RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 VPS13BQ7Z7G8 4022 aa8.25□□□□□ -1.09
MACF1-223ENST00000496360 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
MACF1-223ENST00000496360 FLG2Q5D862 2391 aaPredicted RBP8.19□□□□□ -1.1
MACF1-223ENST00000496360 P0C880 135 aa8.14□□□□□ -1.11
MACF1-223ENST00000496360 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
MACF1-223ENST00000496360 RPS29P62273 56 aaKnown RBP8.12□□□□□ -1.11
MACF1-223ENST00000496360 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
MACF1-223ENST00000496360 KRTAP10-4P60372 401 aaPredicted RBP8.11□□□□□ -1.11
MACF1-223ENST00000496360 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
MACF1-223ENST00000496360 COX6B2Q6YFQ2 88 aa8.04□□□□□ -1.12
MACF1-223ENST00000496360 J3QL48 77 aa8.03□□□□□ -1.12
MACF1-223ENST00000496360 KRTAP3-1Q9BYR8 98 aa8.03□□□□□ -1.12
MACF1-223ENST00000496360 HERC1Q15751 4861 aa8.03□□□□□ -1.12
MACF1-223ENST00000496360 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.12
MACF1-223ENST00000496360 PKHD1L1Q86WI1 4243 aa8.01□□□□□ -1.13
MACF1-223ENST00000496360 RPL37P61927 97 aaKnown RBP8.01□□□□□ -1.13
MACF1-223ENST00000496360 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
MACF1-223ENST00000496360 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
MACF1-223ENST00000496360 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
MACF1-223ENST00000496360 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.13
MACF1-223ENST00000496360 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
MACF1-223ENST00000496360 KRTAP15-1Q3LI76 137 aa7.88□□□□□ -1.15
MACF1-223ENST00000496360 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
MACF1-223ENST00000496360 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
MACF1-223ENST00000496360 NDUFAF8A1L188 74 aa7.8□□□□□ -1.16
MACF1-223ENST00000496360 TNXBP22105 4242 aa7.77□□□□□ -1.17
MACF1-223ENST00000496360 C9orf92A6NGG3 77 aa7.76□□□□□ -1.17
MACF1-223ENST00000496360 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
MACF1-223ENST00000496360 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
MACF1-223ENST00000496360 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
MACF1-223ENST00000496360 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
MACF1-223ENST00000496360 A0A0D9SG42 100 aa7.7□□□□□ -1.18
MACF1-223ENST00000496360 S4R3F8 94 aa7.69□□□□□ -1.18
MACF1-223ENST00000496360 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
MACF1-223ENST00000496360 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
MACF1-223ENST00000496360 XP32Q5T750 250 aa7.6□□□□□ -1.19
MACF1-223ENST00000496360 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
MACF1-223ENST00000496360 LRP2P98164 4655 aa7.54□□□□□ -1.2
MACF1-223ENST00000496360 UBR4Q5T4S7 5183 aa7.53□□□□□ -1.2
MACF1-223ENST00000496360 KRTAP12-1P59990 96 aa7.53□□□□□ -1.2
MACF1-223ENST00000496360 M0QZ58 72 aa7.48□□□□□ -1.21
MACF1-223ENST00000496360 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
MACF1-223ENST00000496360 LPAP08519 4548 aa7.4□□□□□ -1.22
MACF1-223ENST00000496360 LUZP6Q538Z0 58 aa7.34□□□□□ -1.23
MACF1-223ENST00000496360 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
MACF1-223ENST00000496360 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
MACF1-223ENST00000496360 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
MACF1-223ENST00000496360 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
MACF1-223ENST00000496360 MUC2Q02817 5179 aa7.11□□□□□ -1.27
MACF1-223ENST00000496360 R4GN34 69 aa7.07□□□□□ -1.28
MACF1-223ENST00000496360 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
MACF1-223ENST00000496360 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
MACF1-223ENST00000496360 KRTAP4-1Q9BYQ7 146 aa6.94□□□□□ -1.3
MACF1-223ENST00000496360 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
MACF1-223ENST00000496360 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
MACF1-223ENST00000496360 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
MACF1-223ENST00000496360 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
MACF1-223ENST00000496360 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
MACF1-223ENST00000496360 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
MACF1-223ENST00000496360 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
MACF1-223ENST00000496360 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
MACF1-223ENST00000496360 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
MACF1-223ENST00000496360 MT1HP80294 61 aa6.67□□□□□ -1.34
MACF1-223ENST00000496360 TNP1P09430 55 aa6.65□□□□□ -1.35
MACF1-223ENST00000496360 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
MACF1-223ENST00000496360 M0R2T5 61 aa6.56□□□□□ -1.36
MACF1-223ENST00000496360 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
MACF1-223ENST00000496360 INE1O15225 51 aa6.5□□□□□ -1.37
MACF1-223ENST00000496360 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
MACF1-223ENST00000496360 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
MACF1-223ENST00000496360 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
MACF1-223ENST00000496360 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
MACF1-223ENST00000496360 MT2AP02795 61 aa6.24□□□□□ -1.41
MACF1-223ENST00000496360 MT1FP04733 61 aa6.19□□□□□ -1.42
MACF1-223ENST00000496360 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
MACF1-223ENST00000496360 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
MACF1-223ENST00000496360 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
MACF1-223ENST00000496360 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
MACF1-223ENST00000496360 USH2AO75445 5202 aa6.1□□□□□ -1.43
MACF1-223ENST00000496360 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
MACF1-223ENST00000496360 LCE2BO14633 110 aa6.08□□□□□ -1.44
MACF1-223ENST00000496360 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
MACF1-223ENST00000496360 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
MACF1-223ENST00000496360 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
MACF1-223ENST00000496360 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
MACF1-223ENST00000496360 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
MACF1-223ENST00000496360 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
MACF1-223ENST00000496360 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
MACF1-223ENST00000496360 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
MACF1-223ENST00000496360 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
MACF1-223ENST00000496360 MACF1Q9UPN3 7388 aaKnown RBP5.73□□□□□ -1.49
MACF1-223ENST00000496360 MT1BP07438 61 aa5.7□□□□□ -1.5
MACF1-223ENST00000496360 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
MACF1-223ENST00000496360 MT1XP80297 61 aa5.65□□□□□ -1.5
MACF1-223ENST00000496360 SYNE2Q8WXH0 6885 aaKnown RBP5.65□□□□□ -1.5
MACF1-223ENST00000496360 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
MACF1-223ENST00000496360 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
MACF1-223ENST00000496360 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
MACF1-223ENST00000496360 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
MACF1-223ENST00000496360 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms