RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 USH2AO75445 5202 aa9.18□□□□□ -0.94
ELL3-208ENST00000497700 KRTAP9-8Q9BYQ0 159 aa9.18□□□□□ -0.94
ELL3-208ENST00000497700 LOC101927531A0A1B0GV80 90 aa9.16□□□□□ -0.94
ELL3-208ENST00000497700 IGKV2-30P06310 120 aa9.15□□□□□ -0.94
ELL3-208ENST00000497700 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
ELL3-208ENST00000497700 IGKV2D-30A0A075B6S6 120 aa9.09□□□□□ -0.95
ELL3-208ENST00000497700 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
ELL3-208ENST00000497700 SPINK7P58062 85 aa9.06□□□□□ -0.96
ELL3-208ENST00000497700 MT2AP02795 61 aa9.02□□□□□ -0.97
ELL3-208ENST00000497700 FCGBPQ9Y6R7 5405 aaPredicted RBP9.01□□□□□ -0.97
ELL3-208ENST00000497700 LCE2BO14633 110 aa8.97□□□□□ -0.97
ELL3-208ENST00000497700 MT1FP04733 61 aa8.97□□□□□ -0.97
ELL3-208ENST00000497700 HRES1P13985 223 aa8.96□□□□□ -0.98
ELL3-208ENST00000497700 KRTAP19-1Q8IUB9 90 aa8.96□□□□□ -0.98
ELL3-208ENST00000497700 KRTAP9-3Q9BYQ3 159 aa8.89□□□□□ -0.99
ELL3-208ENST00000497700 V9GYY9 64 aa8.88□□□□□ -0.99
ELL3-208ENST00000497700 KRTAP10-10P60014 251 aa8.87□□□□□ -0.99
ELL3-208ENST00000497700 C4orf26Q17RF5 130 aa8.87□□□□□ -0.99
ELL3-208ENST00000497700 COA5Q86WW8 74 aa8.87□□□□□ -0.99
ELL3-208ENST00000497700 Q1T7F1 81 aa8.86□□□□□ -0.99
ELL3-208ENST00000497700 ACYP2P14621 99 aa8.85□□□□□ -0.99
ELL3-208ENST00000497700 MPLKIPQ8TAP9 179 aa8.84□□□□□ -0.99
ELL3-208ENST00000497700 DMAC1Q96GE9 116 aa8.81□□□□□ -1
ELL3-208ENST00000497700 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
ELL3-208ENST00000497700 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1.01
ELL3-208ENST00000497700 A8MUN3 132 aa8.76□□□□□ -1.01
ELL3-208ENST00000497700 MACF1Q9UPN3 7388 aaKnown RBP8.72□□□□□ -1.01
ELL3-208ENST00000497700 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
ELL3-208ENST00000497700 CHKB-CPT1BH3BT56 60 aa8.68□□□□□ -1.02
ELL3-208ENST00000497700 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
ELL3-208ENST00000497700 KRTAP19-6Q3LI70 58 aa8.65□□□□□ -1.02
ELL3-208ENST00000497700 H1FX-AS1Q4G0G2 97 aa8.65□□□□□ -1.02
ELL3-208ENST00000497700 PSPHP1O15172 72 aa8.58□□□□□ -1.04
ELL3-208ENST00000497700 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
ELL3-208ENST00000497700 Q5VV11 94 aa8.55□□□□□ -1.04
ELL3-208ENST00000497700 SPTSSBQ8NFR3 76 aa8.54□□□□□ -1.04
ELL3-208ENST00000497700 S4R3F8 94 aa8.54□□□□□ -1.04
ELL3-208ENST00000497700 LCA10Q71F78 164 aa8.5□□□□□ -1.05
ELL3-208ENST00000497700 PRO0628Q9UI54 55 aa8.49□□□□□ -1.05
ELL3-208ENST00000497700 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
ELL3-208ENST00000497700 BRK1Q8WUW1 75 aa8.47□□□□□ -1.05
ELL3-208ENST00000497700 KRTAP6-3Q3LI67 103 aa8.45□□□□□ -1.06
ELL3-208ENST00000497700 SVIPQ8NHG7 77 aa8.44□□□□□ -1.06
ELL3-208ENST00000497700 A0A1B0GU69 56 aa8.4□□□□□ -1.06
ELL3-208ENST00000497700 A6NED7 52 aa8.38□□□□□ -1.07
ELL3-208ENST00000497700 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
ELL3-208ENST00000497700 SEC61GP60059 68 aa8.34□□□□□ -1.07
ELL3-208ENST00000497700 CDC42SE1Q9NRR8 79 aa8.31□□□□□ -1.08
ELL3-208ENST00000497700 UQCR11O14957 56 aa8.23□□□□□ -1.09
ELL3-208ENST00000497700 NEBP20929 6669 aa8.2□□□□□ -1.1
ELL3-208ENST00000497700 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
ELL3-208ENST00000497700 H0YAA0 97 aa8.18□□□□□ -1.1
ELL3-208ENST00000497700 MUC12Q9UKN1 5478 aa8.15□□□□□ -1.1
ELL3-208ENST00000497700 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.1
ELL3-208ENST00000497700 MIR22HGQ0VDD5 57 aa8.14□□□□□ -1.11
ELL3-208ENST00000497700 A6NN06 94 aa8.13□□□□□ -1.11
ELL3-208ENST00000497700 MT1BP07438 61 aa8.13□□□□□ -1.11
ELL3-208ENST00000497700 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
ELL3-208ENST00000497700 A8MU10 97 aa8.11□□□□□ -1.11
ELL3-208ENST00000497700 A0A1B0GU33 70 aa8.07□□□□□ -1.12
ELL3-208ENST00000497700 P0C880 135 aa8.07□□□□□ -1.12
ELL3-208ENST00000497700 PMAIP1Q13794 54 aa8.05□□□□□ -1.12
ELL3-208ENST00000497700 KRTAP20-1Q3LI63 56 aa8.03□□□□□ -1.12
ELL3-208ENST00000497700 KRTAP19-8Q3LI54 63 aa8□□□□□ -1.13
ELL3-208ENST00000497700 KRTAP10-5P60370 271 aa7.97□□□□□ -1.13
ELL3-208ENST00000497700 SPRR2GQ9BYE4 73 aa7.97□□□□□ -1.13
ELL3-208ENST00000497700 KRTAP5-9P26371 169 aa7.91□□□□□ -1.14
ELL3-208ENST00000497700 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
ELL3-208ENST00000497700 KMT2DO14686 5537 aa7.88□□□□□ -1.15
ELL3-208ENST00000497700 M0QZ58 72 aa7.87□□□□□ -1.15
ELL3-208ENST00000497700 MDN1Q9NU22 5596 aa7.86□□□□□ -1.15
ELL3-208ENST00000497700 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
ELL3-208ENST00000497700 R4GN34 69 aa7.84□□□□□ -1.15
ELL3-208ENST00000497700 KTN1-AS1Q86SY8 53 aa7.81□□□□□ -1.16
ELL3-208ENST00000497700 K7ERS5 55 aa7.8□□□□□ -1.16
ELL3-208ENST00000497700 KRTAP2-3P0C7H8 128 aa7.68□□□□□ -1.18
ELL3-208ENST00000497700 KRTAP2-4Q9BYR9 128 aa7.68□□□□□ -1.18
ELL3-208ENST00000497700 A0A0D9SG42 100 aa7.67□□□□□ -1.18
ELL3-208ENST00000497700 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
ELL3-208ENST00000497700 SPRR2FQ96RM1 72 aa7.64□□□□□ -1.19
ELL3-208ENST00000497700 SPRR2EP22531 72 aa7.62□□□□□ -1.19
ELL3-208ENST00000497700 SPRR2BP35325 72 aa7.62□□□□□ -1.19
ELL3-208ENST00000497700 SPRR2AP35326 72 aa7.62□□□□□ -1.19
ELL3-208ENST00000497700 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
ELL3-208ENST00000497700 MT1XP80297 61 aa7.52□□□□□ -1.21
ELL3-208ENST00000497700 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
ELL3-208ENST00000497700 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
ELL3-208ENST00000497700 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
ELL3-208ENST00000497700 ROMO1P60602 79 aa7.47□□□□□ -1.21
ELL3-208ENST00000497700 LCE1AQ5T7P2 110 aa7.46□□□□□ -1.22
ELL3-208ENST00000497700 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
ELL3-208ENST00000497700 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
ELL3-208ENST00000497700 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
ELL3-208ENST00000497700 KRTAP2-2Q9BYT5 123 aa7.42□□□□□ -1.22
ELL3-208ENST00000497700 KRTAP2-1Q9BYU5 128 aa7.42□□□□□ -1.22
ELL3-208ENST00000497700 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
ELL3-208ENST00000497700 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
ELL3-208ENST00000497700 SPRR2DP22532 72 aa7.36□□□□□ -1.23
ELL3-208ENST00000497700 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
ELL3-208ENST00000497700 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms