RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 C1orf64Q8NEQ6 169 aa4.32□□□□□ -1.72
CACUL1-204ENST00000489169 ANAPC11Q9NYG5 84 aa4.32□□□□□ -1.72
CACUL1-204ENST00000489169 RPS29P62273 56 aaKnown RBP4.31□□□□□ -1.72
CACUL1-204ENST00000489169 DEFB116Q30KQ4 102 aa4.31□□□□□ -1.72
CACUL1-204ENST00000489169 LIMD2Q9BT23 127 aa4.31□□□□□ -1.72
CACUL1-204ENST00000489169 FAT1Q14517 4588 aa4.31□□□□□ -1.72
CACUL1-204ENST00000489169 KRTAP13-2Q52LG2 175 aa4.3□□□□□ -1.72
CACUL1-204ENST00000489169 TYMSOSQ8TAI1 123 aa4.3□□□□□ -1.72
CACUL1-204ENST00000489169 A0A0G2JQZ4 141 aa4.29□□□□□ -1.72
CACUL1-204ENST00000489169 SPINK1P00995 79 aa4.29□□□□□ -1.72
CACUL1-204ENST00000489169 Q5VSD8 79 aa4.29□□□□□ -1.72
CACUL1-204ENST00000489169 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
CACUL1-204ENST00000489169 A0A1B0GVX0 72 aa4.28□□□□□ -1.72
CACUL1-204ENST00000489169 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
CACUL1-204ENST00000489169 C8orf87E5RJ46 101 aa4.27□□□□□ -1.73
CACUL1-204ENST00000489169 NDUFS5O43920 106 aa4.27□□□□□ -1.73
CACUL1-204ENST00000489169 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
CACUL1-204ENST00000489169 LINC00304Q8N9R0 145 aa4.26□□□□□ -1.73
CACUL1-204ENST00000489169 MRPL34Q9BQ48 92 aaKnown RBP4.26□□□□□ -1.73
CACUL1-204ENST00000489169 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
CACUL1-204ENST00000489169 LOC101927531A0A1B0GV80 90 aa4.25□□□□□ -1.73
CACUL1-204ENST00000489169 IGHV6-1A0A0B4J1U7 121 aa4.24□□□□□ -1.73
CACUL1-204ENST00000489169 Q96NJ1 140 aa4.24□□□□□ -1.73
CACUL1-204ENST00000489169 KRTAP10-8P60410 259 aa4.2□□□□□ -1.74
CACUL1-204ENST00000489169 COA5Q86WW8 74 aa4.2□□□□□ -1.74
CACUL1-204ENST00000489169 ACYP2P14621 99 aa4.19□□□□□ -1.74
CACUL1-204ENST00000489169 CHKB-CPT1BH3BT56 60 aa4.18□□□□□ -1.74
CACUL1-204ENST00000489169 PSPHP1O15172 72 aa4.18□□□□□ -1.74
CACUL1-204ENST00000489169 LINC00313P59037 77 aa4.18□□□□□ -1.74
CACUL1-204ENST00000489169 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
CACUL1-204ENST00000489169 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
CACUL1-204ENST00000489169 PRR15LQ9BU68 103 aa4.17□□□□□ -1.74
CACUL1-204ENST00000489169 A8MUN3 132 aa4.15□□□□□ -1.75
CACUL1-204ENST00000489169 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
CACUL1-204ENST00000489169 LINC01558Q9Y6Z2 57 aa4.15□□□□□ -1.75
CACUL1-204ENST00000489169 A6NED7 52 aa4.14□□□□□ -1.75
CACUL1-204ENST00000489169 FAT3Q8TDW7 4589 aa4.14□□□□□ -1.75
CACUL1-204ENST00000489169 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
CACUL1-204ENST00000489169 TNXBP22105 4242 aa4.13□□□□□ -1.75
CACUL1-204ENST00000489169 LRP2P98164 4655 aa4.12□□□□□ -1.75
CACUL1-204ENST00000489169 MT1HL1P0DM35 61 aa4.12□□□□□ -1.75
CACUL1-204ENST00000489169 Q5VV11 94 aa4.12□□□□□ -1.75
CACUL1-204ENST00000489169 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
CACUL1-204ENST00000489169 LRP1Q07954 4544 aaKnown RBP4.11□□□□□ -1.75
CACUL1-204ENST00000489169 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
CACUL1-204ENST00000489169 HRES1P13985 223 aa4.09□□□□□ -1.75
CACUL1-204ENST00000489169 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
CACUL1-204ENST00000489169 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
CACUL1-204ENST00000489169 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
CACUL1-204ENST00000489169 KRTAP13-3Q3SY46 172 aa4.05□□□□□ -1.76
CACUL1-204ENST00000489169 Q5W150 140 aa4.05□□□□□ -1.76
CACUL1-204ENST00000489169 A0A1B0GU69 56 aa4.04□□□□□ -1.76
CACUL1-204ENST00000489169 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
CACUL1-204ENST00000489169 A8MUU9 505 aa4.03□□□□□ -1.76
CACUL1-204ENST00000489169 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
CACUL1-204ENST00000489169 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
CACUL1-204ENST00000489169 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
CACUL1-204ENST00000489169 TPRXLQ17RH7 258 aa4.01□□□□□ -1.77
CACUL1-204ENST00000489169 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
CACUL1-204ENST00000489169 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
CACUL1-204ENST00000489169 UQCR11O14957 56 aa4□□□□□ -1.77
CACUL1-204ENST00000489169 C9orf92A6NGG3 77 aa3.99□□□□□ -1.77
CACUL1-204ENST00000489169 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
CACUL1-204ENST00000489169 LCA10Q71F78 164 aa3.98□□□□□ -1.77
CACUL1-204ENST00000489169 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
CACUL1-204ENST00000489169 RPL37P61927 97 aaKnown RBP3.96□□□□□ -1.78
CACUL1-204ENST00000489169 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
CACUL1-204ENST00000489169 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
CACUL1-204ENST00000489169 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
CACUL1-204ENST00000489169 A6NN06 94 aa3.93□□□□□ -1.78
CACUL1-204ENST00000489169 SPINK7P58062 85 aa3.93□□□□□ -1.78
CACUL1-204ENST00000489169 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
CACUL1-204ENST00000489169 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
CACUL1-204ENST00000489169 K7ERS5 55 aa3.87□□□□□ -1.79
CACUL1-204ENST00000489169 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
CACUL1-204ENST00000489169 A8MU10 97 aa3.85□□□□□ -1.79
CACUL1-204ENST00000489169 RBM12B-AS1Q9P1G2 102 aa3.83□□□□□ -1.8
CACUL1-204ENST00000489169 A0A1B0GU33 70 aa3.8□□□□□ -1.8
CACUL1-204ENST00000489169 COX6B2Q6YFQ2 88 aa3.8□□□□□ -1.8
CACUL1-204ENST00000489169 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
CACUL1-204ENST00000489169 MUC17Q685J3 4493 aa3.76□□□□□ -1.81
CACUL1-204ENST00000489169 LPAP08519 4548 aa3.75□□□□□ -1.81
CACUL1-204ENST00000489169 H1FX-AS1Q4G0G2 97 aa3.75□□□□□ -1.81
CACUL1-204ENST00000489169 NEBP20929 6669 aa3.74□□□□□ -1.81
CACUL1-204ENST00000489169 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
CACUL1-204ENST00000489169 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
CACUL1-204ENST00000489169 S4R3F8 94 aa3.68□□□□□ -1.82
CACUL1-204ENST00000489169 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
CACUL1-204ENST00000489169 H0YAA0 97 aa3.67□□□□□ -1.82
CACUL1-204ENST00000489169 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
CACUL1-204ENST00000489169 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
CACUL1-204ENST00000489169 CSAG1Q6PB30 78 aa3.65□□□□□ -1.83
CACUL1-204ENST00000489169 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
CACUL1-204ENST00000489169 USH2AO75445 5202 aa3.64□□□□□ -1.83
CACUL1-204ENST00000489169 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
CACUL1-204ENST00000489169 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
CACUL1-204ENST00000489169 ROMO1P60602 79 aa3.61□□□□□ -1.83
CACUL1-204ENST00000489169 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
CACUL1-204ENST00000489169 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
CACUL1-204ENST00000489169 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms