RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 LINC00208Q96KT6 92 aa8.36□□□□□ -1.07
SREBF1-213ENST00000485080 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
SREBF1-213ENST00000485080 H3BPC8 53 aa8.34□□□□□ -1.07
SREBF1-213ENST00000485080 CSAG1Q6PB30 78 aa8.34□□□□□ -1.07
SREBF1-213ENST00000485080 LCA10Q71F78 164 aa8.34□□□□□ -1.07
SREBF1-213ENST00000485080 MT-ATP8P03928 68 aa8.33□□□□□ -1.08
SREBF1-213ENST00000485080 SCGB1A1P11684 91 aa8.33□□□□□ -1.08
SREBF1-213ENST00000485080 SSPOA2VEC9 5147 aa8.3□□□□□ -1.08
SREBF1-213ENST00000485080 A8MUN3 132 aa8.29□□□□□ -1.08
SREBF1-213ENST00000485080 KLKP1Q107X0 134 aa8.29□□□□□ -1.08
SREBF1-213ENST00000485080 KRTAP9-9Q9BYP9 154 aa8.25□□□□□ -1.09
SREBF1-213ENST00000485080 KRTAP9-4Q9BYQ2 154 aa8.25□□□□□ -1.09
SREBF1-213ENST00000485080 SMIM20Q8N5G0 67 aa8.24□□□□□ -1.09
SREBF1-213ENST00000485080 FAM236AA0A1B0GUQ0 79 aa8.2□□□□□ -1.1
SREBF1-213ENST00000485080 FAM236BA0A1B0GV22 79 aa8.2□□□□□ -1.1
SREBF1-213ENST00000485080 TRAV7A0A075B6U4 112 aa8.19□□□□□ -1.1
SREBF1-213ENST00000485080 NDUFC1O43677 76 aa8.15□□□□□ -1.1
SREBF1-213ENST00000485080 KRTAP4-8A0A0G2JLE6 195 aa8.11□□□□□ -1.11
SREBF1-213ENST00000485080 DMAC1Q96GE9 116 aa8.11□□□□□ -1.11
SREBF1-213ENST00000485080 H0YAA0 97 aa8.09□□□□□ -1.11
SREBF1-213ENST00000485080 FCGBPQ9Y6R7 5405 aaPredicted RBP8.08□□□□□ -1.12
SREBF1-213ENST00000485080 SPRR2GQ9BYE4 73 aa8.06□□□□□ -1.12
SREBF1-213ENST00000485080 KRTAP19-6Q3LI70 58 aa8.04□□□□□ -1.12
SREBF1-213ENST00000485080 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
SREBF1-213ENST00000485080 SERP2Q8N6R1 65 aa8□□□□□ -1.13
SREBF1-213ENST00000485080 PCP4P48539 62 aa7.99□□□□□ -1.13
SREBF1-213ENST00000485080 KRTAP19-8Q3LI54 63 aa7.98□□□□□ -1.13
SREBF1-213ENST00000485080 ACYP2P14621 99 aa7.94□□□□□ -1.14
SREBF1-213ENST00000485080 SNURFQ9Y675 71 aa7.93□□□□□ -1.14
SREBF1-213ENST00000485080 MT1BP07438 61 aa7.91□□□□□ -1.14
SREBF1-213ENST00000485080 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
SREBF1-213ENST00000485080 LCE1DQ5T752 114 aa7.9□□□□□ -1.14
SREBF1-213ENST00000485080 Q5VV11 94 aa7.9□□□□□ -1.14
SREBF1-213ENST00000485080 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
SREBF1-213ENST00000485080 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.14
SREBF1-213ENST00000485080 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
SREBF1-213ENST00000485080 KRTAP4-7Q9BYR0 210 aa7.83□□□□□ -1.16
SREBF1-213ENST00000485080 SPTSSBQ8NFR3 76 aa7.81□□□□□ -1.16
SREBF1-213ENST00000485080 COX7CP15954 63 aa7.8□□□□□ -1.16
SREBF1-213ENST00000485080 P0C880 135 aa7.77□□□□□ -1.17
SREBF1-213ENST00000485080 MACF1Q9UPN3 7388 aaKnown RBP7.75□□□□□ -1.17
SREBF1-213ENST00000485080 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
SREBF1-213ENST00000485080 R4GN34 69 aa7.71□□□□□ -1.18
SREBF1-213ENST00000485080 A6NN06 94 aa7.7□□□□□ -1.18
SREBF1-213ENST00000485080 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
SREBF1-213ENST00000485080 KRTAP10-5P60370 271 aa7.69□□□□□ -1.18
SREBF1-213ENST00000485080 KRTAP19-4Q3LI73 84 aa7.68□□□□□ -1.18
SREBF1-213ENST00000485080 H3BS24 57 aa7.67□□□□□ -1.18
SREBF1-213ENST00000485080 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
SREBF1-213ENST00000485080 KRTAP4-9Q9BYQ8 210 aa7.66□□□□□ -1.18
SREBF1-213ENST00000485080 CCDC179H3BU77 68 aa7.65□□□□□ -1.18
SREBF1-213ENST00000485080 H7BZZ5 65 aa7.64□□□□□ -1.19
SREBF1-213ENST00000485080 M0QZ58 72 aa7.63□□□□□ -1.19
SREBF1-213ENST00000485080 CYSTM1Q9H1C7 97 aa7.61□□□□□ -1.19
SREBF1-213ENST00000485080 SYNE2Q8WXH0 6885 aaKnown RBP7.61□□□□□ -1.19
SREBF1-213ENST00000485080 COA5Q86WW8 74 aa7.6□□□□□ -1.19
SREBF1-213ENST00000485080 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
SREBF1-213ENST00000485080 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
SREBF1-213ENST00000485080 KRTAP6-3Q3LI67 103 aa7.48□□□□□ -1.21
SREBF1-213ENST00000485080 KRTAP4-2Q9BYR5 136 aa7.48□□□□□ -1.21
SREBF1-213ENST00000485080 MT1XP80297 61 aa7.47□□□□□ -1.21
SREBF1-213ENST00000485080 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
SREBF1-213ENST00000485080 TMEM258P61165 79 aa7.42□□□□□ -1.22
SREBF1-213ENST00000485080 KRTAP4-11Q9BYQ6 195 aa7.39□□□□□ -1.23
SREBF1-213ENST00000485080 SEC61GP60059 68 aa7.38□□□□□ -1.23
SREBF1-213ENST00000485080 ATP5EP56381 51 aaPredicted RBP7.36□□□□□ -1.23
SREBF1-213ENST00000485080 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
SREBF1-213ENST00000485080 SERP1Q9Y6X1 66 aa7.36□□□□□ -1.23
SREBF1-213ENST00000485080 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
SREBF1-213ENST00000485080 KRTAP12-2P59991 146 aa7.3□□□□□ -1.24
SREBF1-213ENST00000485080 KRTAP5-9P26371 169 aa7.26□□□□□ -1.25
SREBF1-213ENST00000485080 MUC12Q9UKN1 5478 aa7.26□□□□□ -1.25
SREBF1-213ENST00000485080 KMT2DO14686 5537 aa7.26□□□□□ -1.25
SREBF1-213ENST00000485080 A0A1B0GU33 70 aa7.24□□□□□ -1.25
SREBF1-213ENST00000485080 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
SREBF1-213ENST00000485080 A0A1B0GU69 56 aa7.2□□□□□ -1.26
SREBF1-213ENST00000485080 NEBP20929 6669 aa7.17□□□□□ -1.26
SREBF1-213ENST00000485080 SPATA8Q6RVD6 105 aa7.15□□□□□ -1.26
SREBF1-213ENST00000485080 KRTAP10-12P60413 245 aa7.13□□□□□ -1.27
SREBF1-213ENST00000485080 MDN1Q9NU22 5596 aa7.12□□□□□ -1.27
SREBF1-213ENST00000485080 A0A0D9SG42 100 aa7.1□□□□□ -1.27
SREBF1-213ENST00000485080 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
SREBF1-213ENST00000485080 CAMK2N1Q7Z7J9 78 aa7.1□□□□□ -1.27
SREBF1-213ENST00000485080 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
SREBF1-213ENST00000485080 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
SREBF1-213ENST00000485080 PRR15LQ9BU68 103 aa7.07□□□□□ -1.28
SREBF1-213ENST00000485080 SMIM26A0A096LP01 95 aa7.05□□□□□ -1.28
SREBF1-213ENST00000485080 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
SREBF1-213ENST00000485080 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
SREBF1-213ENST00000485080 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
SREBF1-213ENST00000485080 A8MU10 97 aa6.93□□□□□ -1.3
SREBF1-213ENST00000485080 UQCR11O14957 56 aa6.85□□□□□ -1.31
SREBF1-213ENST00000485080 Q1T7F1 81 aa6.85□□□□□ -1.31
SREBF1-213ENST00000485080 V9GYY9 64 aa6.85□□□□□ -1.31
SREBF1-213ENST00000485080 SPRR2EP22531 72 aa6.84□□□□□ -1.31
SREBF1-213ENST00000485080 SPRR2BP35325 72 aa6.84□□□□□ -1.31
SREBF1-213ENST00000485080 SPRR2AP35326 72 aa6.84□□□□□ -1.31
SREBF1-213ENST00000485080 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
SREBF1-213ENST00000485080 KRTAP20-1Q3LI63 56 aa6.76□□□□□ -1.33
SREBF1-213ENST00000485080 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms