RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 STAB1Q9NY15 2570 aa1.52□□□□□ -2.17
CTNNB1-215ENST00000488914 DEFB135Q30KP9 77 aa1.52□□□□□ -2.17
CTNNB1-215ENST00000488914 FLNAP21333 2647 aaKnown RBP1.52□□□□□ -2.17
CTNNB1-215ENST00000488914 KMT2CQ8NEZ4 4911 aaKnown RBP1.51□□□□□ -2.17
CTNNB1-215ENST00000488914 PKD1L1Q8TDX9 2849 aa1.51□□□□□ -2.17
CTNNB1-215ENST00000488914 HIVEP1P15822 2718 aa1.51□□□□□ -2.17
CTNNB1-215ENST00000488914 CCDC168Q8NDH2 2452 aa1.51□□□□□ -2.17
CTNNB1-215ENST00000488914 AKAP9Q99996 3911 aa1.51□□□□□ -2.17
CTNNB1-215ENST00000488914 MTORP42345 2549 aa1.5□□□□□ -2.17
CTNNB1-215ENST00000488914 DEFB1P60022 68 aa1.5□□□□□ -2.17
CTNNB1-215ENST00000488914 OTOGQ6ZRI0 2925 aa1.5□□□□□ -2.17
CTNNB1-215ENST00000488914 ADGRG4Q8IZF6 3080 aa1.5□□□□□ -2.17
CTNNB1-215ENST00000488914 COL6A5A8TX70 2615 aa1.5□□□□□ -2.17
CTNNB1-215ENST00000488914 ANKHD1Q8IWZ3 2542 aaKnown RBP1.49□□□□□ -2.17
CTNNB1-215ENST00000488914 APC2O95996 2303 aa1.49□□□□□ -2.17
CTNNB1-215ENST00000488914 ACACAQ13085 2346 aa1.49□□□□□ -2.17
CTNNB1-215ENST00000488914 USP9YO00507 2555 aaPredicted RBP1.49□□□□□ -2.17
CTNNB1-215ENST00000488914 LRBAP50851 2863 aa1.49□□□□□ -2.17
CTNNB1-215ENST00000488914 UTP20O75691 2785 aaKnown RBP1.48□□□□□ -2.17
CTNNB1-215ENST00000488914 H3BNG1 76 aa1.48□□□□□ -2.17
CTNNB1-215ENST00000488914 HTN1P15515 57 aa1.48□□□□□ -2.17
CTNNB1-215ENST00000488914 CRYBG3Q68DQ2 2970 aa1.48□□□□□ -2.17
CTNNB1-215ENST00000488914 NIPBLQ6KC79 2804 aaeCLIP1.48□□□□□ -2.17
CTNNB1-215ENST00000488914 MGAQ8IWI9 3026 aa1.48□□□□□ -2.17
CTNNB1-215ENST00000488914 TNP1P09430 55 aa1.47□□□□□ -2.17
CTNNB1-215ENST00000488914 RYR2Q92736 4967 aa1.47□□□□□ -2.17
CTNNB1-215ENST00000488914 SRRM2Q9UQ35 2752 aaKnown RBP1.46□□□□□ -2.18
CTNNB1-215ENST00000488914 M0R2T5 61 aa1.46□□□□□ -2.18
CTNNB1-215ENST00000488914 DEFB124Q8NES8 71 aa1.46□□□□□ -2.18
CTNNB1-215ENST00000488914 ATMQ13315 3056 aa1.46□□□□□ -2.18
CTNNB1-215ENST00000488914 CSMD2Q7Z408 3487 aa1.46□□□□□ -2.18
CTNNB1-215ENST00000488914 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
CTNNB1-215ENST00000488914 TENM2Q9NT68 2774 aa1.45□□□□□ -2.18
CTNNB1-215ENST00000488914 NBASA2RRP1 2371 aa1.45□□□□□ -2.18
CTNNB1-215ENST00000488914 TLN2Q9Y4G6 2542 aa1.45□□□□□ -2.18
CTNNB1-215ENST00000488914 HERC2O95714 4834 aa1.45□□□□□ -2.18
CTNNB1-215ENST00000488914 APCP25054 2843 aa1.44□□□□□ -2.18
CTNNB1-215ENST00000488914 CUBNO60494 3623 aa1.44□□□□□ -2.18
CTNNB1-215ENST00000488914 VWFP04275 2813 aa1.44□□□□□ -2.18
CTNNB1-215ENST00000488914 TGP01266 2768 aa1.44□□□□□ -2.18
CTNNB1-215ENST00000488914 C9orf92A6NGG3 77 aa1.43□□□□□ -2.18
CTNNB1-215ENST00000488914 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
CTNNB1-215ENST00000488914 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
CTNNB1-215ENST00000488914 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
CTNNB1-215ENST00000488914 BSNQ9UPA5 3926 aa1.43□□□□□ -2.18
CTNNB1-215ENST00000488914 ACANP16112 2415 aa1.42□□□□□ -2.18
CTNNB1-215ENST00000488914 LAMA1P25391 3075 aa1.42□□□□□ -2.18
CTNNB1-215ENST00000488914 SPART-AS1P0CW21 52 aa1.42□□□□□ -2.18
CTNNB1-215ENST00000488914 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
CTNNB1-215ENST00000488914 ZNF469Q96JG9 3925 aaPredicted RBP1.42□□□□□ -2.18
CTNNB1-215ENST00000488914 CENPEQ02224 2701 aa1.41□□□□□ -2.18
CTNNB1-215ENST00000488914 SPINK6Q6UWN8 80 aa1.4□□□□□ -2.19
CTNNB1-215ENST00000488914 SMR3AQ99954 134 aa1.4□□□□□ -2.19
CTNNB1-215ENST00000488914 VPS13CQ709C8 3753 aa1.39□□□□□ -2.19
CTNNB1-215ENST00000488914 A0A096LPF7 62 aa1.39□□□□□ -2.19
CTNNB1-215ENST00000488914 VPS13DQ5THJ4 4388 aa1.39□□□□□ -2.19
CTNNB1-215ENST00000488914 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
CTNNB1-215ENST00000488914 A0A096LNI7 61 aa1.38□□□□□ -2.19
CTNNB1-215ENST00000488914 DEFB136Q30KP8 78 aa1.38□□□□□ -2.19
CTNNB1-215ENST00000488914 CSMD3Q7Z407 3707 aa1.38□□□□□ -2.19
CTNNB1-215ENST00000488914 DCHS2Q6V1P9 2916 aa1.37□□□□□ -2.19
CTNNB1-215ENST00000488914 DNAH11Q96DT5 4516 aa1.37□□□□□ -2.19
CTNNB1-215ENST00000488914 MGAM2Q2M2H8 2515 aa1.37□□□□□ -2.19
CTNNB1-215ENST00000488914 PRKDCP78527 4128 aaKnown RBP1.36□□□□□ -2.19
CTNNB1-215ENST00000488914 MYCBP2O75592 4640 aa1.36□□□□□ -2.19
CTNNB1-215ENST00000488914 ANK2Q01484 3957 aa1.35□□□□□ -2.19
CTNNB1-215ENST00000488914 DNAH1Q9P2D7 4330 aa1.35□□□□□ -2.19
CTNNB1-215ENST00000488914 TENM1Q9UKZ4 2725 aa1.35□□□□□ -2.19
CTNNB1-215ENST00000488914 TACC2O95359 2948 aa1.35□□□□□ -2.19
CTNNB1-215ENST00000488914 ZANQ9Y493 2812 aa1.35□□□□□ -2.19
CTNNB1-215ENST00000488914 HERC1Q15751 4861 aa1.34□□□□□ -2.19
CTNNB1-215ENST00000488914 SVEP1Q4LDE5 3571 aa1.34□□□□□ -2.19
CTNNB1-215ENST00000488914 ABCA13Q86UQ4 5058 aa1.34□□□□□ -2.2
CTNNB1-215ENST00000488914 MAP1AP78559 2803 aaPredicted RBP1.33□□□□□ -2.2
CTNNB1-215ENST00000488914 MXRA5Q9NR99 2828 aa1.33□□□□□ -2.2
CTNNB1-215ENST00000488914 ANK3Q12955 4377 aaKnown RBP1.33□□□□□ -2.2
CTNNB1-215ENST00000488914 TRRAPQ9Y4A5 3859 aa1.33□□□□□ -2.2
CTNNB1-215ENST00000488914 SACSQ9NZJ4 4579 aa1.32□□□□□ -2.2
CTNNB1-215ENST00000488914 NSD1Q96L73 2696 aaPredicted RBP1.31□□□□□ -2.2
CTNNB1-215ENST00000488914 MUC2Q02817 5179 aa1.31□□□□□ -2.2
CTNNB1-215ENST00000488914 DYNC2H1Q8NCM8 4307 aaKnown RBP1.3□□□□□ -2.2
CTNNB1-215ENST00000488914 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
CTNNB1-215ENST00000488914 SONP18583 2426 aaKnown RBP1.3□□□□□ -2.2
CTNNB1-215ENST00000488914 TENM3Q9P273 2699 aa1.3□□□□□ -2.2
CTNNB1-215ENST00000488914 CMYA5Q8N3K9 4069 aa1.27□□□□□ -2.21
CTNNB1-215ENST00000488914 DNAH8Q96JB1 4490 aa1.27□□□□□ -2.21
CTNNB1-215ENST00000488914 PRM1P04553 51 aa1.25□□□□□ -2.21
CTNNB1-215ENST00000488914 HTN3P15516 51 aa1.25□□□□□ -2.21
CTNNB1-215ENST00000488914 KRTAP8-1Q8IUC2 63 aa1.25□□□□□ -2.21
CTNNB1-215ENST00000488914 DEFB4AO15263 64 aa1.24□□□□□ -2.21
CTNNB1-215ENST00000488914 HECTD4Q9Y4D8 3996 aa1.24□□□□□ -2.21
CTNNB1-215ENST00000488914 TNXBP22105 4242 aa1.23□□□□□ -2.21
CTNNB1-215ENST00000488914 DNAH17Q9UFH2 4485 aa1.23□□□□□ -2.21
CTNNB1-215ENST00000488914 LYSTQ99698 3801 aa1.23□□□□□ -2.21
CTNNB1-215ENST00000488914 FSIP2Q5CZC0 6907 aa1.23□□□□□ -2.21
CTNNB1-215ENST00000488914 DNAH2Q9P225 4427 aa1.22□□□□□ -2.21
CTNNB1-215ENST00000488914 RNF213Q63HN8 5207 aa1.22□□□□□ -2.21
CTNNB1-215ENST00000488914 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
CTNNB1-215ENST00000488914 COL7A1Q02388 2944 aa1.22□□□□□ -2.21
CTNNB1-215ENST00000488914 KMT2AQ03164 3969 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms