RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
HMGXB4-207ENST00000498212 S4R3F8 94 aa3.92□□□□□ -1.78
HMGXB4-207ENST00000498212 FAM236AA0A1B0GUQ0 79 aa3.9□□□□□ -1.79
HMGXB4-207ENST00000498212 FAM236BA0A1B0GV22 79 aa3.9□□□□□ -1.79
HMGXB4-207ENST00000498212 PCP4L1A6NKN8 68 aa3.9□□□□□ -1.79
HMGXB4-207ENST00000498212 LCA10Q71F78 164 aa3.89□□□□□ -1.79
HMGXB4-207ENST00000498212 CSAG1Q6PB30 78 aa3.88□□□□□ -1.79
HMGXB4-207ENST00000498212 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
HMGXB4-207ENST00000498212 TRAV22A0A0B4J277 110 aa3.85□□□□□ -1.79
HMGXB4-207ENST00000498212 ACYP1P07311 99 aa3.85□□□□□ -1.79
HMGXB4-207ENST00000498212 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
HMGXB4-207ENST00000498212 CYP4F30PQ9H0H9 118 aa3.85□□□□□ -1.79
HMGXB4-207ENST00000498212 LOC101927531A0A1B0GV80 90 aa3.83□□□□□ -1.8
HMGXB4-207ENST00000498212 FAM240AA0A1B0GVK7 77 aa3.82□□□□□ -1.8
HMGXB4-207ENST00000498212 HIST1H4AP62805 103 aaKnown RBP3.82□□□□□ -1.8
HMGXB4-207ENST00000498212 ATP5EP2Q5VTU8 51 aa3.82□□□□□ -1.8
HMGXB4-207ENST00000498212 Q5VV11 94 aa3.82□□□□□ -1.8
HMGXB4-207ENST00000498212 KLKP1Q107X0 134 aa3.81□□□□□ -1.8
HMGXB4-207ENST00000498212 SPRR2GQ9BYE4 73 aa3.81□□□□□ -1.8
HMGXB4-207ENST00000498212 MT1BP07438 61 aa3.8□□□□□ -1.8
HMGXB4-207ENST00000498212 A0A087WVE0 104 aa3.79□□□□□ -1.8
HMGXB4-207ENST00000498212 A6NN06 94 aa3.79□□□□□ -1.8
HMGXB4-207ENST00000498212 UQCRQO14949 82 aa3.79□□□□□ -1.8
HMGXB4-207ENST00000498212 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
HMGXB4-207ENST00000498212 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
HMGXB4-207ENST00000498212 H0Y9P7 68 aa3.78□□□□□ -1.8
HMGXB4-207ENST00000498212 ATOX1O00244 68 aa3.78□□□□□ -1.8
HMGXB4-207ENST00000498212 IMUPQ9GZP8 106 aa3.75□□□□□ -1.81
HMGXB4-207ENST00000498212 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
HMGXB4-207ENST00000498212 NDUFC1O43677 76 aa3.74□□□□□ -1.81
HMGXB4-207ENST00000498212 LINC00643Q86TS7 51 aa3.74□□□□□ -1.81
HMGXB4-207ENST00000498212 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
HMGXB4-207ENST00000498212 A8MUN3 132 aa3.72□□□□□ -1.81
HMGXB4-207ENST00000498212 H0YAA0 97 aa3.72□□□□□ -1.81
HMGXB4-207ENST00000498212 LINC00208Q96KT6 92 aa3.72□□□□□ -1.81
HMGXB4-207ENST00000498212 PCP4P48539 62 aa3.69□□□□□ -1.82
HMGXB4-207ENST00000498212 MP68P56378 58 aa3.69□□□□□ -1.82
HMGXB4-207ENST00000498212 A0A1B0GV90 55 aa3.68□□□□□ -1.82
HMGXB4-207ENST00000498212 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
HMGXB4-207ENST00000498212 ADM2Q7Z4H4 148 aa3.67□□□□□ -1.82
HMGXB4-207ENST00000498212 H3BPC8 53 aa3.64□□□□□ -1.83
HMGXB4-207ENST00000498212 J3QR89 54 aa3.63□□□□□ -1.83
HMGXB4-207ENST00000498212 SCGB1A1P11684 91 aa3.61□□□□□ -1.83
HMGXB4-207ENST00000498212 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
HMGXB4-207ENST00000498212 DMAC1Q96GE9 116 aa3.6□□□□□ -1.83
HMGXB4-207ENST00000498212 NEBP20929 6669 aa3.59□□□□□ -1.83
HMGXB4-207ENST00000498212 C20orf197Q8N268 126 aa3.59□□□□□ -1.83
HMGXB4-207ENST00000498212 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
HMGXB4-207ENST00000498212 R4GN34 69 aa3.59□□□□□ -1.83
HMGXB4-207ENST00000498212 P0C880 135 aa3.58□□□□□ -1.84
HMGXB4-207ENST00000498212 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
HMGXB4-207ENST00000498212 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
HMGXB4-207ENST00000498212 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
HMGXB4-207ENST00000498212 M0QZ58 72 aa3.56□□□□□ -1.84
HMGXB4-207ENST00000498212 MT1XP80297 61 aa3.56□□□□□ -1.84
HMGXB4-207ENST00000498212 TRAV7A0A075B6U4 112 aa3.53□□□□□ -1.84
HMGXB4-207ENST00000498212 ACYP2P14621 99 aa3.52□□□□□ -1.85
HMGXB4-207ENST00000498212 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
HMGXB4-207ENST00000498212 LINC01554Q52M75 96 aa3.51□□□□□ -1.85
HMGXB4-207ENST00000498212 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
HMGXB4-207ENST00000498212 MT-ATP8P03928 68 aa3.5□□□□□ -1.85
HMGXB4-207ENST00000498212 SMIM20Q8N5G0 67 aa3.5□□□□□ -1.85
HMGXB4-207ENST00000498212 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
HMGXB4-207ENST00000498212 KMT2DO14686 5537 aa3.49□□□□□ -1.85
HMGXB4-207ENST00000498212 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
HMGXB4-207ENST00000498212 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
HMGXB4-207ENST00000498212 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
HMGXB4-207ENST00000498212 K7ERU9 68 aa3.47□□□□□ -1.85
HMGXB4-207ENST00000498212 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
HMGXB4-207ENST00000498212 SPRR2EP22531 72 aa3.46□□□□□ -1.86
HMGXB4-207ENST00000498212 SPRR2BP35325 72 aa3.46□□□□□ -1.86
HMGXB4-207ENST00000498212 SPRR2AP35326 72 aa3.46□□□□□ -1.86
HMGXB4-207ENST00000498212 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
HMGXB4-207ENST00000498212 CHKB-CPT1BH3BT56 60 aa3.45□□□□□ -1.86
HMGXB4-207ENST00000498212 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
HMGXB4-207ENST00000498212 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
HMGXB4-207ENST00000498212 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
HMGXB4-207ENST00000498212 SNURFQ9Y675 71 aa3.43□□□□□ -1.86
HMGXB4-207ENST00000498212 SPANXA2-OT1Q8N9U9 137 aa3.39□□□□□ -1.87
HMGXB4-207ENST00000498212 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
HMGXB4-207ENST00000498212 SERP2Q8N6R1 65 aa3.36□□□□□ -1.87
HMGXB4-207ENST00000498212 SPRR2DP22532 72 aa3.34□□□□□ -1.87
HMGXB4-207ENST00000498212 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
HMGXB4-207ENST00000498212 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
HMGXB4-207ENST00000498212 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
HMGXB4-207ENST00000498212 CAMK2N1Q7Z7J9 78 aa3.3□□□□□ -1.88
HMGXB4-207ENST00000498212 COA5Q86WW8 74 aa3.3□□□□□ -1.88
HMGXB4-207ENST00000498212 SEC61GP60059 68 aa3.27□□□□□ -1.89
HMGXB4-207ENST00000498212 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
HMGXB4-207ENST00000498212 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
HMGXB4-207ENST00000498212 COX7CP15954 63 aa3.25□□□□□ -1.89
HMGXB4-207ENST00000498212 A0A0D9SG42 100 aa3.23□□□□□ -1.89
HMGXB4-207ENST00000498212 SPATA8Q6RVD6 105 aa3.22□□□□□ -1.89
HMGXB4-207ENST00000498212 A0A1B0GU33 70 aa3.21□□□□□ -1.9
HMGXB4-207ENST00000498212 H7BZZ5 65 aa3.21□□□□□ -1.9
HMGXB4-207ENST00000498212 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
HMGXB4-207ENST00000498212 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
HMGXB4-207ENST00000498212 CYSTM1Q9H1C7 97 aa3.2□□□□□ -1.9
HMGXB4-207ENST00000498212 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
HMGXB4-207ENST00000498212 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms