RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 KRTAP9-7A8MTY7 169 aa10.87□□□□□ -0.67
RHBDD3-205ENST00000488106 KLKP1Q107X0 134 aa10.84□□□□□ -0.67
RHBDD3-205ENST00000488106 SCGB1A1P11684 91 aa10.8□□□□□ -0.68
RHBDD3-205ENST00000488106 KRTAP19-6Q3LI70 58 aa10.77□□□□□ -0.69
RHBDD3-205ENST00000488106 A8MUN3 132 aa10.74□□□□□ -0.69
RHBDD3-205ENST00000488106 K7ERU9 68 aa10.72□□□□□ -0.69
RHBDD3-205ENST00000488106 NDUFC1O43677 76 aa10.72□□□□□ -0.69
RHBDD3-205ENST00000488106 H3BPC8 53 aa10.7□□□□□ -0.7
RHBDD3-205ENST00000488106 MT-ATP8P03928 68 aa10.7□□□□□ -0.7
RHBDD3-205ENST00000488106 IMUPQ9GZP8 106 aa10.67□□□□□ -0.7
RHBDD3-205ENST00000488106 SPRR2GQ9BYE4 73 aa10.64□□□□□ -0.71
RHBDD3-205ENST00000488106 Q5VV11 94 aa10.58□□□□□ -0.72
RHBDD3-205ENST00000488106 MT1BP07438 61 aa10.56□□□□□ -0.72
RHBDD3-205ENST00000488106 MACF1Q9UPN3 7388 aaKnown RBP10.56□□□□□ -0.72
RHBDD3-205ENST00000488106 KRTAP19-8Q3LI54 63 aa10.55□□□□□ -0.72
RHBDD3-205ENST00000488106 H0YAA0 97 aa10.53□□□□□ -0.72
RHBDD3-205ENST00000488106 DMAC1Q96GE9 116 aa10.53□□□□□ -0.72
RHBDD3-205ENST00000488106 CRIPTQ9P021 101 aa10.52□□□□□ -0.73
RHBDD3-205ENST00000488106 TRAV7A0A075B6U4 112 aa10.5□□□□□ -0.73
RHBDD3-205ENST00000488106 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
RHBDD3-205ENST00000488106 SMIM20Q8N5G0 67 aa10.5□□□□□ -0.73
RHBDD3-205ENST00000488106 SYNE2Q8WXH0 6885 aaKnown RBP10.45□□□□□ -0.74
RHBDD3-205ENST00000488106 A6NN06 94 aa10.39□□□□□ -0.75
RHBDD3-205ENST00000488106 SNURFQ9Y675 71 aa10.32□□□□□ -0.76
RHBDD3-205ENST00000488106 ACYP2P14621 99 aa10.29□□□□□ -0.76
RHBDD3-205ENST00000488106 P0C880 135 aa10.28□□□□□ -0.76
RHBDD3-205ENST00000488106 KRTAP10-5P60370 271 aa10.27□□□□□ -0.77
RHBDD3-205ENST00000488106 C20orf197Q8N268 126 aa10.25□□□□□ -0.77
RHBDD3-205ENST00000488106 SERP2Q8N6R1 65 aa10.21□□□□□ -0.77
RHBDD3-205ENST00000488106 R4GN34 69 aa10.21□□□□□ -0.77
RHBDD3-205ENST00000488106 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
RHBDD3-205ENST00000488106 CHKB-CPT1BH3BT56 60 aa10.16□□□□□ -0.78
RHBDD3-205ENST00000488106 M0QZ58 72 aa10.16□□□□□ -0.78
RHBDD3-205ENST00000488106 KRTAP6-3Q3LI67 103 aa10.15□□□□□ -0.78
RHBDD3-205ENST00000488106 SPTSSBQ8NFR3 76 aa10.15□□□□□ -0.78
RHBDD3-205ENST00000488106 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
RHBDD3-205ENST00000488106 PLAC4Q8WY50 150 aa10.06□□□□□ -0.8
RHBDD3-205ENST00000488106 LINC01554Q52M75 96 aa10.03□□□□□ -0.8
RHBDD3-205ENST00000488106 PRO2289Q9P1D8 64 aa9.96□□□□□ -0.82
RHBDD3-205ENST00000488106 MT1XP80297 61 aa9.95□□□□□ -0.82
RHBDD3-205ENST00000488106 COX7CP15954 63 aa9.94□□□□□ -0.82
RHBDD3-205ENST00000488106 COA5Q86WW8 74 aa9.85□□□□□ -0.83
RHBDD3-205ENST00000488106 CYSTM1Q9H1C7 97 aa9.8□□□□□ -0.84
RHBDD3-205ENST00000488106 MUC12Q9UKN1 5478 aa9.8□□□□□ -0.84
RHBDD3-205ENST00000488106 NEBP20929 6669 aa9.78□□□□□ -0.84
RHBDD3-205ENST00000488106 KMT2DO14686 5537 aa9.77□□□□□ -0.85
RHBDD3-205ENST00000488106 H7BZZ5 65 aa9.76□□□□□ -0.85
RHBDD3-205ENST00000488106 KRTAP5-9P26371 169 aa9.72□□□□□ -0.85
RHBDD3-205ENST00000488106 ANAPC13Q9BS18 74 aa9.71□□□□□ -0.86
RHBDD3-205ENST00000488106 KRTAP13-4Q3LI77 160 aa9.68□□□□□ -0.86
RHBDD3-205ENST00000488106 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
RHBDD3-205ENST00000488106 SEC61GP60059 68 aa9.6□□□□□ -0.87
RHBDD3-205ENST00000488106 SERP1Q9Y6X1 66 aa9.58□□□□□ -0.88
RHBDD3-205ENST00000488106 KRTAP8-1Q8IUC2 63 aa9.55□□□□□ -0.88
RHBDD3-205ENST00000488106 SPRR2FQ96RM1 72 aa9.55□□□□□ -0.88
RHBDD3-205ENST00000488106 MDN1Q9NU22 5596 aa9.53□□□□□ -0.88
RHBDD3-205ENST00000488106 KRTAP20-1Q3LI63 56 aa9.53□□□□□ -0.88
RHBDD3-205ENST00000488106 CCDC179H3BU77 68 aa9.51□□□□□ -0.89
RHBDD3-205ENST00000488106 KRTAP10-7P60409 375 aaPredicted RBP9.51□□□□□ -0.89
RHBDD3-205ENST00000488106 KRTAP4-8A0A0G2JLE6 195 aa9.48□□□□□ -0.89
RHBDD3-205ENST00000488106 KRTAP4-8Q9BYQ9 185 aa9.48□□□□□ -0.89
RHBDD3-205ENST00000488106 A0A0D9SG42 100 aa9.44□□□□□ -0.9
RHBDD3-205ENST00000488106 KRTAP10-12P60413 245 aa9.43□□□□□ -0.9
RHBDD3-205ENST00000488106 SPATA8Q6RVD6 105 aa9.43□□□□□ -0.9
RHBDD3-205ENST00000488106 CAMK2N1Q7Z7J9 78 aa9.43□□□□□ -0.9
RHBDD3-205ENST00000488106 A0A1B0GU33 70 aa9.41□□□□□ -0.9
RHBDD3-205ENST00000488106 SPRR2EP22531 72 aa9.37□□□□□ -0.91
RHBDD3-205ENST00000488106 SPRR2BP35325 72 aa9.37□□□□□ -0.91
RHBDD3-205ENST00000488106 SPRR2AP35326 72 aa9.37□□□□□ -0.91
RHBDD3-205ENST00000488106 A0A1B0GU69 56 aa9.34□□□□□ -0.91
RHBDD3-205ENST00000488106 ATP5EP56381 51 aaPredicted RBP9.31□□□□□ -0.92
RHBDD3-205ENST00000488106 SPINT4Q6UDR6 99 aa9.27□□□□□ -0.93
RHBDD3-205ENST00000488106 LCE1AQ5T7P2 110 aa9.22□□□□□ -0.93
RHBDD3-205ENST00000488106 KRTAP2-3P0C7H8 128 aa9.2□□□□□ -0.94
RHBDD3-205ENST00000488106 KRTAP12-1P59990 96 aa9.2□□□□□ -0.94
RHBDD3-205ENST00000488106 KRTAP2-4Q9BYR9 128 aa9.2□□□□□ -0.94
RHBDD3-205ENST00000488106 SMIM26A0A096LP01 95 aa9.15□□□□□ -0.94
RHBDD3-205ENST00000488106 TMEM258P61165 79 aa9.14□□□□□ -0.95
RHBDD3-205ENST00000488106 A8MU10 97 aa9.12□□□□□ -0.95
RHBDD3-205ENST00000488106 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
RHBDD3-205ENST00000488106 SPRR2DP22532 72 aa9.05□□□□□ -0.96
RHBDD3-205ENST00000488106 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
RHBDD3-205ENST00000488106 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
RHBDD3-205ENST00000488106 KRTAP2-1Q9BYU5 128 aa8.9□□□□□ -0.98
RHBDD3-205ENST00000488106 KRTAP19-7Q3SYF9 63 aa8.88□□□□□ -0.99
RHBDD3-205ENST00000488106 MT1EP04732 61 aa8.8□□□□□ -1
RHBDD3-205ENST00000488106 UQCR11O14957 56 aa8.79□□□□□ -1
RHBDD3-205ENST00000488106 LCE3BQ5TA77 95 aa8.78□□□□□ -1
RHBDD3-205ENST00000488106 C10orf95Q9H7T3 257 aa8.78□□□□□ -1
RHBDD3-205ENST00000488106 KRTAP19-5Q3LI72 72 aa8.73□□□□□ -1.01
RHBDD3-205ENST00000488106 TNP1P09430 55 aa8.71□□□□□ -1.02
RHBDD3-205ENST00000488106 KRTAP19-3Q7Z4W3 81 aa8.69□□□□□ -1.02
RHBDD3-205ENST00000488106 PCP4P48539 62 aa8.67□□□□□ -1.02
RHBDD3-205ENST00000488106 LCE5AQ5TCM9 118 aa8.67□□□□□ -1.02
RHBDD3-205ENST00000488106 LCE3AQ5TA76 89 aa8.64□□□□□ -1.03
RHBDD3-205ENST00000488106 MIR22HGQ0VDD5 57 aa8.63□□□□□ -1.03
RHBDD3-205ENST00000488106 PSPHP1O15172 72 aa8.59□□□□□ -1.03
RHBDD3-205ENST00000488106 V9GYY9 64 aa8.59□□□□□ -1.03
RHBDD3-205ENST00000488106 Q1T7F1 81 aa8.54□□□□□ -1.04
RHBDD3-205ENST00000488106 MT1GP13640 62 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms