RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 KRTAP9-3Q9BYQ3 159 aa7.31□□□□□ -1.24
CPNE1-228ENST00000498814 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
CPNE1-228ENST00000498814 FSIP2Q5CZC0 6907 aa7.25□□□□□ -1.25
CPNE1-228ENST00000498814 NDUFC1O43677 76 aa7.24□□□□□ -1.25
CPNE1-228ENST00000498814 DMAC1Q96GE9 116 aa7.24□□□□□ -1.25
CPNE1-228ENST00000498814 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
CPNE1-228ENST00000498814 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
CPNE1-228ENST00000498814 LCE2BO14633 110 aa7.2□□□□□ -1.26
CPNE1-228ENST00000498814 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
CPNE1-228ENST00000498814 C20orf197Q8N268 126 aa7.18□□□□□ -1.26
CPNE1-228ENST00000498814 USH2AO75445 5202 aa7.17□□□□□ -1.26
CPNE1-228ENST00000498814 ACYP2P14621 99 aa7.12□□□□□ -1.27
CPNE1-228ENST00000498814 H0YAA0 97 aa7.11□□□□□ -1.27
CPNE1-228ENST00000498814 COX7CP15954 63 aa7.11□□□□□ -1.27
CPNE1-228ENST00000498814 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
CPNE1-228ENST00000498814 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
CPNE1-228ENST00000498814 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
CPNE1-228ENST00000498814 SPRR2GQ9BYE4 73 aa7.03□□□□□ -1.28
CPNE1-228ENST00000498814 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
CPNE1-228ENST00000498814 ADM2Q7Z4H4 148 aa7.01□□□□□ -1.29
CPNE1-228ENST00000498814 ANAPC13Q9BS18 74 aa7□□□□□ -1.29
CPNE1-228ENST00000498814 SPTSSBQ8NFR3 76 aa6.98□□□□□ -1.29
CPNE1-228ENST00000498814 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
CPNE1-228ENST00000498814 H7BZZ5 65 aa6.94□□□□□ -1.3
CPNE1-228ENST00000498814 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
CPNE1-228ENST00000498814 CYSTM1Q9H1C7 97 aa6.93□□□□□ -1.3
CPNE1-228ENST00000498814 KRTAP19-6Q3LI70 58 aa6.92□□□□□ -1.3
CPNE1-228ENST00000498814 P0C880 135 aa6.9□□□□□ -1.3
CPNE1-228ENST00000498814 Q5VV11 94 aa6.9□□□□□ -1.3
CPNE1-228ENST00000498814 MT1BP07438 61 aa6.89□□□□□ -1.31
CPNE1-228ENST00000498814 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
CPNE1-228ENST00000498814 COA5Q86WW8 74 aa6.86□□□□□ -1.31
CPNE1-228ENST00000498814 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
CPNE1-228ENST00000498814 R4GN34 69 aa6.82□□□□□ -1.32
CPNE1-228ENST00000498814 M0QZ58 72 aa6.77□□□□□ -1.33
CPNE1-228ENST00000498814 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
CPNE1-228ENST00000498814 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
CPNE1-228ENST00000498814 A6NN06 94 aa6.69□□□□□ -1.34
CPNE1-228ENST00000498814 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
CPNE1-228ENST00000498814 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
CPNE1-228ENST00000498814 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
CPNE1-228ENST00000498814 SEC61GP60059 68 aa6.63□□□□□ -1.35
CPNE1-228ENST00000498814 TMEM258P61165 79 aa6.62□□□□□ -1.35
CPNE1-228ENST00000498814 SERP1Q9Y6X1 66 aa6.61□□□□□ -1.35
CPNE1-228ENST00000498814 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
CPNE1-228ENST00000498814 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
CPNE1-228ENST00000498814 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
CPNE1-228ENST00000498814 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
CPNE1-228ENST00000498814 MT1XP80297 61 aa6.53□□□□□ -1.36
CPNE1-228ENST00000498814 A0A1B0GU33 70 aa6.5□□□□□ -1.37
CPNE1-228ENST00000498814 A0A1B0GU69 56 aa6.5□□□□□ -1.37
CPNE1-228ENST00000498814 SYNE2Q8WXH0 6885 aaKnown RBP6.47□□□□□ -1.37
CPNE1-228ENST00000498814 SPATA8Q6RVD6 105 aa6.43□□□□□ -1.38
CPNE1-228ENST00000498814 LINC01558Q9Y6Z2 57 aa6.41□□□□□ -1.38
CPNE1-228ENST00000498814 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
CPNE1-228ENST00000498814 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
CPNE1-228ENST00000498814 A0A0D9SG42 100 aa6.37□□□□□ -1.39
CPNE1-228ENST00000498814 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
CPNE1-228ENST00000498814 SMIM26A0A096LP01 95 aa6.32□□□□□ -1.4
CPNE1-228ENST00000498814 PCP4P48539 62 aa6.32□□□□□ -1.4
CPNE1-228ENST00000498814 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
CPNE1-228ENST00000498814 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
CPNE1-228ENST00000498814 SPINT4Q6UDR6 99 aa6.27□□□□□ -1.41
CPNE1-228ENST00000498814 A8MU10 97 aa6.25□□□□□ -1.41
CPNE1-228ENST00000498814 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
CPNE1-228ENST00000498814 KRTAP10-12P60413 245 aa6.22□□□□□ -1.41
CPNE1-228ENST00000498814 V9GYY9 64 aa6.22□□□□□ -1.41
CPNE1-228ENST00000498814 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
CPNE1-228ENST00000498814 KMT2DO14686 5537 aa6.21□□□□□ -1.42
CPNE1-228ENST00000498814 UQCR11O14957 56 aa6.2□□□□□ -1.42
CPNE1-228ENST00000498814 Q1T7F1 81 aa6.19□□□□□ -1.42
CPNE1-228ENST00000498814 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
CPNE1-228ENST00000498814 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
CPNE1-228ENST00000498814 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
CPNE1-228ENST00000498814 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
CPNE1-228ENST00000498814 PSPHP1O15172 72 aa6.11□□□□□ -1.43
CPNE1-228ENST00000498814 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
CPNE1-228ENST00000498814 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
CPNE1-228ENST00000498814 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
CPNE1-228ENST00000498814 NEBP20929 6669 aa6.05□□□□□ -1.44
CPNE1-228ENST00000498814 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
CPNE1-228ENST00000498814 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
CPNE1-228ENST00000498814 A6NED7 52 aa5.92□□□□□ -1.46
CPNE1-228ENST00000498814 TNP1P09430 55 aa5.91□□□□□ -1.46
CPNE1-228ENST00000498814 SPRR2EP22531 72 aa5.91□□□□□ -1.46
CPNE1-228ENST00000498814 SPRR2BP35325 72 aa5.91□□□□□ -1.46
CPNE1-228ENST00000498814 SPRR2AP35326 72 aa5.91□□□□□ -1.46
CPNE1-228ENST00000498814 K7ERS5 55 aa5.9□□□□□ -1.46
CPNE1-228ENST00000498814 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
CPNE1-228ENST00000498814 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
CPNE1-228ENST00000498814 KRTAP19-7Q3SYF9 63 aa5.83□□□□□ -1.48
CPNE1-228ENST00000498814 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
CPNE1-228ENST00000498814 H3BS24 57 aa5.82□□□□□ -1.48
CPNE1-228ENST00000498814 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
CPNE1-228ENST00000498814 MT1EP04732 61 aa5.76□□□□□ -1.49
CPNE1-228ENST00000498814 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
CPNE1-228ENST00000498814 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
CPNE1-228ENST00000498814 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
CPNE1-228ENST00000498814 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
CPNE1-228ENST00000498814 SPRR2DP22532 72 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms