RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 RPL37P61927 97 aaKnown RBP12.56□□□□□ -0.4
DDX41-202ENST00000503078 CRIPTQ9P021 101 aa12.55□□□□□ -0.4
DDX41-202ENST00000503078 ROMO1P60602 79 aa12.54□□□□□ -0.4
DDX41-202ENST00000503078 TNXBP22105 4242 aa12.52□□□□□ -0.4
DDX41-202ENST00000503078 KRTAP13-4Q3LI77 160 aa12.52□□□□□ -0.41
DDX41-202ENST00000503078 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
DDX41-202ENST00000503078 KRTAP3-2Q9BYR7 98 aa12.51□□□□□ -0.41
DDX41-202ENST00000503078 RYR3Q15413 4870 aa12.5□□□□□ -0.41
DDX41-202ENST00000503078 Q5VSD8 79 aa12.5□□□□□ -0.41
DDX41-202ENST00000503078 HSPG2P98160 4391 aa12.48□□□□□ -0.41
DDX41-202ENST00000503078 S4R3F8 94 aa12.48□□□□□ -0.41
DDX41-202ENST00000503078 XP32Q5T750 250 aa12.45□□□□□ -0.42
DDX41-202ENST00000503078 DMBT1Q9UGM3 2413 aaPredicted RBP12.44□□□□□ -0.42
DDX41-202ENST00000503078 LRP1Q07954 4544 aaKnown RBP12.44□□□□□ -0.42
DDX41-202ENST00000503078 A0A0D9SG42 100 aa12.44□□□□□ -0.42
DDX41-202ENST00000503078 H3BS24 57 aa12.4□□□□□ -0.43
DDX41-202ENST00000503078 KRTAP17-1Q9BYP8 105 aa12.38□□□□□ -0.43
DDX41-202ENST00000503078 RYR1P21817 5038 aa12.36□□□□□ -0.43
DDX41-202ENST00000503078 P0C880 135 aa12.32□□□□□ -0.44
DDX41-202ENST00000503078 TPRXLQ17RH7 258 aa12.22□□□□□ -0.45
DDX41-202ENST00000503078 MYCBP2O75592 4640 aa12.22□□□□□ -0.45
DDX41-202ENST00000503078 KIAA1109Q2LD37 5005 aa12.22□□□□□ -0.45
DDX41-202ENST00000503078 MT1HL1P0DM35 61 aa12.15□□□□□ -0.46
DDX41-202ENST00000503078 KRTAP12-2P59991 146 aa12.14□□□□□ -0.47
DDX41-202ENST00000503078 C10orf95Q9H7T3 257 aa12.08□□□□□ -0.47
DDX41-202ENST00000503078 EPPK1P58107 5090 aaKnown RBP12.05□□□□□ -0.48
DDX41-202ENST00000503078 KRTAP12-1P59990 96 aa12.04□□□□□ -0.48
DDX41-202ENST00000503078 SPINT4Q6UDR6 99 aa12.02□□□□□ -0.49
DDX41-202ENST00000503078 M0QZ58 72 aa11.96□□□□□ -0.5
DDX41-202ENST00000503078 LPAP08519 4548 aa11.94□□□□□ -0.5
DDX41-202ENST00000503078 KRTAP4-5Q9BYR2 181 aa11.84□□□□□ -0.51
DDX41-202ENST00000503078 LRP2P98164 4655 aa11.82□□□□□ -0.52
DDX41-202ENST00000503078 KRTAP15-1Q3LI76 137 aa11.78□□□□□ -0.52
DDX41-202ENST00000503078 ABCA13Q86UQ4 5058 aa11.63□□□□□ -0.55
DDX41-202ENST00000503078 R4GN34 69 aa11.6□□□□□ -0.55
DDX41-202ENST00000503078 NDUFAF8A1L188 74 aa11.54□□□□□ -0.56
DDX41-202ENST00000503078 SEC61BP60468 96 aaKnown RBP11.42□□□□□ -0.58
DDX41-202ENST00000503078 J3QL48 77 aa11.41□□□□□ -0.58
DDX41-202ENST00000503078 LORP23490 312 aaPredicted RBP11.39□□□□□ -0.59
DDX41-202ENST00000503078 MUC17Q685J3 4493 aa11.37□□□□□ -0.59
DDX41-202ENST00000503078 HERC2O95714 4834 aa11.37□□□□□ -0.59
DDX41-202ENST00000503078 BIRC6Q9NR09 4857 aa11.27□□□□□ -0.61
DDX41-202ENST00000503078 KRTAP4-1Q9BYQ7 146 aa11.26□□□□□ -0.61
DDX41-202ENST00000503078 PLAC4Q8WY50 150 aa11.16□□□□□ -0.62
DDX41-202ENST00000503078 KRTAP19-2Q3LHN2 52 aa11.12□□□□□ -0.63
DDX41-202ENST00000503078 CAMK2N1Q7Z7J9 78 aa11.04□□□□□ -0.64
DDX41-202ENST00000503078 PP632Q6XCG6 107 aa11.02□□□□□ -0.65
DDX41-202ENST00000503078 PCLOQ9Y6V0 5065 aa10.92□□□□□ -0.66
DDX41-202ENST00000503078 HERC1Q15751 4861 aa10.81□□□□□ -0.68
DDX41-202ENST00000503078 FLGP20930 4061 aaPredicted RBP10.77□□□□□ -0.68
DDX41-202ENST00000503078 MUC2Q02817 5179 aa10.77□□□□□ -0.69
DDX41-202ENST00000503078 HMCN2Q8NDA2 5059 aa10.74□□□□□ -0.69
DDX41-202ENST00000503078 LUZP6Q538Z0 58 aa10.7□□□□□ -0.7
DDX41-202ENST00000503078 TNP1P09430 55 aa10.67□□□□□ -0.7
DDX41-202ENST00000503078 KRTAP23-1A1A580 65 aa10.61□□□□□ -0.71
DDX41-202ENST00000503078 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
DDX41-202ENST00000503078 SPRR5A0A1B0GTR4 108 aa10.37□□□□□ -0.75
DDX41-202ENST00000503078 SPRR2GQ9BYE4 73 aa10.35□□□□□ -0.75
DDX41-202ENST00000503078 A0A0A0MQY5 61 aa10.31□□□□□ -0.76
DDX41-202ENST00000503078 KRTAP19-1Q8IUB9 90 aa10.27□□□□□ -0.77
DDX41-202ENST00000503078 UBR4Q5T4S7 5183 aa10.27□□□□□ -0.77
DDX41-202ENST00000503078 FAT4Q6V0I7 4981 aa10.25□□□□□ -0.77
DDX41-202ENST00000503078 RNF213Q63HN8 5207 aa10.24□□□□□ -0.77
DDX41-202ENST00000503078 MT1HP80294 61 aa10.17□□□□□ -0.78
DDX41-202ENST00000503078 M0R2T5 61 aa10.11□□□□□ -0.79
DDX41-202ENST00000503078 LCE3AQ5TA76 89 aa10.07□□□□□ -0.8
DDX41-202ENST00000503078 MT1FP04733 61 aa9.96□□□□□ -0.81
DDX41-202ENST00000503078 MT2AP02795 61 aa9.95□□□□□ -0.82
DDX41-202ENST00000503078 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
DDX41-202ENST00000503078 KRTAP9-8Q9BYQ0 159 aa9.9□□□□□ -0.82
DDX41-202ENST00000503078 KRTAP19-8Q3LI54 63 aa9.84□□□□□ -0.83
DDX41-202ENST00000503078 KRTAP8-1Q8IUC2 63 aa9.83□□□□□ -0.84
DDX41-202ENST00000503078 KRTAP10-5P60370 271 aa9.72□□□□□ -0.85
DDX41-202ENST00000503078 MT1BP07438 61 aa9.7□□□□□ -0.86
DDX41-202ENST00000503078 MT1XP80297 61 aa9.69□□□□□ -0.86
DDX41-202ENST00000503078 KRTAP10-12P60413 245 aa9.59□□□□□ -0.87
DDX41-202ENST00000503078 KRTAP12-3P60328 96 aa9.58□□□□□ -0.88
DDX41-202ENST00000503078 KRTAP9-3Q9BYQ3 159 aa9.51□□□□□ -0.89
DDX41-202ENST00000503078 KRTAP10-7P60409 375 aaPredicted RBP9.44□□□□□ -0.9
DDX41-202ENST00000503078 PRO2289Q9P1D8 64 aa9.35□□□□□ -0.91
DDX41-202ENST00000503078 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
DDX41-202ENST00000503078 INE1O15225 51 aa9.32□□□□□ -0.92
DDX41-202ENST00000503078 LCE2BO14633 110 aa9.17□□□□□ -0.94
DDX41-202ENST00000503078 KRTAP19-5Q3LI72 72 aa9.09□□□□□ -0.95
DDX41-202ENST00000503078 LCE3CQ5T5A8 94 aa9.04□□□□□ -0.96
DDX41-202ENST00000503078 USH2AO75445 5202 aa8.87□□□□□ -0.99
DDX41-202ENST00000503078 KMT2DO14686 5537 aa8.78□□□□□ -1
DDX41-202ENST00000503078 KRTAP4-8A0A0G2JLE6 195 aa8.78□□□□□ -1
DDX41-202ENST00000503078 KRTAP4-8Q9BYQ9 185 aa8.78□□□□□ -1
DDX41-202ENST00000503078 KRTAP9-6A8MVA2 160 aa8.72□□□□□ -1.01
DDX41-202ENST00000503078 KRTAP19-7Q3SYF9 63 aa8.64□□□□□ -1.03
DDX41-202ENST00000503078 KRTAP2-3P0C7H8 128 aa8.53□□□□□ -1.04
DDX41-202ENST00000503078 KRTAP2-4Q9BYR9 128 aa8.53□□□□□ -1.04
DDX41-202ENST00000503078 KRTAP2-1Q9BYU5 128 aa8.53□□□□□ -1.04
DDX41-202ENST00000503078 KRTAP4-7Q9BYR0 210 aa8.51□□□□□ -1.05
DDX41-202ENST00000503078 KRTAP19-4Q3LI73 84 aa8.49□□□□□ -1.05
DDX41-202ENST00000503078 SSPOA2VEC9 5147 aa8.48□□□□□ -1.05
DDX41-202ENST00000503078 MT1LQ93083 61 aa8.41□□□□□ -1.06
DDX41-202ENST00000503078 KRTAP19-6Q3LI70 58 aa8.39□□□□□ -1.07
DDX41-202ENST00000503078 MT1EP04732 61 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms