RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 NDUFC1O43677 76 aa6.75□□□□□ -1.33
CDK9-204ENST00000491521 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
CDK9-204ENST00000491521 SSPOA2VEC9 5147 aa6.73□□□□□ -1.33
CDK9-204ENST00000491521 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
CDK9-204ENST00000491521 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
CDK9-204ENST00000491521 A8MUN3 132 aa6.69□□□□□ -1.34
CDK9-204ENST00000491521 MT2AP02795 61 aa6.69□□□□□ -1.34
CDK9-204ENST00000491521 H7BZZ5 65 aa6.68□□□□□ -1.34
CDK9-204ENST00000491521 PCP4P48539 62 aa6.68□□□□□ -1.34
CDK9-204ENST00000491521 SPANXA2-OT1Q8N9U9 137 aa6.68□□□□□ -1.34
CDK9-204ENST00000491521 MT1FP04733 61 aa6.65□□□□□ -1.34
CDK9-204ENST00000491521 DMAC1Q96GE9 116 aa6.65□□□□□ -1.34
CDK9-204ENST00000491521 ACYP2P14621 99 aa6.64□□□□□ -1.35
CDK9-204ENST00000491521 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
CDK9-204ENST00000491521 S4R3F8 94 aa6.63□□□□□ -1.35
CDK9-204ENST00000491521 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
CDK9-204ENST00000491521 LCA10Q71F78 164 aa6.58□□□□□ -1.36
CDK9-204ENST00000491521 LCE2BO14633 110 aa6.56□□□□□ -1.36
CDK9-204ENST00000491521 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
CDK9-204ENST00000491521 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
CDK9-204ENST00000491521 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
CDK9-204ENST00000491521 TMEM258P61165 79 aa6.54□□□□□ -1.36
CDK9-204ENST00000491521 ATP5EP56381 51 aaPredicted RBP6.53□□□□□ -1.36
CDK9-204ENST00000491521 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
CDK9-204ENST00000491521 COA5Q86WW8 74 aa6.5□□□□□ -1.37
CDK9-204ENST00000491521 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
CDK9-204ENST00000491521 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
CDK9-204ENST00000491521 SPTSSBQ8NFR3 76 aa6.48□□□□□ -1.37
CDK9-204ENST00000491521 SERP1Q9Y6X1 66 aa6.36□□□□□ -1.39
CDK9-204ENST00000491521 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
CDK9-204ENST00000491521 KRTAP19-6Q3LI70 58 aa6.3□□□□□ -1.4
CDK9-204ENST00000491521 MACF1Q9UPN3 7388 aaKnown RBP6.29□□□□□ -1.4
CDK9-204ENST00000491521 H0YAA0 97 aa6.29□□□□□ -1.4
CDK9-204ENST00000491521 SEC61GP60059 68 aa6.25□□□□□ -1.41
CDK9-204ENST00000491521 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
CDK9-204ENST00000491521 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
CDK9-204ENST00000491521 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
CDK9-204ENST00000491521 P0C880 135 aa6.2□□□□□ -1.42
CDK9-204ENST00000491521 A0A1B0GU69 56 aa6.19□□□□□ -1.42
CDK9-204ENST00000491521 SMIM26A0A096LP01 95 aa6.17□□□□□ -1.42
CDK9-204ENST00000491521 CRIPTQ9P021 101 aa6.15□□□□□ -1.42
CDK9-204ENST00000491521 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
CDK9-204ENST00000491521 PRR15LQ9BU68 103 aa6.14□□□□□ -1.43
CDK9-204ENST00000491521 R4GN34 69 aa6.12□□□□□ -1.43
CDK9-204ENST00000491521 V9GYY9 64 aa6.12□□□□□ -1.43
CDK9-204ENST00000491521 M0QZ58 72 aa6.09□□□□□ -1.43
CDK9-204ENST00000491521 Q5VV11 94 aa6.09□□□□□ -1.43
CDK9-204ENST00000491521 Q1T7F1 81 aa6.08□□□□□ -1.44
CDK9-204ENST00000491521 A0A1B0GU33 70 aa6.07□□□□□ -1.44
CDK9-204ENST00000491521 A6NN06 94 aa6.06□□□□□ -1.44
CDK9-204ENST00000491521 MT1BP07438 61 aa6.06□□□□□ -1.44
CDK9-204ENST00000491521 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
CDK9-204ENST00000491521 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
CDK9-204ENST00000491521 PSPHP1O15172 72 aa6.03□□□□□ -1.44
CDK9-204ENST00000491521 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
CDK9-204ENST00000491521 LINC01554Q52M75 96 aa6.01□□□□□ -1.45
CDK9-204ENST00000491521 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
CDK9-204ENST00000491521 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
CDK9-204ENST00000491521 MUC12Q9UKN1 5478 aa5.95□□□□□ -1.46
CDK9-204ENST00000491521 UQCR11O14957 56 aa5.94□□□□□ -1.46
CDK9-204ENST00000491521 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
CDK9-204ENST00000491521 A0A0D9SG42 100 aa5.91□□□□□ -1.46
CDK9-204ENST00000491521 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
CDK9-204ENST00000491521 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
CDK9-204ENST00000491521 NEBP20929 6669 aa5.88□□□□□ -1.47
CDK9-204ENST00000491521 A6NED7 52 aa5.86□□□□□ -1.47
CDK9-204ENST00000491521 A8MU10 97 aa5.85□□□□□ -1.47
CDK9-204ENST00000491521 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
CDK9-204ENST00000491521 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
CDK9-204ENST00000491521 MDN1Q9NU22 5596 aa5.81□□□□□ -1.48
CDK9-204ENST00000491521 KMT2DO14686 5537 aa5.79□□□□□ -1.48
CDK9-204ENST00000491521 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
CDK9-204ENST00000491521 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
CDK9-204ENST00000491521 CAMK2N1Q7Z7J9 78 aa5.72□□□□□ -1.49
CDK9-204ENST00000491521 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
CDK9-204ENST00000491521 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
CDK9-204ENST00000491521 K7ERS5 55 aa5.68□□□□□ -1.5
CDK9-204ENST00000491521 MT1XP80297 61 aa5.68□□□□□ -1.5
CDK9-204ENST00000491521 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
CDK9-204ENST00000491521 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
CDK9-204ENST00000491521 BRK1Q8WUW1 75 aa5.59□□□□□ -1.51
CDK9-204ENST00000491521 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
CDK9-204ENST00000491521 SPRR2EP22531 72 aa5.55□□□□□ -1.52
CDK9-204ENST00000491521 SPRR2BP35325 72 aa5.55□□□□□ -1.52
CDK9-204ENST00000491521 SPRR2AP35326 72 aa5.55□□□□□ -1.52
CDK9-204ENST00000491521 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
CDK9-204ENST00000491521 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
CDK9-204ENST00000491521 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
CDK9-204ENST00000491521 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
CDK9-204ENST00000491521 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
CDK9-204ENST00000491521 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
CDK9-204ENST00000491521 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
CDK9-204ENST00000491521 TNP1P09430 55 aa5.38□□□□□ -1.55
CDK9-204ENST00000491521 SPRR2DP22532 72 aa5.37□□□□□ -1.55
CDK9-204ENST00000491521 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
CDK9-204ENST00000491521 ROMO1P60602 79 aa5.36□□□□□ -1.55
CDK9-204ENST00000491521 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
CDK9-204ENST00000491521 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
CDK9-204ENST00000491521 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
CDK9-204ENST00000491521 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms