RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
CLIC4-202ENST00000488683 H0YAA0 97 aa6.67□□□□□ -1.34
CLIC4-202ENST00000488683 Q5VSD8 79 aa6.65□□□□□ -1.34
CLIC4-202ENST00000488683 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.35
CLIC4-202ENST00000488683 LRP2P98164 4655 aa6.63□□□□□ -1.35
CLIC4-202ENST00000488683 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
CLIC4-202ENST00000488683 COX6B2Q6YFQ2 88 aa6.6□□□□□ -1.35
CLIC4-202ENST00000488683 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
CLIC4-202ENST00000488683 A0A1B0GU33 70 aa6.58□□□□□ -1.36
CLIC4-202ENST00000488683 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
CLIC4-202ENST00000488683 CRIPTQ9P021 101 aa6.55□□□□□ -1.36
CLIC4-202ENST00000488683 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
CLIC4-202ENST00000488683 XP32Q5T750 250 aa6.54□□□□□ -1.36
CLIC4-202ENST00000488683 RPL37P61927 97 aaKnown RBP6.52□□□□□ -1.37
CLIC4-202ENST00000488683 LCE2DQ5TA82 110 aaPredicted RBP6.52□□□□□ -1.37
CLIC4-202ENST00000488683 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
CLIC4-202ENST00000488683 A0A0D9SG42 100 aa6.48□□□□□ -1.37
CLIC4-202ENST00000488683 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
CLIC4-202ENST00000488683 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
CLIC4-202ENST00000488683 KRTAP10-6P60371 365 aaPredicted RBP6.43□□□□□ -1.38
CLIC4-202ENST00000488683 P0C880 135 aa6.41□□□□□ -1.38
CLIC4-202ENST00000488683 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.39
CLIC4-202ENST00000488683 S4R3F8 94 aa6.39□□□□□ -1.39
CLIC4-202ENST00000488683 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
CLIC4-202ENST00000488683 MUC2Q02817 5179 aa6.34□□□□□ -1.39
CLIC4-202ENST00000488683 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
CLIC4-202ENST00000488683 K7ERS5 55 aa6.25□□□□□ -1.41
CLIC4-202ENST00000488683 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
CLIC4-202ENST00000488683 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
CLIC4-202ENST00000488683 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
CLIC4-202ENST00000488683 HERC2O95714 4834 aa6.2□□□□□ -1.42
CLIC4-202ENST00000488683 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
CLIC4-202ENST00000488683 H3BS24 57 aa6.2□□□□□ -1.42
CLIC4-202ENST00000488683 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
CLIC4-202ENST00000488683 ROMO1P60602 79 aa6.17□□□□□ -1.42
CLIC4-202ENST00000488683 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
CLIC4-202ENST00000488683 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
CLIC4-202ENST00000488683 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
CLIC4-202ENST00000488683 HERC1Q15751 4861 aa6.08□□□□□ -1.44
CLIC4-202ENST00000488683 M0QZ58 72 aa6.03□□□□□ -1.44
CLIC4-202ENST00000488683 PCLOQ9Y6V0 5065 aa6.01□□□□□ -1.45
CLIC4-202ENST00000488683 J3QL48 77 aa6.01□□□□□ -1.45
CLIC4-202ENST00000488683 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
CLIC4-202ENST00000488683 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
CLIC4-202ENST00000488683 R4GN34 69 aa5.97□□□□□ -1.45
CLIC4-202ENST00000488683 RNF213Q63HN8 5207 aa5.93□□□□□ -1.46
CLIC4-202ENST00000488683 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
CLIC4-202ENST00000488683 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
CLIC4-202ENST00000488683 FLGP20930 4061 aaPredicted RBP5.82□□□□□ -1.48
CLIC4-202ENST00000488683 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
CLIC4-202ENST00000488683 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
CLIC4-202ENST00000488683 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
CLIC4-202ENST00000488683 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
CLIC4-202ENST00000488683 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
CLIC4-202ENST00000488683 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
CLIC4-202ENST00000488683 M0R2T5 61 aa5.52□□□□□ -1.53
CLIC4-202ENST00000488683 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
CLIC4-202ENST00000488683 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
CLIC4-202ENST00000488683 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
CLIC4-202ENST00000488683 MT1HP80294 61 aa5.41□□□□□ -1.54
CLIC4-202ENST00000488683 SPRR2GQ9BYE4 73 aa5.39□□□□□ -1.55
CLIC4-202ENST00000488683 MT1FP04733 61 aa5.37□□□□□ -1.55
CLIC4-202ENST00000488683 TNP1P09430 55 aa5.37□□□□□ -1.55
CLIC4-202ENST00000488683 LCE2BO14633 110 aa5.36□□□□□ -1.55
CLIC4-202ENST00000488683 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
CLIC4-202ENST00000488683 MT2AP02795 61 aa5.32□□□□□ -1.56
CLIC4-202ENST00000488683 USH2AO75445 5202 aa5.3□□□□□ -1.56
CLIC4-202ENST00000488683 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
CLIC4-202ENST00000488683 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
CLIC4-202ENST00000488683 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
CLIC4-202ENST00000488683 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
CLIC4-202ENST00000488683 KMT2DO14686 5537 aa5.2□□□□□ -1.58
CLIC4-202ENST00000488683 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
CLIC4-202ENST00000488683 MT1BP07438 61 aa5.14□□□□□ -1.59
CLIC4-202ENST00000488683 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
CLIC4-202ENST00000488683 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
CLIC4-202ENST00000488683 MT1XP80297 61 aa5.1□□□□□ -1.59
CLIC4-202ENST00000488683 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
CLIC4-202ENST00000488683 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
CLIC4-202ENST00000488683 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
CLIC4-202ENST00000488683 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
CLIC4-202ENST00000488683 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
CLIC4-202ENST00000488683 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
CLIC4-202ENST00000488683 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
CLIC4-202ENST00000488683 KRTAP12-3P60328 96 aa4.9□□□□□ -1.62
CLIC4-202ENST00000488683 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
CLIC4-202ENST00000488683 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
CLIC4-202ENST00000488683 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
CLIC4-202ENST00000488683 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
CLIC4-202ENST00000488683 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
CLIC4-202ENST00000488683 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
CLIC4-202ENST00000488683 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
CLIC4-202ENST00000488683 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
CLIC4-202ENST00000488683 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
CLIC4-202ENST00000488683 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
CLIC4-202ENST00000488683 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
CLIC4-202ENST00000488683 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
CLIC4-202ENST00000488683 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
CLIC4-202ENST00000488683 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
CLIC4-202ENST00000488683 INE1O15225 51 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms