XP80297 61 aa4.77□□□□□ -1.65
SMTN-221ENST00000504335 LCE2CQ5TA81 110 aa4.77□□□□□ -1.65
SMTN-221ENST00000504335 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
SMTN-221ENST00000504335 MT1HP80294 61 aa4.7□□□□□ -1.66
SMTN-221ENST00000504335 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
SMTN-221ENST00000504335 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
SMTN-221ENST00000504335 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
SMTN-221ENST00000504335 MT1BP07438 61 aa4.59□□□□□ -1.67
SMTN-221ENST00000504335 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
SMTN-221ENST00000504335 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
SMTN-221ENST00000504335 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
SMTN-221ENST00000504335 MT1FP04733 61 aa4.53□□□□□ -1.68
SMTN-221ENST00000504335 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
SMTN-221ENST00000504335 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
SMTN-221ENST00000504335 MT2AP02795 61 aa4.5□□□□□ -1.69
SMTN-221ENST00000504335 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
SMTN-221ENST00000504335 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
SMTN-221ENST00000504335 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
SMTN-221ENST00000504335 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
SMTN-221ENST00000504335 USH2AO75445 5202 aa4.35□□□□□ -1.71
SMTN-221ENST00000504335 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
SMTN-221ENST00000504335 CRCT1Q9UGL9 99 aa4.29□□□□□ -1.72
SMTN-221ENST00000504335 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms