RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
CSNK1E-213ENST00000495232 NDUFC1O43677 76 aa5.68□□□□□ -1.5
CSNK1E-213ENST00000495232 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
CSNK1E-213ENST00000495232 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
CSNK1E-213ENST00000495232 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.5
CSNK1E-213ENST00000495232 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
CSNK1E-213ENST00000495232 DMAC1Q96GE9 116 aa5.62□□□□□ -1.51
CSNK1E-213ENST00000495232 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
CSNK1E-213ENST00000495232 ACYP2P14621 99 aa5.58□□□□□ -1.52
CSNK1E-213ENST00000495232 USH2AO75445 5202 aa5.58□□□□□ -1.52
CSNK1E-213ENST00000495232 LCE2BO14633 110 aa5.57□□□□□ -1.52
CSNK1E-213ENST00000495232 COX7CP15954 63 aa5.53□□□□□ -1.52
CSNK1E-213ENST00000495232 H0YAA0 97 aa5.52□□□□□ -1.53
CSNK1E-213ENST00000495232 SPANXA2-OT1Q8N9U9 137 aa5.52□□□□□ -1.53
CSNK1E-213ENST00000495232 CHKB-CPT1BH3BT56 60 aa5.51□□□□□ -1.53
CSNK1E-213ENST00000495232 ADM2Q7Z4H4 148 aa5.5□□□□□ -1.53
CSNK1E-213ENST00000495232 SPTSSBQ8NFR3 76 aa5.5□□□□□ -1.53
CSNK1E-213ENST00000495232 CRIPTQ9P021 101 aa5.49□□□□□ -1.53
CSNK1E-213ENST00000495232 ANAPC13Q9BS18 74 aa5.48□□□□□ -1.53
CSNK1E-213ENST00000495232 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
CSNK1E-213ENST00000495232 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
CSNK1E-213ENST00000495232 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
CSNK1E-213ENST00000495232 SPRR2GQ9BYE4 73 aa5.44□□□□□ -1.54
CSNK1E-213ENST00000495232 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
CSNK1E-213ENST00000495232 Q5VV11 94 aa5.4□□□□□ -1.54
CSNK1E-213ENST00000495232 H7BZZ5 65 aa5.38□□□□□ -1.55
CSNK1E-213ENST00000495232 P0C880 135 aa5.36□□□□□ -1.55
CSNK1E-213ENST00000495232 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
CSNK1E-213ENST00000495232 CYSTM1Q9H1C7 97 aa5.36□□□□□ -1.55
CSNK1E-213ENST00000495232 R4GN34 69 aa5.36□□□□□ -1.55
CSNK1E-213ENST00000495232 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
CSNK1E-213ENST00000495232 COA5Q86WW8 74 aa5.35□□□□□ -1.55
CSNK1E-213ENST00000495232 FCGBPQ9Y6R7 5405 aaPredicted RBP5.33□□□□□ -1.56
CSNK1E-213ENST00000495232 CCDC179H3BU77 68 aa5.32□□□□□ -1.56
CSNK1E-213ENST00000495232 MT1BP07438 61 aa5.32□□□□□ -1.56
CSNK1E-213ENST00000495232 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
CSNK1E-213ENST00000495232 M0QZ58 72 aa5.31□□□□□ -1.56
CSNK1E-213ENST00000495232 SEC61GP60059 68 aa5.26□□□□□ -1.57
CSNK1E-213ENST00000495232 A6NN06 94 aa5.25□□□□□ -1.57
CSNK1E-213ENST00000495232 ATP5EP56381 51 aaPredicted RBP5.24□□□□□ -1.57
CSNK1E-213ENST00000495232 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
CSNK1E-213ENST00000495232 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
CSNK1E-213ENST00000495232 SERP1Q9Y6X1 66 aa5.23□□□□□ -1.57
CSNK1E-213ENST00000495232 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
CSNK1E-213ENST00000495232 TMEM258P61165 79 aa5.17□□□□□ -1.58
CSNK1E-213ENST00000495232 MACF1Q9UPN3 7388 aaKnown RBP5.15□□□□□ -1.58
CSNK1E-213ENST00000495232 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
CSNK1E-213ENST00000495232 A0A1B0GU69 56 aa5.11□□□□□ -1.59
CSNK1E-213ENST00000495232 A0A1B0GU33 70 aa5.09□□□□□ -1.59
CSNK1E-213ENST00000495232 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
CSNK1E-213ENST00000495232 SYNE2Q8WXH0 6885 aaKnown RBP5.05□□□□□ -1.6
CSNK1E-213ENST00000495232 MT1XP80297 61 aa5.05□□□□□ -1.6
CSNK1E-213ENST00000495232 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
CSNK1E-213ENST00000495232 A0A0D9SG42 100 aa5.02□□□□□ -1.61
CSNK1E-213ENST00000495232 SPATA8Q6RVD6 105 aa5.02□□□□□ -1.61
CSNK1E-213ENST00000495232 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
CSNK1E-213ENST00000495232 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
CSNK1E-213ENST00000495232 SMIM26A0A096LP01 95 aa4.97□□□□□ -1.61
CSNK1E-213ENST00000495232 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
CSNK1E-213ENST00000495232 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
CSNK1E-213ENST00000495232 PCP4P48539 62 aa4.93□□□□□ -1.62
CSNK1E-213ENST00000495232 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
CSNK1E-213ENST00000495232 V9GYY9 64 aa4.89□□□□□ -1.63
CSNK1E-213ENST00000495232 A8MU10 97 aa4.87□□□□□ -1.63
CSNK1E-213ENST00000495232 UQCR11O14957 56 aa4.87□□□□□ -1.63
CSNK1E-213ENST00000495232 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
CSNK1E-213ENST00000495232 KMT2DO14686 5537 aa4.87□□□□□ -1.63
CSNK1E-213ENST00000495232 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
CSNK1E-213ENST00000495232 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
CSNK1E-213ENST00000495232 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
CSNK1E-213ENST00000495232 Q1T7F1 81 aa4.81□□□□□ -1.64
CSNK1E-213ENST00000495232 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
CSNK1E-213ENST00000495232 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
CSNK1E-213ENST00000495232 PSPHP1O15172 72 aa4.79□□□□□ -1.64
CSNK1E-213ENST00000495232 NEBP20929 6669 aa4.78□□□□□ -1.64
CSNK1E-213ENST00000495232 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
CSNK1E-213ENST00000495232 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
CSNK1E-213ENST00000495232 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
CSNK1E-213ENST00000495232 SPRR2FQ96RM1 72 aa4.76□□□□□ -1.65
CSNK1E-213ENST00000495232 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
CSNK1E-213ENST00000495232 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
CSNK1E-213ENST00000495232 K7ERS5 55 aa4.69□□□□□ -1.66
CSNK1E-213ENST00000495232 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
CSNK1E-213ENST00000495232 A6NED7 52 aa4.67□□□□□ -1.66
CSNK1E-213ENST00000495232 TNP1P09430 55 aa4.64□□□□□ -1.67
CSNK1E-213ENST00000495232 SPRR2EP22531 72 aa4.64□□□□□ -1.67
CSNK1E-213ENST00000495232 SPRR2BP35325 72 aa4.64□□□□□ -1.67
CSNK1E-213ENST00000495232 SPRR2AP35326 72 aa4.64□□□□□ -1.67
CSNK1E-213ENST00000495232 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
CSNK1E-213ENST00000495232 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
CSNK1E-213ENST00000495232 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
CSNK1E-213ENST00000495232 SPRR2DP22532 72 aa4.48□□□□□ -1.69
CSNK1E-213ENST00000495232 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
CSNK1E-213ENST00000495232 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
CSNK1E-213ENST00000495232 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
CSNK1E-213ENST00000495232 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
CSNK1E-213ENST00000495232 MT1EP04732 61 aa4.46□□□□□ -1.7
CSNK1E-213ENST00000495232 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
CSNK1E-213ENST00000495232 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
CSNK1E-213ENST00000495232 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms