RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 ACYP2P14621 99 aa4.75□□□□□ -1.65
ACTN4-207ENST00000495553 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
ACTN4-207ENST00000495553 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
ACTN4-207ENST00000495553 TMEM258P61165 79 aa4.72□□□□□ -1.65
ACTN4-207ENST00000495553 S4R3F8 94 aa4.72□□□□□ -1.65
ACTN4-207ENST00000495553 CHKB-CPT1BH3BT56 60 aa4.7□□□□□ -1.66
ACTN4-207ENST00000495553 CYSTM1Q9H1C7 97 aa4.7□□□□□ -1.66
ACTN4-207ENST00000495553 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
ACTN4-207ENST00000495553 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
ACTN4-207ENST00000495553 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
ACTN4-207ENST00000495553 CSAG1Q6PB30 78 aa4.65□□□□□ -1.67
ACTN4-207ENST00000495553 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
ACTN4-207ENST00000495553 LCA10Q71F78 164 aa4.64□□□□□ -1.67
ACTN4-207ENST00000495553 COA5Q86WW8 74 aa4.62□□□□□ -1.67
ACTN4-207ENST00000495553 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
ACTN4-207ENST00000495553 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
ACTN4-207ENST00000495553 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
ACTN4-207ENST00000495553 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
ACTN4-207ENST00000495553 SEC61GP60059 68 aa4.52□□□□□ -1.69
ACTN4-207ENST00000495553 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
ACTN4-207ENST00000495553 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
ACTN4-207ENST00000495553 H0YAA0 97 aa4.5□□□□□ -1.69
ACTN4-207ENST00000495553 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
ACTN4-207ENST00000495553 MT2AP02795 61 aa4.49□□□□□ -1.69
ACTN4-207ENST00000495553 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
ACTN4-207ENST00000495553 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
ACTN4-207ENST00000495553 ADM2Q7Z4H4 148 aa4.46□□□□□ -1.7
ACTN4-207ENST00000495553 MT1FP04733 61 aa4.45□□□□□ -1.7
ACTN4-207ENST00000495553 PRR15LQ9BU68 103 aa4.45□□□□□ -1.7
ACTN4-207ENST00000495553 V9GYY9 64 aa4.44□□□□□ -1.7
ACTN4-207ENST00000495553 A0A1B0GU69 56 aa4.43□□□□□ -1.7
ACTN4-207ENST00000495553 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
ACTN4-207ENST00000495553 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
ACTN4-207ENST00000495553 USH2AO75445 5202 aa4.4□□□□□ -1.7
ACTN4-207ENST00000495553 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
ACTN4-207ENST00000495553 CRCT1Q9UGL9 99 aa4.39□□□□□ -1.71
ACTN4-207ENST00000495553 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
ACTN4-207ENST00000495553 R4GN34 69 aa4.37□□□□□ -1.71
ACTN4-207ENST00000495553 P0C880 135 aa4.35□□□□□ -1.71
ACTN4-207ENST00000495553 Q1T7F1 81 aa4.35□□□□□ -1.71
ACTN4-207ENST00000495553 A0A1B0GU33 70 aa4.33□□□□□ -1.72
ACTN4-207ENST00000495553 M0QZ58 72 aa4.33□□□□□ -1.72
ACTN4-207ENST00000495553 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
ACTN4-207ENST00000495553 PSPHP1O15172 72 aa4.28□□□□□ -1.72
ACTN4-207ENST00000495553 UQCR11O14957 56 aa4.27□□□□□ -1.73
ACTN4-207ENST00000495553 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
ACTN4-207ENST00000495553 Q5VV11 94 aa4.26□□□□□ -1.73
ACTN4-207ENST00000495553 LINC01554Q52M75 96 aa4.25□□□□□ -1.73
ACTN4-207ENST00000495553 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
ACTN4-207ENST00000495553 A6NED7 52 aa4.21□□□□□ -1.74
ACTN4-207ENST00000495553 SPATA8Q6RVD6 105 aa4.2□□□□□ -1.74
ACTN4-207ENST00000495553 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
ACTN4-207ENST00000495553 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
ACTN4-207ENST00000495553 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
ACTN4-207ENST00000495553 A0A0D9SG42 100 aa4.17□□□□□ -1.74
ACTN4-207ENST00000495553 A6NN06 94 aa4.17□□□□□ -1.74
ACTN4-207ENST00000495553 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
ACTN4-207ENST00000495553 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
ACTN4-207ENST00000495553 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
ACTN4-207ENST00000495553 K7ERS5 55 aa4.14□□□□□ -1.75
ACTN4-207ENST00000495553 MT1BP07438 61 aa4.12□□□□□ -1.75
ACTN4-207ENST00000495553 SPINT4Q6UDR6 99 aa4.11□□□□□ -1.75
ACTN4-207ENST00000495553 A8MU10 97 aa4.1□□□□□ -1.75
ACTN4-207ENST00000495553 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
ACTN4-207ENST00000495553 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.76
ACTN4-207ENST00000495553 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
ACTN4-207ENST00000495553 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
ACTN4-207ENST00000495553 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
ACTN4-207ENST00000495553 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
ACTN4-207ENST00000495553 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
ACTN4-207ENST00000495553 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
ACTN4-207ENST00000495553 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
ACTN4-207ENST00000495553 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
ACTN4-207ENST00000495553 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
ACTN4-207ENST00000495553 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
ACTN4-207ENST00000495553 MT1XP80297 61 aa3.92□□□□□ -1.78
ACTN4-207ENST00000495553 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
ACTN4-207ENST00000495553 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
ACTN4-207ENST00000495553 TNP1P09430 55 aa3.85□□□□□ -1.79
ACTN4-207ENST00000495553 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
ACTN4-207ENST00000495553 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
ACTN4-207ENST00000495553 KMT2DO14686 5537 aa3.83□□□□□ -1.8
ACTN4-207ENST00000495553 ROMO1P60602 79 aa3.83□□□□□ -1.8
ACTN4-207ENST00000495553 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
ACTN4-207ENST00000495553 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
ACTN4-207ENST00000495553 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
ACTN4-207ENST00000495553 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
ACTN4-207ENST00000495553 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
ACTN4-207ENST00000495553 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
ACTN4-207ENST00000495553 NEBP20929 6669 aa3.77□□□□□ -1.81
ACTN4-207ENST00000495553 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
ACTN4-207ENST00000495553 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
ACTN4-207ENST00000495553 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
ACTN4-207ENST00000495553 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
ACTN4-207ENST00000495553 KRTAP8-1Q8IUC2 63 aa3.73□□□□□ -1.81
ACTN4-207ENST00000495553 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
ACTN4-207ENST00000495553 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
ACTN4-207ENST00000495553 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
ACTN4-207ENST00000495553 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
ACTN4-207ENST00000495553 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms