RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.82
LYSMD3-203ENST00000500869 FLG2Q5D862 2391 aaPredicted RBP3.71□□□□□ -1.82
LYSMD3-203ENST00000500869 XP32Q5T750 250 aa3.7□□□□□ -1.82
LYSMD3-203ENST00000500869 KRTAP3-2Q9BYR7 98 aa3.7□□□□□ -1.82
LYSMD3-203ENST00000500869 CSAG1Q6PB30 78 aa3.7□□□□□ -1.82
LYSMD3-203ENST00000500869 RYR3Q15413 4870 aa3.69□□□□□ -1.82
LYSMD3-203ENST00000500869 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
LYSMD3-203ENST00000500869 RYR1P21817 5038 aa3.67□□□□□ -1.82
LYSMD3-203ENST00000500869 Q5VSD8 79 aa3.65□□□□□ -1.82
LYSMD3-203ENST00000500869 MT1HL1P0DM35 61 aa3.65□□□□□ -1.83
LYSMD3-203ENST00000500869 S4R3F8 94 aa3.65□□□□□ -1.83
LYSMD3-203ENST00000500869 K7ERS5 55 aa3.63□□□□□ -1.83
LYSMD3-203ENST00000500869 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
LYSMD3-203ENST00000500869 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
LYSMD3-203ENST00000500869 ROMO1P60602 79 aa3.61□□□□□ -1.83
LYSMD3-203ENST00000500869 TPRXLQ17RH7 258 aa3.61□□□□□ -1.83
LYSMD3-203ENST00000500869 KRTAP17-1Q9BYP8 105 aa3.61□□□□□ -1.83
LYSMD3-203ENST00000500869 P0C880 135 aa3.55□□□□□ -1.84
LYSMD3-203ENST00000500869 M0QZ58 72 aa3.53□□□□□ -1.84
LYSMD3-203ENST00000500869 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
LYSMD3-203ENST00000500869 LPAP08519 4548 aa3.52□□□□□ -1.85
LYSMD3-203ENST00000500869 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
LYSMD3-203ENST00000500869 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
LYSMD3-203ENST00000500869 EPPK1P58107 5090 aaKnown RBP3.5□□□□□ -1.85
LYSMD3-203ENST00000500869 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
LYSMD3-203ENST00000500869 A0A0D9SG42 100 aa3.45□□□□□ -1.86
LYSMD3-203ENST00000500869 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
LYSMD3-203ENST00000500869 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
LYSMD3-203ENST00000500869 LRP2P98164 4655 aa3.41□□□□□ -1.86
LYSMD3-203ENST00000500869 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
LYSMD3-203ENST00000500869 CRIPTQ9P021 101 aa3.4□□□□□ -1.87
LYSMD3-203ENST00000500869 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
LYSMD3-203ENST00000500869 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
LYSMD3-203ENST00000500869 SPINT4Q6UDR6 99 aa3.35□□□□□ -1.87
LYSMD3-203ENST00000500869 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
LYSMD3-203ENST00000500869 DMBT1Q9UGM3 2413 aaPredicted RBP3.35□□□□□ -1.87
LYSMD3-203ENST00000500869 KRTAP4-5Q9BYR2 181 aa3.34□□□□□ -1.87
LYSMD3-203ENST00000500869 H3BS24 57 aa3.34□□□□□ -1.87
LYSMD3-203ENST00000500869 HERC1Q15751 4861 aa3.33□□□□□ -1.88
LYSMD3-203ENST00000500869 R4GN34 69 aa3.32□□□□□ -1.88
LYSMD3-203ENST00000500869 LORP23490 312 aaPredicted RBP3.3□□□□□ -1.88
LYSMD3-203ENST00000500869 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
LYSMD3-203ENST00000500869 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
LYSMD3-203ENST00000500869 HERC2O95714 4834 aa3.27□□□□□ -1.89
LYSMD3-203ENST00000500869 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
LYSMD3-203ENST00000500869 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
LYSMD3-203ENST00000500869 J3QL48 77 aa3.2□□□□□ -1.9
LYSMD3-203ENST00000500869 PCLOQ9Y6V0 5065 aa3.2□□□□□ -1.9
LYSMD3-203ENST00000500869 MUC2Q02817 5179 aa3.19□□□□□ -1.9
LYSMD3-203ENST00000500869 LCE2AQ5TA79 106 aaPredicted RBP3.19□□□□□ -1.9
LYSMD3-203ENST00000500869 PLAC4Q8WY50 150 aa3.16□□□□□ -1.9
LYSMD3-203ENST00000500869 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
LYSMD3-203ENST00000500869 LCE2CQ5TA81 110 aa3.16□□□□□ -1.9
LYSMD3-203ENST00000500869 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.91
LYSMD3-203ENST00000500869 HMCN2Q8NDA2 5059 aa3.13□□□□□ -1.91
LYSMD3-203ENST00000500869 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
LYSMD3-203ENST00000500869 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
LYSMD3-203ENST00000500869 TNP1P09430 55 aa3.09□□□□□ -1.91
LYSMD3-203ENST00000500869 KRTAP19-1Q8IUB9 90 aa3.08□□□□□ -1.92
LYSMD3-203ENST00000500869 LCE2BO14633 110 aa3.06□□□□□ -1.92
LYSMD3-203ENST00000500869 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
LYSMD3-203ENST00000500869 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
LYSMD3-203ENST00000500869 MT1HP80294 61 aa3.03□□□□□ -1.92
LYSMD3-203ENST00000500869 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
LYSMD3-203ENST00000500869 MT2AP02795 61 aa2.99□□□□□ -1.93
LYSMD3-203ENST00000500869 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
LYSMD3-203ENST00000500869 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
LYSMD3-203ENST00000500869 MT1FP04733 61 aa2.97□□□□□ -1.93
LYSMD3-203ENST00000500869 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
LYSMD3-203ENST00000500869 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
LYSMD3-203ENST00000500869 UBR4Q5T4S7 5183 aa2.93□□□□□ -1.94
LYSMD3-203ENST00000500869 RNF213Q63HN8 5207 aa2.93□□□□□ -1.94
LYSMD3-203ENST00000500869 MT1BP07438 61 aa2.93□□□□□ -1.94
LYSMD3-203ENST00000500869 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
LYSMD3-203ENST00000500869 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
LYSMD3-203ENST00000500869 MT1XP80297 61 aa2.9□□□□□ -1.94
LYSMD3-203ENST00000500869 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
LYSMD3-203ENST00000500869 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
LYSMD3-203ENST00000500869 M0R2T5 61 aa2.86□□□□□ -1.95
LYSMD3-203ENST00000500869 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
LYSMD3-203ENST00000500869 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
LYSMD3-203ENST00000500869 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
LYSMD3-203ENST00000500869 KRTAP10-7P60409 375 aaPredicted RBP2.77□□□□□ -1.97
LYSMD3-203ENST00000500869 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
LYSMD3-203ENST00000500869 KRTAP4-8Q9BYQ9 185 aa2.75□□□□□ -1.97
LYSMD3-203ENST00000500869 INE1O15225 51 aa2.71□□□□□ -1.98
LYSMD3-203ENST00000500869 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
LYSMD3-203ENST00000500869 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
LYSMD3-203ENST00000500869 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
LYSMD3-203ENST00000500869 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
LYSMD3-203ENST00000500869 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
LYSMD3-203ENST00000500869 KRTAP9-2Q9BYQ4 174 aa2.58□□□□□ -2
LYSMD3-203ENST00000500869 USH2AO75445 5202 aa2.57□□□□□ -2
LYSMD3-203ENST00000500869 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
LYSMD3-203ENST00000500869 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
LYSMD3-203ENST00000500869 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
LYSMD3-203ENST00000500869 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.55□□□□□ -2
LYSMD3-203ENST00000500869 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
LYSMD3-203ENST00000500869 KRTAP4-8A0A0G2JLE6 195 aa2.53□□□□□ -2
LYSMD3-203ENST00000500869 KRTAP9-6A0A140TA67 174 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms