RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 DSPP15924 2871 aaKnown RBP1.06□□□□□ -2.24
SRRM1-213ENST00000485441 STAB2Q8WWQ8 2551 aa1.05□□□□□ -2.24
SRRM1-213ENST00000485441 GVQW2A0A096LPI5 108 aaPredicted RBP1.05□□□□□ -2.24
SRRM1-213ENST00000485441 H0YAA0 97 aa1.05□□□□□ -2.24
SRRM1-213ENST00000485441 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
SRRM1-213ENST00000485441 CLPSL2Q6UWE3 100 aa1.05□□□□□ -2.24
SRRM1-213ENST00000485441 SSPOA2VEC9 5147 aa1.05□□□□□ -2.24
SRRM1-213ENST00000485441 OTOGQ6ZRI0 2925 aa1.05□□□□□ -2.24
SRRM1-213ENST00000485441 FSIP2Q5CZC0 6907 aa1.04□□□□□ -2.24
SRRM1-213ENST00000485441 ACANP16112 2415 aa1.04□□□□□ -2.24
SRRM1-213ENST00000485441 NEBP20929 6669 aa1.04□□□□□ -2.24
SRRM1-213ENST00000485441 DEFB131AP59861 70 aa1.04□□□□□ -2.24
SRRM1-213ENST00000485441 LRBAP50851 2863 aa1.04□□□□□ -2.24
SRRM1-213ENST00000485441 DEFB133Q30KQ1 61 aa1.03□□□□□ -2.24
SRRM1-213ENST00000485441 DEFB109BQ30KR1 87 aa1.03□□□□□ -2.24
SRRM1-213ENST00000485441 USMG5Q96IX5 58 aa1.03□□□□□ -2.24
SRRM1-213ENST00000485441 MRPL34Q9BQ48 92 aaKnown RBP1.03□□□□□ -2.24
SRRM1-213ENST00000485441 C10orf95Q9H7T3 257 aa1.03□□□□□ -2.24
SRRM1-213ENST00000485441 SYNE2Q8WXH0 6885 aaKnown RBP1.02□□□□□ -2.25
SRRM1-213ENST00000485441 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
SRRM1-213ENST00000485441 LELP1Q5T871 98 aa1.02□□□□□ -2.25
SRRM1-213ENST00000485441 APCP25054 2843 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 H3BUA1 57 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 DEFB130BP0DP73 79 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 DEFB130AP0DP74 79 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 DEFB136Q30KP8 78 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 SVEP1Q4LDE5 3571 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 WNK2Q9Y3S1 2297 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 ADGRG4Q8IZF6 3080 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 CHD7Q9P2D1 2997 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 DMDP11532 3685 aa1.01□□□□□ -2.25
SRRM1-213ENST00000485441 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
SRRM1-213ENST00000485441 SPTBN1Q01082 2364 aaKnown RBP1□□□□□ -2.25
SRRM1-213ENST00000485441 TRIOO75962 3097 aa1□□□□□ -2.25
SRRM1-213ENST00000485441 SPINK1P00995 79 aa1□□□□□ -2.25
SRRM1-213ENST00000485441 SPRR1AP35321 89 aa1□□□□□ -2.25
SRRM1-213ENST00000485441 PRLHP81277 87 aa1□□□□□ -2.25
SRRM1-213ENST00000485441 NOP10Q9NPE3 64 aaKnown RBP1□□□□□ -2.25
SRRM1-213ENST00000485441 CUBNO60494 3623 aa1□□□□□ -2.25
SRRM1-213ENST00000485441 COX6B2Q6YFQ2 88 aa0.98□□□□□ -2.25
SRRM1-213ENST00000485441 CSMD2Q7Z408 3487 aa0.98□□□□□ -2.25
SRRM1-213ENST00000485441 A0A096LPF7 62 aa0.97□□□□□ -2.25
SRRM1-213ENST00000485441 A0A0D9SG42 100 aa0.97□□□□□ -2.25
SRRM1-213ENST00000485441 SPRR1BP22528 89 aa0.97□□□□□ -2.25
SRRM1-213ENST00000485441 UBE2DNLQ8IWF7 75 aa0.97□□□□□ -2.25
SRRM1-213ENST00000485441 ALMS1Q8TCU4 4167 aa0.97□□□□□ -2.25
SRRM1-213ENST00000485441 DMXL2Q8TDJ6 3036 aa0.97□□□□□ -2.25
SRRM1-213ENST00000485441 DCHS2Q6V1P9 2916 aa0.96□□□□□ -2.26
SRRM1-213ENST00000485441 H3BUX3 64 aa0.96□□□□□ -2.26
SRRM1-213ENST00000485441 MUC5BQ9HC84 5762 aaPredicted RBP0.95□□□□□ -2.26
SRRM1-213ENST00000485441 VPS13CQ709C8 3753 aa0.95□□□□□ -2.26
SRRM1-213ENST00000485441 A0A096LNI7 61 aa0.95□□□□□ -2.26
SRRM1-213ENST00000485441 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
SRRM1-213ENST00000485441 PRO0255Q9UI72 69 aa0.95□□□□□ -2.26
SRRM1-213ENST00000485441 APLNQ9ULZ1 77 aa0.95□□□□□ -2.26
SRRM1-213ENST00000485441 U3KQA8 63 aa0.95□□□□□ -2.26
SRRM1-213ENST00000485441 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
SRRM1-213ENST00000485441 ATMQ13315 3056 aa0.95□□□□□ -2.26
SRRM1-213ENST00000485441 S4R3F8 94 aa0.94□□□□□ -2.26
SRRM1-213ENST00000485441 PKDREJQ9NTG1 2253 aa0.94□□□□□ -2.26
SRRM1-213ENST00000485441 MAP1AP78559 2803 aaPredicted RBP0.93□□□□□ -2.26
SRRM1-213ENST00000485441 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
SRRM1-213ENST00000485441 AKAP6Q13023 2319 aa0.93□□□□□ -2.26
SRRM1-213ENST00000485441 ACACAQ13085 2346 aa0.93□□□□□ -2.26
SRRM1-213ENST00000485441 CENPEQ02224 2701 aa0.93□□□□□ -2.26
SRRM1-213ENST00000485441 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
SRRM1-213ENST00000485441 SPINK6Q6UWN8 80 aa0.92□□□□□ -2.26
SRRM1-213ENST00000485441 LAMA5O15230 3695 aa0.92□□□□□ -2.26
SRRM1-213ENST00000485441 CHD9Q3L8U1 2897 aa0.91□□□□□ -2.26
SRRM1-213ENST00000485441 PRKDCP78527 4128 aaKnown RBP0.91□□□□□ -2.26
SRRM1-213ENST00000485441 HMCN2Q8NDA2 5059 aa0.91□□□□□ -2.26
SRRM1-213ENST00000485441 COL7A1Q02388 2944 aa0.91□□□□□ -2.26
SRRM1-213ENST00000485441 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.27
SRRM1-213ENST00000485441 RNF213Q63HN8 5207 aa0.89□□□□□ -2.27
SRRM1-213ENST00000485441 HTN3P15516 51 aa0.89□□□□□ -2.27
SRRM1-213ENST00000485441 LINC01556Q5JQF7 62 aa0.88□□□□□ -2.27
SRRM1-213ENST00000485441 KMT2DO14686 5537 aa0.87□□□□□ -2.27
SRRM1-213ENST00000485441 AKAP9Q99996 3911 aa0.87□□□□□ -2.27
SRRM1-213ENST00000485441 DEFB4AO15263 64 aa0.87□□□□□ -2.27
SRRM1-213ENST00000485441 SPART-AS1P0CW21 52 aa0.87□□□□□ -2.27
SRRM1-213ENST00000485441 DSTQ03001 7570 aaKnown RBP0.86□□□□□ -2.27
SRRM1-213ENST00000485441 ANK2Q01484 3957 aa0.86□□□□□ -2.27
SRRM1-213ENST00000485441 KRTAP2-3P0C7H8 128 aa0.86□□□□□ -2.27
SRRM1-213ENST00000485441 KRTAP2-4Q9BYR9 128 aa0.86□□□□□ -2.27
SRRM1-213ENST00000485441 MGAQ8IWI9 3026 aa0.86□□□□□ -2.27
SRRM1-213ENST00000485441 KMT2AQ03164 3969 aa0.86□□□□□ -2.27
SRRM1-213ENST00000485441 H3BNG1 76 aa0.85□□□□□ -2.27
SRRM1-213ENST00000485441 DEFB124Q8NES8 71 aa0.85□□□□□ -2.27
SRRM1-213ENST00000485441 DEFB135Q30KP9 77 aa0.84□□□□□ -2.27
SRRM1-213ENST00000485441 Q5VSD8 79 aa0.84□□□□□ -2.27
SRRM1-213ENST00000485441 TACC2O95359 2948 aa0.83□□□□□ -2.28
SRRM1-213ENST00000485441 M0QZ58 72 aa0.83□□□□□ -2.28
SRRM1-213ENST00000485441 SRRM2Q9UQ35 2752 aaKnown RBP0.83□□□□□ -2.28
SRRM1-213ENST00000485441 DYNC2H1Q8NCM8 4307 aaKnown RBP0.83□□□□□ -2.28
SRRM1-213ENST00000485441 DNAH1Q9P2D7 4330 aa0.83□□□□□ -2.28
SRRM1-213ENST00000485441 FAT3Q8TDW7 4589 aa0.82□□□□□ -2.28
SRRM1-213ENST00000485441 MUC5ACP98088 5654 aa0.82□□□□□ -2.28
SRRM1-213ENST00000485441 LAMA1P25391 3075 aa0.82□□□□□ -2.28
SRRM1-213ENST00000485441 HECTD4Q9Y4D8 3996 aa0.8□□□□□ -2.28
SRRM1-213ENST00000485441 TRRAPQ9Y4A5 3859 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms