RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 TRAV22A0A0B4J277 110 aa8.72□□□□□ -1.01
UBE2D3-215ENST00000503418 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
UBE2D3-215ENST00000503418 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
UBE2D3-215ENST00000503418 KRTAP19-8Q3LI54 63 aa8.69□□□□□ -1.02
UBE2D3-215ENST00000503418 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
UBE2D3-215ENST00000503418 A0A087WVE0 104 aa8.67□□□□□ -1.02
UBE2D3-215ENST00000503418 H0Y9P7 68 aa8.58□□□□□ -1.04
UBE2D3-215ENST00000503418 UQCRQO14949 82 aa8.58□□□□□ -1.04
UBE2D3-215ENST00000503418 MT-ATP8P03928 68 aa8.58□□□□□ -1.04
UBE2D3-215ENST00000503418 KRTAP10-5P60370 271 aa8.57□□□□□ -1.04
UBE2D3-215ENST00000503418 IMUPQ9GZP8 106 aa8.57□□□□□ -1.04
UBE2D3-215ENST00000503418 ATOX1O00244 68 aa8.55□□□□□ -1.04
UBE2D3-215ENST00000503418 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
UBE2D3-215ENST00000503418 NDUFC1O43677 76 aa8.52□□□□□ -1.05
UBE2D3-215ENST00000503418 SCGB1A1P11684 91 aa8.49□□□□□ -1.05
UBE2D3-215ENST00000503418 OCR1Q9BZK8 76 aa8.46□□□□□ -1.06
UBE2D3-215ENST00000503418 MUC12Q9UKN1 5478 aa8.46□□□□□ -1.06
UBE2D3-215ENST00000503418 H0YAA0 97 aa8.44□□□□□ -1.06
UBE2D3-215ENST00000503418 A8MUN3 132 aa8.43□□□□□ -1.06
UBE2D3-215ENST00000503418 LINC00208Q96KT6 92 aa8.42□□□□□ -1.06
UBE2D3-215ENST00000503418 NEBP20929 6669 aa8.41□□□□□ -1.06
UBE2D3-215ENST00000503418 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.06
UBE2D3-215ENST00000503418 MP68P56378 58 aa8.38□□□□□ -1.07
UBE2D3-215ENST00000503418 SMIM20Q8N5G0 67 aa8.35□□□□□ -1.07
UBE2D3-215ENST00000503418 TRAV7A0A075B6U4 112 aa8.31□□□□□ -1.08
UBE2D3-215ENST00000503418 H3BPC8 53 aa8.3□□□□□ -1.08
UBE2D3-215ENST00000503418 KRTAP5-9P26371 169 aa8.3□□□□□ -1.08
UBE2D3-215ENST00000503418 KMT2DO14686 5537 aa8.24□□□□□ -1.09
UBE2D3-215ENST00000503418 MDN1Q9NU22 5596 aa8.23□□□□□ -1.09
UBE2D3-215ENST00000503418 PRO2289Q9P1D8 64 aa8.22□□□□□ -1.09
UBE2D3-215ENST00000503418 KRTAP20-1Q3LI63 56 aa8.2□□□□□ -1.1
UBE2D3-215ENST00000503418 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
UBE2D3-215ENST00000503418 R4GN34 69 aa8.2□□□□□ -1.1
UBE2D3-215ENST00000503418 P0C880 135 aa8.18□□□□□ -1.1
UBE2D3-215ENST00000503418 SERP2Q8N6R1 65 aa8.18□□□□□ -1.1
UBE2D3-215ENST00000503418 MT1XP80297 61 aa8.17□□□□□ -1.1
UBE2D3-215ENST00000503418 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
UBE2D3-215ENST00000503418 DMAC1Q96GE9 116 aa8.15□□□□□ -1.1
UBE2D3-215ENST00000503418 M0QZ58 72 aa8.13□□□□□ -1.11
UBE2D3-215ENST00000503418 SNURFQ9Y675 71 aa8.1□□□□□ -1.11
UBE2D3-215ENST00000503418 SPRR2FQ96RM1 72 aa8.09□□□□□ -1.11
UBE2D3-215ENST00000503418 COX7CP15954 63 aa8.05□□□□□ -1.12
UBE2D3-215ENST00000503418 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
UBE2D3-215ENST00000503418 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
UBE2D3-215ENST00000503418 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
UBE2D3-215ENST00000503418 ANAPC13Q9BS18 74 aa8.01□□□□□ -1.13
UBE2D3-215ENST00000503418 SPRR2EP22531 72 aa8□□□□□ -1.13
UBE2D3-215ENST00000503418 SPRR2BP35325 72 aa8□□□□□ -1.13
UBE2D3-215ENST00000503418 SPRR2AP35326 72 aa8□□□□□ -1.13
UBE2D3-215ENST00000503418 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
UBE2D3-215ENST00000503418 ACYP2P14621 99 aa7.94□□□□□ -1.14
UBE2D3-215ENST00000503418 KRTAP2-3P0C7H8 128 aa7.93□□□□□ -1.14
UBE2D3-215ENST00000503418 KRTAP2-4Q9BYR9 128 aa7.93□□□□□ -1.14
UBE2D3-215ENST00000503418 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
UBE2D3-215ENST00000503418 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
UBE2D3-215ENST00000503418 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
UBE2D3-215ENST00000503418 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
UBE2D3-215ENST00000503418 LCE1AQ5T7P2 110 aa7.84□□□□□ -1.15
UBE2D3-215ENST00000503418 CHKB-CPT1BH3BT56 60 aa7.83□□□□□ -1.16
UBE2D3-215ENST00000503418 CYSTM1Q9H1C7 97 aa7.83□□□□□ -1.16
UBE2D3-215ENST00000503418 H7BZZ5 65 aa7.82□□□□□ -1.16
UBE2D3-215ENST00000503418 CCDC179H3BU77 68 aa7.81□□□□□ -1.16
UBE2D3-215ENST00000503418 KRTAP10-7P60409 375 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-215ENST00000503418 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
UBE2D3-215ENST00000503418 SPRR2DP22532 72 aa7.73□□□□□ -1.17
UBE2D3-215ENST00000503418 COA5Q86WW8 74 aa7.68□□□□□ -1.18
UBE2D3-215ENST00000503418 KRTAP2-2Q9BYT5 123 aa7.68□□□□□ -1.18
UBE2D3-215ENST00000503418 KRTAP2-1Q9BYU5 128 aa7.68□□□□□ -1.18
UBE2D3-215ENST00000503418 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
UBE2D3-215ENST00000503418 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
UBE2D3-215ENST00000503418 TMEM258P61165 79 aa7.56□□□□□ -1.2
UBE2D3-215ENST00000503418 CAMK2N1Q7Z7J9 78 aa7.53□□□□□ -1.2
UBE2D3-215ENST00000503418 LCE3BQ5TA77 95 aa7.52□□□□□ -1.21
UBE2D3-215ENST00000503418 PCP4P48539 62 aa7.42□□□□□ -1.22
UBE2D3-215ENST00000503418 SEC61GP60059 68 aa7.42□□□□□ -1.22
UBE2D3-215ENST00000503418 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
UBE2D3-215ENST00000503418 A0A0D9SG42 100 aa7.38□□□□□ -1.23
UBE2D3-215ENST00000503418 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
UBE2D3-215ENST00000503418 A0A1B0GU69 56 aa7.3□□□□□ -1.24
UBE2D3-215ENST00000503418 KRTAP19-7Q3SYF9 63 aa7.3□□□□□ -1.24
UBE2D3-215ENST00000503418 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
UBE2D3-215ENST00000503418 A0A1B0GU33 70 aa7.26□□□□□ -1.25
UBE2D3-215ENST00000503418 MT1EP04732 61 aa7.25□□□□□ -1.25
UBE2D3-215ENST00000503418 LCE5AQ5TCM9 118 aa7.24□□□□□ -1.25
UBE2D3-215ENST00000503418 KRTAP19-3Q7Z4W3 81 aa7.22□□□□□ -1.25
UBE2D3-215ENST00000503418 PRR15LQ9BU68 103 aa7.21□□□□□ -1.26
UBE2D3-215ENST00000503418 LINC01558Q9Y6Z2 57 aa7.21□□□□□ -1.26
UBE2D3-215ENST00000503418 KRTAP12-1P59990 96 aa7.18□□□□□ -1.26
UBE2D3-215ENST00000503418 DSTQ03001 7570 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-215ENST00000503418 KRTAP19-5Q3LI72 72 aa7.11□□□□□ -1.27
UBE2D3-215ENST00000503418 V9GYY9 64 aa7.08□□□□□ -1.28
UBE2D3-215ENST00000503418 SMIM26A0A096LP01 95 aa7.06□□□□□ -1.28
UBE2D3-215ENST00000503418 RPS28P62857 69 aaKnown RBP7.05□□□□□ -1.28
UBE2D3-215ENST00000503418 Q1T7F1 81 aa7.03□□□□□ -1.28
UBE2D3-215ENST00000503418 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
UBE2D3-215ENST00000503418 A8MU10 97 aa7.02□□□□□ -1.29
UBE2D3-215ENST00000503418 MT1GP13640 62 aa7.02□□□□□ -1.29
UBE2D3-215ENST00000503418 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
UBE2D3-215ENST00000503418 UQCR11O14957 56 aa6.97□□□□□ -1.29
UBE2D3-215ENST00000503418 PSPHP1O15172 72 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms