RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 LINC00208Q96KT6 92 aa7.77□□□□□ -1.17
TRA2A-208ENST00000490942 LCE1DQ5T752 114 aa7.76□□□□□ -1.17
TRA2A-208ENST00000490942 KRTAP4-7Q9BYR0 210 aa7.76□□□□□ -1.17
TRA2A-208ENST00000490942 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
TRA2A-208ENST00000490942 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
TRA2A-208ENST00000490942 A8MUN3 132 aa7.66□□□□□ -1.18
TRA2A-208ENST00000490942 KLKP1Q107X0 134 aa7.65□□□□□ -1.18
TRA2A-208ENST00000490942 SERP2Q8N6R1 65 aa7.63□□□□□ -1.19
TRA2A-208ENST00000490942 KRTAP9-8Q9BYQ0 159 aa7.63□□□□□ -1.19
TRA2A-208ENST00000490942 S4R3F8 94 aa7.61□□□□□ -1.19
TRA2A-208ENST00000490942 KRTAP4-9Q9BYQ8 210 aa7.56□□□□□ -1.2
TRA2A-208ENST00000490942 MT2AP02795 61 aa7.55□□□□□ -1.2
TRA2A-208ENST00000490942 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
TRA2A-208ENST00000490942 LCA10Q71F78 164 aa7.55□□□□□ -1.2
TRA2A-208ENST00000490942 DMAC1Q96GE9 116 aa7.52□□□□□ -1.21
TRA2A-208ENST00000490942 C20orf197Q8N268 126 aa7.49□□□□□ -1.21
TRA2A-208ENST00000490942 MT1FP04733 61 aa7.48□□□□□ -1.21
TRA2A-208ENST00000490942 COX7CP15954 63 aa7.48□□□□□ -1.21
TRA2A-208ENST00000490942 SNURFQ9Y675 71 aa7.48□□□□□ -1.21
TRA2A-208ENST00000490942 NDUFC1O43677 76 aa7.46□□□□□ -1.22
TRA2A-208ENST00000490942 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
TRA2A-208ENST00000490942 SPANXA2-OT1Q8N9U9 137 aa7.45□□□□□ -1.22
TRA2A-208ENST00000490942 KRTAP4-2Q9BYR5 136 aa7.43□□□□□ -1.22
TRA2A-208ENST00000490942 ACYP2P14621 99 aa7.4□□□□□ -1.22
TRA2A-208ENST00000490942 LCE4AQ5TA78 99 aa7.38□□□□□ -1.23
TRA2A-208ENST00000490942 ANAPC13Q9BS18 74 aa7.38□□□□□ -1.23
TRA2A-208ENST00000490942 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
TRA2A-208ENST00000490942 H0YAA0 97 aa7.36□□□□□ -1.23
TRA2A-208ENST00000490942 H7BZZ5 65 aa7.28□□□□□ -1.24
TRA2A-208ENST00000490942 SPTSSBQ8NFR3 76 aa7.28□□□□□ -1.24
TRA2A-208ENST00000490942 KRTAP4-11Q9BYQ6 195 aa7.27□□□□□ -1.25
TRA2A-208ENST00000490942 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
TRA2A-208ENST00000490942 CHKB-CPT1BH3BT56 60 aa7.24□□□□□ -1.25
TRA2A-208ENST00000490942 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
TRA2A-208ENST00000490942 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
TRA2A-208ENST00000490942 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
TRA2A-208ENST00000490942 CRCT1Q9UGL9 99 aa7.19□□□□□ -1.26
TRA2A-208ENST00000490942 CCDC179H3BU77 68 aa7.18□□□□□ -1.26
TRA2A-208ENST00000490942 ADM2Q7Z4H4 148 aa7.18□□□□□ -1.26
TRA2A-208ENST00000490942 KRTAP9-7A8MTY7 169 aa7.17□□□□□ -1.26
TRA2A-208ENST00000490942 USH2AO75445 5202 aa7.15□□□□□ -1.27
TRA2A-208ENST00000490942 COA5Q86WW8 74 aa7.14□□□□□ -1.27
TRA2A-208ENST00000490942 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
TRA2A-208ENST00000490942 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
TRA2A-208ENST00000490942 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
TRA2A-208ENST00000490942 P0C880 135 aa7.05□□□□□ -1.28
TRA2A-208ENST00000490942 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
TRA2A-208ENST00000490942 TMEM258P61165 79 aa7.03□□□□□ -1.28
TRA2A-208ENST00000490942 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
TRA2A-208ENST00000490942 Q5VV11 94 aa7.02□□□□□ -1.29
TRA2A-208ENST00000490942 R4GN34 69 aa7.01□□□□□ -1.29
TRA2A-208ENST00000490942 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
TRA2A-208ENST00000490942 MT1BP07438 61 aa6.98□□□□□ -1.29
TRA2A-208ENST00000490942 M0QZ58 72 aa6.94□□□□□ -1.3
TRA2A-208ENST00000490942 SEC61GP60059 68 aa6.93□□□□□ -1.3
TRA2A-208ENST00000490942 H3BS24 57 aa6.9□□□□□ -1.3
TRA2A-208ENST00000490942 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
TRA2A-208ENST00000490942 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
TRA2A-208ENST00000490942 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
TRA2A-208ENST00000490942 A0A1B0GU69 56 aa6.79□□□□□ -1.32
TRA2A-208ENST00000490942 A6NN06 94 aa6.78□□□□□ -1.32
TRA2A-208ENST00000490942 PCP4P48539 62 aa6.77□□□□□ -1.33
TRA2A-208ENST00000490942 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
TRA2A-208ENST00000490942 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
TRA2A-208ENST00000490942 A0A1B0GU33 70 aa6.75□□□□□ -1.33
TRA2A-208ENST00000490942 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
TRA2A-208ENST00000490942 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
TRA2A-208ENST00000490942 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
TRA2A-208ENST00000490942 KRTAP5-3Q6L8H2 238 aa6.71□□□□□ -1.34
TRA2A-208ENST00000490942 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
TRA2A-208ENST00000490942 MT1XP80297 61 aa6.63□□□□□ -1.35
TRA2A-208ENST00000490942 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
TRA2A-208ENST00000490942 V9GYY9 64 aa6.61□□□□□ -1.35
TRA2A-208ENST00000490942 MACF1Q9UPN3 7388 aaKnown RBP6.6□□□□□ -1.35
TRA2A-208ENST00000490942 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
TRA2A-208ENST00000490942 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
TRA2A-208ENST00000490942 Q1T7F1 81 aa6.55□□□□□ -1.36
TRA2A-208ENST00000490942 A0A0D9SG42 100 aa6.53□□□□□ -1.36
TRA2A-208ENST00000490942 UQCR11O14957 56 aa6.5□□□□□ -1.37
TRA2A-208ENST00000490942 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
TRA2A-208ENST00000490942 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
TRA2A-208ENST00000490942 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
TRA2A-208ENST00000490942 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
TRA2A-208ENST00000490942 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
TRA2A-208ENST00000490942 A8MU10 97 aa6.43□□□□□ -1.38
TRA2A-208ENST00000490942 KRTAP6-3Q3LI67 103 aa6.41□□□□□ -1.38
TRA2A-208ENST00000490942 PSPHP1O15172 72 aa6.39□□□□□ -1.39
TRA2A-208ENST00000490942 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
TRA2A-208ENST00000490942 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
TRA2A-208ENST00000490942 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
TRA2A-208ENST00000490942 KRTAP5-9P26371 169 aa6.28□□□□□ -1.4
TRA2A-208ENST00000490942 A6NED7 52 aa6.23□□□□□ -1.41
TRA2A-208ENST00000490942 K7ERS5 55 aa6.22□□□□□ -1.41
TRA2A-208ENST00000490942 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
TRA2A-208ENST00000490942 KMT2DO14686 5537 aa6.17□□□□□ -1.42
TRA2A-208ENST00000490942 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.42
TRA2A-208ENST00000490942 TNP1P09430 55 aa6.11□□□□□ -1.43
TRA2A-208ENST00000490942 NEBP20929 6669 aa6.1□□□□□ -1.43
TRA2A-208ENST00000490942 SPRR2FQ96RM1 72 aa6.1□□□□□ -1.43
TRA2A-208ENST00000490942 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms