RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 TSC22D3Q99576 134 aa-1.14□□□□□ -2.59
SMC4-227ENST00000497984 ARHGAP5Q13017 1502 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 TCHHQ07283 1943 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 AKAP12Q02952 1782 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 SAMD9Q5K651 1589 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 F6UZH7 168 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 COX6CP09669 75 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 NCBP2-AS2Q69YL0 99 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 CPS1P31327 1500 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 SYCP2Q9BX26 1530 aa-1.15□□□□□ -2.59
SMC4-227ENST00000497984 SPTY2D1-AS1A0A0U1RR47 76 aa-1.16□□□□□ -2.6
SMC4-227ENST00000497984 TRAPPC2P0DI81 140 aa-1.16□□□□□ -2.6
SMC4-227ENST00000497984 TRAPPC2BP0DI82 140 aa-1.16□□□□□ -2.6
SMC4-227ENST00000497984 ATP5EP56381 51 aaPredicted RBP-1.16□□□□□ -2.6
SMC4-227ENST00000497984 C6orf48Q9UBA6 75 aa-1.16□□□□□ -2.6
SMC4-227ENST00000497984 KAAG1Q9UBP8 84 aa-1.16□□□□□ -2.6
SMC4-227ENST00000497984 Q9Y3F1 56 aa-1.16□□□□□ -2.6
SMC4-227ENST00000497984 CLTCQ00610 1675 aaKnown RBP-1.16□□□□□ -2.6
SMC4-227ENST00000497984 PRXQ9BXM0 1461 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 ETDCA0A1B0GVM5 59 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 TMEM262E9PQX1 116 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 H3BQF6 201 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 ARMS2P0C7Q2 107 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 DEFB131AP59861 70 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 S100A12P80511 92 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 C1orf54Q8WWF1 131 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 SMIM2Q9BVW6 85 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 PSENENQ9NZ42 101 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 PRO1854Q9UHT4 67 aa-1.17□□□□□ -2.6
SMC4-227ENST00000497984 CCNB3Q8WWL7 1395 aa-1.18□□□□□ -2.6
SMC4-227ENST00000497984 A0A087WWC5 75 aa-1.18□□□□□ -2.6
SMC4-227ENST00000497984 SNAPC5O75971 98 aa-1.18□□□□□ -2.6
SMC4-227ENST00000497984 S100A8P05109 93 aa-1.18□□□□□ -2.6
SMC4-227ENST00000497984 GNGT1P63211 74 aa-1.18□□□□□ -2.6
SMC4-227ENST00000497984 PSMG4Q5JS54 123 aa-1.18□□□□□ -2.6
SMC4-227ENST00000497984 C12orf57Q99622 126 aa-1.18□□□□□ -2.6
SMC4-227ENST00000497984 H0Y9P7 68 aa-1.19□□□□□ -2.6
SMC4-227ENST00000497984 FCER1GP30273 86 aa-1.19□□□□□ -2.6
SMC4-227ENST00000497984 KCNQ1DNQ9H478 68 aa-1.19□□□□□ -2.6
SMC4-227ENST00000497984 CLTCL1P53675 1640 aa-1.19□□□□□ -2.6
SMC4-227ENST00000497984 IQGAP2Q13576 1575 aa-1.2□□□□□ -2.6
SMC4-227ENST00000497984 NAP1L6A6NFF2 107 aa-1.2□□□□□ -2.6
SMC4-227ENST00000497984 NDUFA1O15239 70 aa-1.2□□□□□ -2.6
SMC4-227ENST00000497984 NDUFB1O75438 58 aa-1.2□□□□□ -2.6
SMC4-227ENST00000497984 HMGN1P05114 100 aa-1.2□□□□□ -2.6
SMC4-227ENST00000497984 MINOS1Q5TGZ0 78 aa-1.2□□□□□ -2.6
SMC4-227ENST00000497984 VAMP8Q9BV40 100 aa-1.2□□□□□ -2.6
SMC4-227ENST00000497984 ABRACLQ9P1F3 81 aa-1.2□□□□□ -2.6
SMC4-227ENST00000497984 MROH2BQ7Z745 1585 aa-1.21□□□□□ -2.6
SMC4-227ENST00000497984 CNTLNQ9NXG0 1405 aa-1.21□□□□□ -2.6
SMC4-227ENST00000497984 hADV29S1A0JD25 119 aa-1.21□□□□□ -2.6
SMC4-227ENST00000497984 H3BUT2 72 aa-1.21□□□□□ -2.6
SMC4-227ENST00000497984 CRIP1P50238 77 aa-1.21□□□□□ -2.6
SMC4-227ENST00000497984 DEFB107AQ8IZN7 70 aa-1.21□□□□□ -2.6
SMC4-227ENST00000497984 IER3IP1Q9Y5U9 82 aa-1.21□□□□□ -2.6
SMC4-227ENST00000497984 SMIM27A0A1W2PRY6 76 aa-1.22□□□□□ -2.6
SMC4-227ENST00000497984 ATP6V1G2-DDX39BF2Z307 99 aa-1.22□□□□□ -2.6
SMC4-227ENST00000497984 LEPROTL1O95214 131 aa-1.22□□□□□ -2.6
SMC4-227ENST00000497984 PKIAP61925 76 aa-1.22□□□□□ -2.6
SMC4-227ENST00000497984 HSD52Q0P140 79 aa-1.22□□□□□ -2.6
SMC4-227ENST00000497984 TOMM7Q9P0U1 55 aa-1.22□□□□□ -2.6
SMC4-227ENST00000497984 HILPDAQ9Y5L2 63 aa-1.22□□□□□ -2.6
SMC4-227ENST00000497984 EFCAB5A4FU69 1503 aa-1.23□□□□□ -2.61
SMC4-227ENST00000497984 CRYM-AS1A6NIL9 109 aa-1.23□□□□□ -2.61
SMC4-227ENST00000497984 SARNPP82979 210 aaKnown RBP-1.23□□□□□ -2.61
SMC4-227ENST00000497984 SMIM5Q71RC9 77 aa-1.23□□□□□ -2.61
SMC4-227ENST00000497984 AP4S1Q9Y587 144 aa-1.23□□□□□ -2.61
SMC4-227ENST00000497984 IQGAP3Q86VI3 1631 aa-1.23□□□□□ -2.61
SMC4-227ENST00000497984 M0R1W7 72 aa-1.24□□□□□ -2.61
SMC4-227ENST00000497984 RPL13AP3Q6NVV1 102 aa-1.24□□□□□ -2.61
SMC4-227ENST00000497984 SVBPQ8N300 66 aa-1.24□□□□□ -2.61
SMC4-227ENST00000497984 TMEM167AQ8TBQ9 72 aa-1.24□□□□□ -2.61
SMC4-227ENST00000497984 CGREF1Q99674 301 aa-1.24□□□□□ -2.61
SMC4-227ENST00000497984 C20orf78Q9BR46 151 aa-1.24□□□□□ -2.61
SMC4-227ENST00000497984 CEP162Q5TB80 1403 aa-1.24□□□□□ -2.61
SMC4-227ENST00000497984 TTC37Q6PGP7 1564 aa-1.25□□□□□ -2.61
SMC4-227ENST00000497984 TRBV25-1A0A075B6N4 114 aa-1.25□□□□□ -2.61
SMC4-227ENST00000497984 TMEM218A2RU14 115 aa-1.25□□□□□ -2.61
SMC4-227ENST00000497984 HMGN2P05204 90 aaKnown RBP-1.25□□□□□ -2.61
SMC4-227ENST00000497984 PRCDQ00LT1 54 aa-1.25□□□□□ -2.61
SMC4-227ENST00000497984 H3BQ15 152 aa-1.26□□□□□ -2.61
SMC4-227ENST00000497984 GNG4P50150 75 aa-1.26□□□□□ -2.61
SMC4-227ENST00000497984 KRTDAPP60985 99 aa-1.26□□□□□ -2.61
SMC4-227ENST00000497984 PPP3R1P63098 170 aa-1.26□□□□□ -2.61
SMC4-227ENST00000497984 RPL38P63173 70 aaKnown RBP-1.26□□□□□ -2.61
SMC4-227ENST00000497984 C2orf88Q9BSF0 95 aa-1.26□□□□□ -2.61
SMC4-227ENST00000497984 SNHG12Q9BXW3 62 aa-1.26□□□□□ -2.61
SMC4-227ENST00000497984 NMES1Q9C002 83 aa-1.26□□□□□ -2.61
SMC4-227ENST00000497984 A0A1B0GV90 55 aa-1.27□□□□□ -2.61
SMC4-227ENST00000497984 DLEU1O43261 78 aa-1.27□□□□□ -2.61
SMC4-227ENST00000497984 UQCRHP07919 91 aa-1.27□□□□□ -2.61
SMC4-227ENST00000497984 ACBD7Q8N6N7 88 aa-1.27□□□□□ -2.61
SMC4-227ENST00000497984 TMEM203Q969S6 136 aa-1.27□□□□□ -2.61
SMC4-227ENST00000497984 SAMD9LQ8IVG5 1584 aa-1.28□□□□□ -2.61
SMC4-227ENST00000497984 ATOX1O00244 68 aa-1.28□□□□□ -2.61
SMC4-227ENST00000497984 GYPAP02724 150 aa-1.28□□□□□ -2.61
SMC4-227ENST00000497984 PMCHL1Q16048 86 aa-1.28□□□□□ -2.61
SMC4-227ENST00000497984 CORTO00230 105 aa-1.29□□□□□ -2.62
SMC4-227ENST00000497984 MRPL33O75394 65 aaKnown RBP-1.29□□□□□ -2.62
SMC4-227ENST00000497984 IFI27P40305 119 aaPredicted RBP-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms