RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 IGLV1-50A0A075B6I6 118 aa4.83□□□□□ -1.64
HDAC6-234ENST00000493923 IGFL1Q6UW32 110 aa4.83□□□□□ -1.64
HDAC6-234ENST00000493923 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
HDAC6-234ENST00000493923 A0A087WSZ3 146 aa4.81□□□□□ -1.64
HDAC6-234ENST00000493923 HRES1P13985 223 aa4.81□□□□□ -1.64
HDAC6-234ENST00000493923 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
HDAC6-234ENST00000493923 MMP24-AS1A0A0U1RRL7 71 aa4.79□□□□□ -1.64
HDAC6-234ENST00000493923 ACYP2P14621 99 aa4.79□□□□□ -1.64
HDAC6-234ENST00000493923 DEFB116Q30KQ4 102 aa4.78□□□□□ -1.64
HDAC6-234ENST00000493923 PCOTHQ58A44 107 aa4.78□□□□□ -1.64
HDAC6-234ENST00000493923 LINC00472Q9H8W2 130 aa4.78□□□□□ -1.64
HDAC6-234ENST00000493923 MUC2Q02817 5179 aa4.78□□□□□ -1.64
HDAC6-234ENST00000493923 ZNF861PO60384 105 aa4.77□□□□□ -1.65
HDAC6-234ENST00000493923 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
HDAC6-234ENST00000493923 ANAPC11Q9NYG5 84 aa4.77□□□□□ -1.65
HDAC6-234ENST00000493923 A0A1B0GU69 56 aa4.76□□□□□ -1.65
HDAC6-234ENST00000493923 UQCR11O14957 56 aa4.76□□□□□ -1.65
HDAC6-234ENST00000493923 SPRR1BP22528 89 aa4.76□□□□□ -1.65
HDAC6-234ENST00000493923 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
HDAC6-234ENST00000493923 KRTAP13-2Q52LG2 175 aa4.74□□□□□ -1.65
HDAC6-234ENST00000493923 KRTAP13-1Q8IUC0 172 aa4.74□□□□□ -1.65
HDAC6-234ENST00000493923 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
HDAC6-234ENST00000493923 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
HDAC6-234ENST00000493923 CSAG1Q6PB30 78 aa4.71□□□□□ -1.66
HDAC6-234ENST00000493923 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.66
HDAC6-234ENST00000493923 C8orf17Q9NRJ1 99 aa4.71□□□□□ -1.66
HDAC6-234ENST00000493923 ADM2Q7Z4H4 148 aa4.7□□□□□ -1.66
HDAC6-234ENST00000493923 MRPL34Q9BQ48 92 aaKnown RBP4.7□□□□□ -1.66
HDAC6-234ENST00000493923 PRLHP81277 87 aa4.69□□□□□ -1.66
HDAC6-234ENST00000493923 ZNF706Q9Y5V0 76 aaPredicted RBP4.69□□□□□ -1.66
HDAC6-234ENST00000493923 IGHV6-1A0A0B4J1U7 121 aa4.68□□□□□ -1.66
HDAC6-234ENST00000493923 TYMSOSQ8TAI1 123 aa4.68□□□□□ -1.66
HDAC6-234ENST00000493923 DMAC1Q96GE9 116 aa4.68□□□□□ -1.66
HDAC6-234ENST00000493923 A0A1B0GVX0 72 aa4.67□□□□□ -1.66
HDAC6-234ENST00000493923 ROMO1P60602 79 aa4.64□□□□□ -1.67
HDAC6-234ENST00000493923 LINC00304Q8N9R0 145 aa4.63□□□□□ -1.67
HDAC6-234ENST00000493923 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
HDAC6-234ENST00000493923 Q96NJ1 140 aa4.6□□□□□ -1.67
HDAC6-234ENST00000493923 A0A0G2JQZ4 141 aa4.59□□□□□ -1.67
HDAC6-234ENST00000493923 TPRXLQ17RH7 258 aa4.57□□□□□ -1.68
HDAC6-234ENST00000493923 KRTAP13-3Q3SY46 172 aa4.57□□□□□ -1.68
HDAC6-234ENST00000493923 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
HDAC6-234ENST00000493923 LINC00483Q53H64 154 aa4.53□□□□□ -1.68
HDAC6-234ENST00000493923 A8MUU9 505 aa4.52□□□□□ -1.69
HDAC6-234ENST00000493923 K7ERS5 55 aa4.52□□□□□ -1.69
HDAC6-234ENST00000493923 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
HDAC6-234ENST00000493923 IGLV9-49A0A0B4J1Y8 123 aa4.5□□□□□ -1.69
HDAC6-234ENST00000493923 Q5W150 140 aa4.49□□□□□ -1.69
HDAC6-234ENST00000493923 SPINK1P00995 79 aa4.47□□□□□ -1.69
HDAC6-234ENST00000493923 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.7
HDAC6-234ENST00000493923 SSBP3-AS1Q7Z2R9 100 aa4.45□□□□□ -1.7
HDAC6-234ENST00000493923 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
HDAC6-234ENST00000493923 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
HDAC6-234ENST00000493923 RPS29P62273 56 aaKnown RBP4.42□□□□□ -1.7
HDAC6-234ENST00000493923 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
HDAC6-234ENST00000493923 C9orf92A6NGG3 77 aa4.39□□□□□ -1.71
HDAC6-234ENST00000493923 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
HDAC6-234ENST00000493923 P0C880 135 aa4.39□□□□□ -1.71
HDAC6-234ENST00000493923 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
HDAC6-234ENST00000493923 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-234ENST00000493923 A0A1B0GU33 70 aa4.38□□□□□ -1.71
HDAC6-234ENST00000493923 KRTAP3-1Q9BYR8 98 aa4.37□□□□□ -1.71
HDAC6-234ENST00000493923 H0YAA0 97 aa4.36□□□□□ -1.71
HDAC6-234ENST00000493923 H1FX-AS1Q4G0G2 97 aa4.36□□□□□ -1.71
HDAC6-234ENST00000493923 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
HDAC6-234ENST00000493923 MT1HP80294 61 aa4.35□□□□□ -1.71
HDAC6-234ENST00000493923 C20orf166-AS1Q96NR2 134 aa4.35□□□□□ -1.71
HDAC6-234ENST00000493923 COX6B2Q6YFQ2 88 aa4.31□□□□□ -1.72
HDAC6-234ENST00000493923 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
HDAC6-234ENST00000493923 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
HDAC6-234ENST00000493923 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
HDAC6-234ENST00000493923 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
HDAC6-234ENST00000493923 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
HDAC6-234ENST00000493923 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
HDAC6-234ENST00000493923 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
HDAC6-234ENST00000493923 KRTAP9-8Q9BYQ0 159 aa4.24□□□□□ -1.73
HDAC6-234ENST00000493923 CRIPTQ9P021 101 aa4.22□□□□□ -1.73
HDAC6-234ENST00000493923 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
HDAC6-234ENST00000493923 M0R2T5 61 aa4.17□□□□□ -1.74
HDAC6-234ENST00000493923 USH2AO75445 5202 aa4.15□□□□□ -1.75
HDAC6-234ENST00000493923 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
HDAC6-234ENST00000493923 MT2AP02795 61 aa4.05□□□□□ -1.76
HDAC6-234ENST00000493923 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
HDAC6-234ENST00000493923 MT1FP04733 61 aa4.03□□□□□ -1.76
HDAC6-234ENST00000493923 S4R3F8 94 aa4.01□□□□□ -1.77
HDAC6-234ENST00000493923 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
HDAC6-234ENST00000493923 A0A0D9SG42 100 aa3.96□□□□□ -1.78
HDAC6-234ENST00000493923 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
HDAC6-234ENST00000493923 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
HDAC6-234ENST00000493923 PLAC4Q8WY50 150 aa3.93□□□□□ -1.78
HDAC6-234ENST00000493923 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
HDAC6-234ENST00000493923 M0QZ58 72 aa3.9□□□□□ -1.79
HDAC6-234ENST00000493923 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
HDAC6-234ENST00000493923 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
HDAC6-234ENST00000493923 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
HDAC6-234ENST00000493923 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.79
HDAC6-234ENST00000493923 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
HDAC6-234ENST00000493923 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
HDAC6-234ENST00000493923 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
HDAC6-234ENST00000493923 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms