RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
SCAMP4-208ENST00000489554 IGKV2D-30A0A075B6S6 120 aa5.4□□□□□ -1.54
SCAMP4-208ENST00000489554 HRES1P13985 223 aa5.4□□□□□ -1.54
SCAMP4-208ENST00000489554 A8MUN3 132 aa5.39□□□□□ -1.55
SCAMP4-208ENST00000489554 COA5Q86WW8 74 aa5.39□□□□□ -1.55
SCAMP4-208ENST00000489554 Q1T7F1 81 aa5.37□□□□□ -1.55
SCAMP4-208ENST00000489554 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
SCAMP4-208ENST00000489554 CHKB-CPT1BH3BT56 60 aa5.36□□□□□ -1.55
SCAMP4-208ENST00000489554 SPINK7P58062 85 aa5.35□□□□□ -1.55
SCAMP4-208ENST00000489554 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
SCAMP4-208ENST00000489554 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
SCAMP4-208ENST00000489554 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
SCAMP4-208ENST00000489554 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
SCAMP4-208ENST00000489554 RBM12B-AS1Q9P1G2 102 aa5.31□□□□□ -1.56
SCAMP4-208ENST00000489554 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
SCAMP4-208ENST00000489554 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
SCAMP4-208ENST00000489554 PRR15LQ9BU68 103 aa5.25□□□□□ -1.57
SCAMP4-208ENST00000489554 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
SCAMP4-208ENST00000489554 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
SCAMP4-208ENST00000489554 PSPHP1O15172 72 aa5.19□□□□□ -1.58
SCAMP4-208ENST00000489554 SEC61GP60059 68 aa5.18□□□□□ -1.58
SCAMP4-208ENST00000489554 A0A1B0GU69 56 aa5.16□□□□□ -1.58
SCAMP4-208ENST00000489554 MT2AP02795 61 aa5.16□□□□□ -1.58
SCAMP4-208ENST00000489554 Q5VV11 94 aa5.15□□□□□ -1.59
SCAMP4-208ENST00000489554 MT1FP04733 61 aa5.12□□□□□ -1.59
SCAMP4-208ENST00000489554 BRK1Q8WUW1 75 aa5.12□□□□□ -1.59
SCAMP4-208ENST00000489554 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
SCAMP4-208ENST00000489554 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
SCAMP4-208ENST00000489554 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
SCAMP4-208ENST00000489554 A6NED7 52 aa5.1□□□□□ -1.59
SCAMP4-208ENST00000489554 USH2AO75445 5202 aa5.08□□□□□ -1.6
SCAMP4-208ENST00000489554 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
SCAMP4-208ENST00000489554 UQCR11O14957 56 aa5.06□□□□□ -1.6
SCAMP4-208ENST00000489554 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
SCAMP4-208ENST00000489554 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
SCAMP4-208ENST00000489554 S4R3F8 94 aa5.05□□□□□ -1.6
SCAMP4-208ENST00000489554 LCE2BO14633 110 aa5.04□□□□□ -1.6
SCAMP4-208ENST00000489554 LCA10Q71F78 164 aa5.03□□□□□ -1.6
SCAMP4-208ENST00000489554 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
SCAMP4-208ENST00000489554 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
SCAMP4-208ENST00000489554 MIR22HGQ0VDD5 57 aa4.97□□□□□ -1.61
SCAMP4-208ENST00000489554 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
SCAMP4-208ENST00000489554 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
SCAMP4-208ENST00000489554 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
SCAMP4-208ENST00000489554 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
SCAMP4-208ENST00000489554 A0A1B0GU33 70 aa4.95□□□□□ -1.62
SCAMP4-208ENST00000489554 FCGBPQ9Y6R7 5405 aaPredicted RBP4.94□□□□□ -1.62
SCAMP4-208ENST00000489554 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
SCAMP4-208ENST00000489554 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
SCAMP4-208ENST00000489554 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
SCAMP4-208ENST00000489554 H0YAA0 97 aa4.88□□□□□ -1.63
SCAMP4-208ENST00000489554 K7ERS5 55 aa4.85□□□□□ -1.63
SCAMP4-208ENST00000489554 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.64
SCAMP4-208ENST00000489554 KRTAP3-2Q9BYR7 98 aa4.82□□□□□ -1.64
SCAMP4-208ENST00000489554 ADM2Q7Z4H4 148 aa4.81□□□□□ -1.64
SCAMP4-208ENST00000489554 M0QZ58 72 aa4.8□□□□□ -1.64
SCAMP4-208ENST00000489554 A8MU10 97 aa4.79□□□□□ -1.64
SCAMP4-208ENST00000489554 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
SCAMP4-208ENST00000489554 A6NN06 94 aa4.77□□□□□ -1.65
SCAMP4-208ENST00000489554 P0C880 135 aa4.77□□□□□ -1.65
SCAMP4-208ENST00000489554 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
SCAMP4-208ENST00000489554 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
SCAMP4-208ENST00000489554 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
SCAMP4-208ENST00000489554 MT1BP07438 61 aa4.7□□□□□ -1.66
SCAMP4-208ENST00000489554 CRIPTQ9P021 101 aa4.69□□□□□ -1.66
SCAMP4-208ENST00000489554 R4GN34 69 aa4.68□□□□□ -1.66
SCAMP4-208ENST00000489554 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
SCAMP4-208ENST00000489554 A0A0D9SG42 100 aa4.64□□□□□ -1.67
SCAMP4-208ENST00000489554 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
SCAMP4-208ENST00000489554 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
SCAMP4-208ENST00000489554 SPINT4Q6UDR6 99 aa4.57□□□□□ -1.68
SCAMP4-208ENST00000489554 ROMO1P60602 79 aa4.56□□□□□ -1.68
SCAMP4-208ENST00000489554 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
SCAMP4-208ENST00000489554 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
SCAMP4-208ENST00000489554 NEBP20929 6669 aa4.51□□□□□ -1.69
SCAMP4-208ENST00000489554 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
SCAMP4-208ENST00000489554 PRO2289Q9P1D8 64 aa4.47□□□□□ -1.69
SCAMP4-208ENST00000489554 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
SCAMP4-208ENST00000489554 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
SCAMP4-208ENST00000489554 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
SCAMP4-208ENST00000489554 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
SCAMP4-208ENST00000489554 MT1XP80297 61 aa4.41□□□□□ -1.7
SCAMP4-208ENST00000489554 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
SCAMP4-208ENST00000489554 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
SCAMP4-208ENST00000489554 KMT2DO14686 5537 aa4.36□□□□□ -1.71
SCAMP4-208ENST00000489554 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
SCAMP4-208ENST00000489554 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
SCAMP4-208ENST00000489554 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
SCAMP4-208ENST00000489554 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
SCAMP4-208ENST00000489554 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
SCAMP4-208ENST00000489554 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
SCAMP4-208ENST00000489554 TNP1P09430 55 aa4.25□□□□□ -1.73
SCAMP4-208ENST00000489554 SPRR2EP22531 72 aa4.24□□□□□ -1.73
SCAMP4-208ENST00000489554 SPRR2BP35325 72 aa4.24□□□□□ -1.73
SCAMP4-208ENST00000489554 SPRR2AP35326 72 aa4.24□□□□□ -1.73
SCAMP4-208ENST00000489554 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
SCAMP4-208ENST00000489554 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
SCAMP4-208ENST00000489554 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
SCAMP4-208ENST00000489554 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
SCAMP4-208ENST00000489554 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms