RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 RPS29P62273 56 aaKnown RBP10.06□□□□□ -0.8
COL16A1-215ENST00000488897 RBM12B-AS1Q9P1G2 102 aa10.06□□□□□ -0.8
COL16A1-215ENST00000488897 SPATA8Q6RVD6 105 aa10.04□□□□□ -0.8
COL16A1-215ENST00000488897 HMCN2Q8NDA2 5059 aa10.03□□□□□ -0.8
COL16A1-215ENST00000488897 LRP2P98164 4655 aa10.01□□□□□ -0.81
COL16A1-215ENST00000488897 UQCR11O14957 56 aa10.01□□□□□ -0.81
COL16A1-215ENST00000488897 MIR22HGQ0VDD5 57 aa9.97□□□□□ -0.81
COL16A1-215ENST00000488897 UBR4Q5T4S7 5183 aa9.9□□□□□ -0.82
COL16A1-215ENST00000488897 A8MUU9 505 aa9.85□□□□□ -0.83
COL16A1-215ENST00000488897 C20orf166-AS1Q96NR2 134 aa9.85□□□□□ -0.83
COL16A1-215ENST00000488897 H3BS24 57 aa9.84□□□□□ -0.83
COL16A1-215ENST00000488897 C9orf92A6NGG3 77 aa9.84□□□□□ -0.83
COL16A1-215ENST00000488897 MUC2Q02817 5179 aa9.79□□□□□ -0.84
COL16A1-215ENST00000488897 RNF213Q63HN8 5207 aa9.78□□□□□ -0.84
COL16A1-215ENST00000488897 PRAC1Q96KF2 57 aa9.74□□□□□ -0.85
COL16A1-215ENST00000488897 ADM2Q7Z4H4 148 aa9.7□□□□□ -0.86
COL16A1-215ENST00000488897 KRTAP3-1Q9BYR8 98 aa9.7□□□□□ -0.86
COL16A1-215ENST00000488897 TPRXLQ17RH7 258 aa9.61□□□□□ -0.87
COL16A1-215ENST00000488897 XP32Q5T750 250 aa9.6□□□□□ -0.87
COL16A1-215ENST00000488897 A0A1B0GU33 70 aa9.6□□□□□ -0.87
COL16A1-215ENST00000488897 H0YAA0 97 aa9.6□□□□□ -0.87
COL16A1-215ENST00000488897 COX6B2Q6YFQ2 88 aa9.57□□□□□ -0.88
COL16A1-215ENST00000488897 H1FX-AS1Q4G0G2 97 aa9.55□□□□□ -0.88
COL16A1-215ENST00000488897 LINC01554Q52M75 96 aa9.51□□□□□ -0.89
COL16A1-215ENST00000488897 CSAG1Q6PB30 78 aa9.48□□□□□ -0.89
COL16A1-215ENST00000488897 KRTAP4-1Q9BYQ7 146 aa9.42□□□□□ -0.9
COL16A1-215ENST00000488897 RPL37P61927 97 aaKnown RBP9.39□□□□□ -0.91
COL16A1-215ENST00000488897 MUC17Q685J3 4493 aa9.36□□□□□ -0.91
COL16A1-215ENST00000488897 K7ERS5 55 aa9.35□□□□□ -0.91
COL16A1-215ENST00000488897 FAT4Q6V0I7 4981 aa9.34□□□□□ -0.91
COL16A1-215ENST00000488897 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
COL16A1-215ENST00000488897 SEC61BP60468 96 aaKnown RBP9.27□□□□□ -0.92
COL16A1-215ENST00000488897 KRTAP25-1Q3LHN0 102 aa9.26□□□□□ -0.93
COL16A1-215ENST00000488897 KRTAP10-6P60371 365 aaPredicted RBP9.24□□□□□ -0.93
COL16A1-215ENST00000488897 S4R3F8 94 aa9.23□□□□□ -0.93
COL16A1-215ENST00000488897 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
COL16A1-215ENST00000488897 KRTAP13-4Q3LI77 160 aa9.12□□□□□ -0.95
COL16A1-215ENST00000488897 ROMO1P60602 79 aa9.11□□□□□ -0.95
COL16A1-215ENST00000488897 A0A0D9SG42 100 aa9.07□□□□□ -0.96
COL16A1-215ENST00000488897 P0C880 135 aa9.03□□□□□ -0.96
COL16A1-215ENST00000488897 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
COL16A1-215ENST00000488897 KRTAP19-2Q3LHN2 52 aa9.01□□□□□ -0.97
COL16A1-215ENST00000488897 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
COL16A1-215ENST00000488897 FLGP20930 4061 aaPredicted RBP8.87□□□□□ -0.99
COL16A1-215ENST00000488897 KRTAP12-2P59991 146 aa8.85□□□□□ -0.99
COL16A1-215ENST00000488897 M0QZ58 72 aa8.83□□□□□ -1
COL16A1-215ENST00000488897 KRTAP12-1P59990 96 aa8.8□□□□□ -1
COL16A1-215ENST00000488897 MT1HP80294 61 aa8.79□□□□□ -1
COL16A1-215ENST00000488897 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
COL16A1-215ENST00000488897 LCE2AQ5TA79 106 aaPredicted RBP8.72□□□□□ -1.01
COL16A1-215ENST00000488897 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.02
COL16A1-215ENST00000488897 M0R2T5 61 aa8.7□□□□□ -1.02
COL16A1-215ENST00000488897 A0A0A0MQY5 61 aa8.66□□□□□ -1.02
COL16A1-215ENST00000488897 R4GN34 69 aa8.56□□□□□ -1.04
COL16A1-215ENST00000488897 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.05
COL16A1-215ENST00000488897 KRTAP15-1Q3LI76 137 aa8.44□□□□□ -1.06
COL16A1-215ENST00000488897 KRTAP9-8Q9BYQ0 159 aa8.41□□□□□ -1.06
COL16A1-215ENST00000488897 FSIP2Q5CZC0 6907 aa8.4□□□□□ -1.06
COL16A1-215ENST00000488897 MT2AP02795 61 aa8.33□□□□□ -1.08
COL16A1-215ENST00000488897 MT1FP04733 61 aa8.32□□□□□ -1.08
COL16A1-215ENST00000488897 NDUFAF8A1L188 74 aa8.27□□□□□ -1.09
COL16A1-215ENST00000488897 KRTAP10-10P60014 251 aa8.27□□□□□ -1.09
COL16A1-215ENST00000488897 USH2AO75445 5202 aa8.24□□□□□ -1.09
COL16A1-215ENST00000488897 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
COL16A1-215ENST00000488897 PP632Q6XCG6 107 aa8.1□□□□□ -1.11
COL16A1-215ENST00000488897 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
COL16A1-215ENST00000488897 KRTAP9-2Q9BYQ4 174 aa8.09□□□□□ -1.11
COL16A1-215ENST00000488897 PLAC4Q8WY50 150 aa8.08□□□□□ -1.12
COL16A1-215ENST00000488897 LCE2BO14633 110 aa8.03□□□□□ -1.12
COL16A1-215ENST00000488897 KRTAP19-1Q8IUB9 90 aa7.97□□□□□ -1.13
COL16A1-215ENST00000488897 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
COL16A1-215ENST00000488897 SSPOA2VEC9 5147 aa7.94□□□□□ -1.14
COL16A1-215ENST00000488897 LUZP6Q538Z0 58 aa7.88□□□□□ -1.15
COL16A1-215ENST00000488897 TNP1P09430 55 aa7.87□□□□□ -1.15
COL16A1-215ENST00000488897 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.15
COL16A1-215ENST00000488897 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
COL16A1-215ENST00000488897 MT1BP07438 61 aa7.73□□□□□ -1.17
COL16A1-215ENST00000488897 CRCT1Q9UGL9 99 aa7.68□□□□□ -1.18
COL16A1-215ENST00000488897 KRTAP19-8Q3LI54 63 aa7.66□□□□□ -1.18
COL16A1-215ENST00000488897 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
COL16A1-215ENST00000488897 KRTAP9-6A0A140TA67 174 aa7.57□□□□□ -1.2
COL16A1-215ENST00000488897 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.2
COL16A1-215ENST00000488897 KRTAP19-6Q3LI70 58 aa7.47□□□□□ -1.21
COL16A1-215ENST00000488897 KMT2DO14686 5537 aa7.42□□□□□ -1.22
COL16A1-215ENST00000488897 MACF1Q9UPN3 7388 aaKnown RBP7.39□□□□□ -1.23
COL16A1-215ENST00000488897 MT1XP80297 61 aa7.39□□□□□ -1.23
COL16A1-215ENST00000488897 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
COL16A1-215ENST00000488897 KRTAP10-5P60370 271 aa7.37□□□□□ -1.23
COL16A1-215ENST00000488897 SYNE2Q8WXH0 6885 aaKnown RBP7.35□□□□□ -1.23
COL16A1-215ENST00000488897 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
COL16A1-215ENST00000488897 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
COL16A1-215ENST00000488897 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
COL16A1-215ENST00000488897 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.14□□□□□ -1.27
COL16A1-215ENST00000488897 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
COL16A1-215ENST00000488897 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
COL16A1-215ENST00000488897 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
COL16A1-215ENST00000488897 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
COL16A1-215ENST00000488897 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
COL16A1-215ENST00000488897 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.31
COL16A1-215ENST00000488897 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms