RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 SPINK1P00995 79 aa6.11□□□□□ -1.43
AC055717.1-201ENST00000502221 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
AC055717.1-201ENST00000502221 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
AC055717.1-201ENST00000502221 RPS29P62273 56 aaKnown RBP6.07□□□□□ -1.44
AC055717.1-201ENST00000502221 FLG2Q5D862 2391 aaPredicted RBP6.06□□□□□ -1.44
AC055717.1-201ENST00000502221 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
AC055717.1-201ENST00000502221 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
AC055717.1-201ENST00000502221 PKHD1L1Q86WI1 4243 aa6□□□□□ -1.45
AC055717.1-201ENST00000502221 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
AC055717.1-201ENST00000502221 TYMSOSQ8TAI1 123 aa5.98□□□□□ -1.45
AC055717.1-201ENST00000502221 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
AC055717.1-201ENST00000502221 KRTAP1-4P0C5Y4 121 aa5.98□□□□□ -1.45
AC055717.1-201ENST00000502221 J3QL48 77 aa5.95□□□□□ -1.46
AC055717.1-201ENST00000502221 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
AC055717.1-201ENST00000502221 COX6B2Q6YFQ2 88 aa5.93□□□□□ -1.46
AC055717.1-201ENST00000502221 RPL37P61927 97 aaKnown RBP5.89□□□□□ -1.47
AC055717.1-201ENST00000502221 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
AC055717.1-201ENST00000502221 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
AC055717.1-201ENST00000502221 P0C880 135 aa5.86□□□□□ -1.47
AC055717.1-201ENST00000502221 MT1HL1P0DM35 61 aa5.84□□□□□ -1.48
AC055717.1-201ENST00000502221 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
AC055717.1-201ENST00000502221 TNXBP22105 4242 aa5.81□□□□□ -1.48
AC055717.1-201ENST00000502221 UBR4Q5T4S7 5183 aa5.8□□□□□ -1.48
AC055717.1-201ENST00000502221 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
AC055717.1-201ENST00000502221 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
AC055717.1-201ENST00000502221 CRIPTQ9P021 101 aa5.77□□□□□ -1.49
AC055717.1-201ENST00000502221 C9orf92A6NGG3 77 aa5.73□□□□□ -1.49
AC055717.1-201ENST00000502221 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
AC055717.1-201ENST00000502221 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
AC055717.1-201ENST00000502221 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
AC055717.1-201ENST00000502221 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
AC055717.1-201ENST00000502221 KRTAP3-2Q9BYR7 98 aa5.72□□□□□ -1.49
AC055717.1-201ENST00000502221 LRP2P98164 4655 aa5.7□□□□□ -1.5
AC055717.1-201ENST00000502221 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
AC055717.1-201ENST00000502221 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
AC055717.1-201ENST00000502221 S4R3F8 94 aa5.64□□□□□ -1.51
AC055717.1-201ENST00000502221 A0A0D9SG42 100 aa5.64□□□□□ -1.51
AC055717.1-201ENST00000502221 LPAP08519 4548 aa5.63□□□□□ -1.51
AC055717.1-201ENST00000502221 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
AC055717.1-201ENST00000502221 RNF213Q63HN8 5207 aa5.6□□□□□ -1.51
AC055717.1-201ENST00000502221 M0QZ58 72 aa5.56□□□□□ -1.52
AC055717.1-201ENST00000502221 XP32Q5T750 250 aa5.56□□□□□ -1.52
AC055717.1-201ENST00000502221 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
AC055717.1-201ENST00000502221 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
AC055717.1-201ENST00000502221 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
AC055717.1-201ENST00000502221 MUC2Q02817 5179 aa5.38□□□□□ -1.55
AC055717.1-201ENST00000502221 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
AC055717.1-201ENST00000502221 MUC17Q685J3 4493 aa5.34□□□□□ -1.55
AC055717.1-201ENST00000502221 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
AC055717.1-201ENST00000502221 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
AC055717.1-201ENST00000502221 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
AC055717.1-201ENST00000502221 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
AC055717.1-201ENST00000502221 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
AC055717.1-201ENST00000502221 R4GN34 69 aa5.24□□□□□ -1.57
AC055717.1-201ENST00000502221 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
AC055717.1-201ENST00000502221 KRTAP4-1Q9BYQ7 146 aa5.18□□□□□ -1.58
AC055717.1-201ENST00000502221 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
AC055717.1-201ENST00000502221 SEC61BP60468 96 aaKnown RBP5.08□□□□□ -1.6
AC055717.1-201ENST00000502221 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
AC055717.1-201ENST00000502221 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
AC055717.1-201ENST00000502221 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
AC055717.1-201ENST00000502221 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
AC055717.1-201ENST00000502221 CAMK2N1Q7Z7J9 78 aa5.01□□□□□ -1.61
AC055717.1-201ENST00000502221 LCE2BO14633 110 aa4.98□□□□□ -1.61
AC055717.1-201ENST00000502221 MT1HP80294 61 aa4.97□□□□□ -1.61
AC055717.1-201ENST00000502221 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.61
AC055717.1-201ENST00000502221 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
AC055717.1-201ENST00000502221 TNP1P09430 55 aa4.93□□□□□ -1.62
AC055717.1-201ENST00000502221 LORP23490 312 aaPredicted RBP4.91□□□□□ -1.62
AC055717.1-201ENST00000502221 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.62
AC055717.1-201ENST00000502221 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.62
AC055717.1-201ENST00000502221 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
AC055717.1-201ENST00000502221 M0R2T5 61 aa4.8□□□□□ -1.64
AC055717.1-201ENST00000502221 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
AC055717.1-201ENST00000502221 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
AC055717.1-201ENST00000502221 INE1O15225 51 aa4.77□□□□□ -1.65
AC055717.1-201ENST00000502221 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
AC055717.1-201ENST00000502221 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
AC055717.1-201ENST00000502221 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
AC055717.1-201ENST00000502221 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
AC055717.1-201ENST00000502221 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
AC055717.1-201ENST00000502221 USH2AO75445 5202 aa4.62□□□□□ -1.67
AC055717.1-201ENST00000502221 SSPOA2VEC9 5147 aa4.62□□□□□ -1.67
AC055717.1-201ENST00000502221 MT2AP02795 61 aa4.61□□□□□ -1.67
AC055717.1-201ENST00000502221 MT1FP04733 61 aa4.59□□□□□ -1.67
AC055717.1-201ENST00000502221 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
AC055717.1-201ENST00000502221 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
AC055717.1-201ENST00000502221 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
AC055717.1-201ENST00000502221 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
AC055717.1-201ENST00000502221 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
AC055717.1-201ENST00000502221 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
AC055717.1-201ENST00000502221 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
AC055717.1-201ENST00000502221 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
AC055717.1-201ENST00000502221 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
AC055717.1-201ENST00000502221 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
AC055717.1-201ENST00000502221 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
AC055717.1-201ENST00000502221 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
AC055717.1-201ENST00000502221 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
AC055717.1-201ENST00000502221 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
AC055717.1-201ENST00000502221 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms