RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
RPL13A-212ENST00000488946 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
RPL13A-212ENST00000488946 A8MUU9 505 aa7.83□□□□□ -1.16
RPL13A-212ENST00000488946 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
RPL13A-212ENST00000488946 IGKV2D-30A0A075B6S6 120 aa7.77□□□□□ -1.17
RPL13A-212ENST00000488946 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
RPL13A-212ENST00000488946 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
RPL13A-212ENST00000488946 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
RPL13A-212ENST00000488946 TNXBP22105 4242 aa7.71□□□□□ -1.17
RPL13A-212ENST00000488946 DMBT1Q9UGM3 2413 aaPredicted RBP7.69□□□□□ -1.18
RPL13A-212ENST00000488946 FAT3Q8TDW7 4589 aa7.69□□□□□ -1.18
RPL13A-212ENST00000488946 H0YAA0 97 aa7.68□□□□□ -1.18
RPL13A-212ENST00000488946 J3QL48 77 aa7.68□□□□□ -1.18
RPL13A-212ENST00000488946 LRP1Q07954 4544 aaKnown RBP7.68□□□□□ -1.18
RPL13A-212ENST00000488946 C9orf92A6NGG3 77 aa7.68□□□□□ -1.18
RPL13A-212ENST00000488946 CRIPTQ9P021 101 aa7.61□□□□□ -1.19
RPL13A-212ENST00000488946 MT1HL1P0DM35 61 aa7.6□□□□□ -1.19
RPL13A-212ENST00000488946 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
RPL13A-212ENST00000488946 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
RPL13A-212ENST00000488946 HERC1Q15751 4861 aa7.49□□□□□ -1.21
RPL13A-212ENST00000488946 KRTAP15-1Q3LI76 137 aa7.48□□□□□ -1.21
RPL13A-212ENST00000488946 A0A1B0GU33 70 aa7.47□□□□□ -1.21
RPL13A-212ENST00000488946 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.22
RPL13A-212ENST00000488946 XP32Q5T750 250 aa7.44□□□□□ -1.22
RPL13A-212ENST00000488946 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
RPL13A-212ENST00000488946 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
RPL13A-212ENST00000488946 K7ERS5 55 aa7.42□□□□□ -1.22
RPL13A-212ENST00000488946 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
RPL13A-212ENST00000488946 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
RPL13A-212ENST00000488946 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
RPL13A-212ENST00000488946 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
RPL13A-212ENST00000488946 C10orf95Q9H7T3 257 aa7.23□□□□□ -1.25
RPL13A-212ENST00000488946 LUZP6Q538Z0 58 aa7.21□□□□□ -1.26
RPL13A-212ENST00000488946 LRP2P98164 4655 aa7.17□□□□□ -1.26
RPL13A-212ENST00000488946 KRTAP3-3Q9BYR6 98 aa7.12□□□□□ -1.27
RPL13A-212ENST00000488946 LPAP08519 4548 aa7.12□□□□□ -1.27
RPL13A-212ENST00000488946 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
RPL13A-212ENST00000488946 S4R3F8 94 aa7.09□□□□□ -1.27
RPL13A-212ENST00000488946 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
RPL13A-212ENST00000488946 KRTAP3-2Q9BYR7 98 aa7.04□□□□□ -1.28
RPL13A-212ENST00000488946 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
RPL13A-212ENST00000488946 A0A0D9SG42 100 aa7.02□□□□□ -1.29
RPL13A-212ENST00000488946 MUC17Q685J3 4493 aa6.96□□□□□ -1.3
RPL13A-212ENST00000488946 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
RPL13A-212ENST00000488946 RNF213Q63HN8 5207 aa6.9□□□□□ -1.3
RPL13A-212ENST00000488946 KRTAP12-2P59991 146 aa6.87□□□□□ -1.31
RPL13A-212ENST00000488946 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
RPL13A-212ENST00000488946 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
RPL13A-212ENST00000488946 MUC2Q02817 5179 aa6.76□□□□□ -1.33
RPL13A-212ENST00000488946 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
RPL13A-212ENST00000488946 M0QZ58 72 aa6.7□□□□□ -1.34
RPL13A-212ENST00000488946 FAT4Q6V0I7 4981 aa6.61□□□□□ -1.35
RPL13A-212ENST00000488946 FLGP20930 4061 aaPredicted RBP6.58□□□□□ -1.36
RPL13A-212ENST00000488946 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
RPL13A-212ENST00000488946 R4GN34 69 aa6.53□□□□□ -1.36
RPL13A-212ENST00000488946 LCE2AQ5TA79 106 aaPredicted RBP6.52□□□□□ -1.37
RPL13A-212ENST00000488946 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
RPL13A-212ENST00000488946 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
RPL13A-212ENST00000488946 MT1HP80294 61 aa6.43□□□□□ -1.38
RPL13A-212ENST00000488946 M0R2T5 61 aa6.38□□□□□ -1.39
RPL13A-212ENST00000488946 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
RPL13A-212ENST00000488946 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
RPL13A-212ENST00000488946 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
RPL13A-212ENST00000488946 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
RPL13A-212ENST00000488946 MT2AP02795 61 aa6.17□□□□□ -1.42
RPL13A-212ENST00000488946 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
RPL13A-212ENST00000488946 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
RPL13A-212ENST00000488946 MT1FP04733 61 aa6.15□□□□□ -1.43
RPL13A-212ENST00000488946 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
RPL13A-212ENST00000488946 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
RPL13A-212ENST00000488946 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
RPL13A-212ENST00000488946 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
RPL13A-212ENST00000488946 INE1O15225 51 aa6.04□□□□□ -1.44
RPL13A-212ENST00000488946 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
RPL13A-212ENST00000488946 TNP1P09430 55 aa5.99□□□□□ -1.45
RPL13A-212ENST00000488946 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
RPL13A-212ENST00000488946 MT1BP07438 61 aa5.9□□□□□ -1.47
RPL13A-212ENST00000488946 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
RPL13A-212ENST00000488946 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
RPL13A-212ENST00000488946 LCE2BO14633 110 aa5.83□□□□□ -1.48
RPL13A-212ENST00000488946 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
RPL13A-212ENST00000488946 USH2AO75445 5202 aa5.8□□□□□ -1.48
RPL13A-212ENST00000488946 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
RPL13A-212ENST00000488946 MT1XP80297 61 aa5.77□□□□□ -1.49
RPL13A-212ENST00000488946 SSPOA2VEC9 5147 aa5.69□□□□□ -1.5
RPL13A-212ENST00000488946 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
RPL13A-212ENST00000488946 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
RPL13A-212ENST00000488946 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
RPL13A-212ENST00000488946 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
RPL13A-212ENST00000488946 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
RPL13A-212ENST00000488946 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
RPL13A-212ENST00000488946 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
RPL13A-212ENST00000488946 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
RPL13A-212ENST00000488946 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
RPL13A-212ENST00000488946 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
RPL13A-212ENST00000488946 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
RPL13A-212ENST00000488946 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
RPL13A-212ENST00000488946 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
RPL13A-212ENST00000488946 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
RPL13A-212ENST00000488946 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms