RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 RPL37P61927 97 aaKnown RBP10.25□□□□□ -0.77
LIMS2-215ENST00000484252 HSPG2P98160 4391 aa10.24□□□□□ -0.77
LIMS2-215ENST00000484252 K7ERS5 55 aa10.24□□□□□ -0.77
LIMS2-215ENST00000484252 FAT3Q8TDW7 4589 aa10.24□□□□□ -0.77
LIMS2-215ENST00000484252 Q5VSD8 79 aa10.22□□□□□ -0.77
LIMS2-215ENST00000484252 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
LIMS2-215ENST00000484252 RYR3Q15413 4870 aa10.21□□□□□ -0.78
LIMS2-215ENST00000484252 XP32Q5T750 250 aa10.15□□□□□ -0.78
LIMS2-215ENST00000484252 RYR1P21817 5038 aa10.13□□□□□ -0.79
LIMS2-215ENST00000484252 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
LIMS2-215ENST00000484252 KRTAP17-1Q9BYP8 105 aa10.06□□□□□ -0.8
LIMS2-215ENST00000484252 S4R3F8 94 aa10.05□□□□□ -0.8
LIMS2-215ENST00000484252 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
LIMS2-215ENST00000484252 DMBT1Q9UGM3 2413 aaPredicted RBP9.97□□□□□ -0.81
LIMS2-215ENST00000484252 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
LIMS2-215ENST00000484252 MT1HL1P0DM35 61 aa9.95□□□□□ -0.82
LIMS2-215ENST00000484252 KIAA1109Q2LD37 5005 aa9.95□□□□□ -0.82
LIMS2-215ENST00000484252 P0C880 135 aa9.94□□□□□ -0.82
LIMS2-215ENST00000484252 CRIPTQ9P021 101 aa9.93□□□□□ -0.82
LIMS2-215ENST00000484252 MYCBP2O75592 4640 aa9.89□□□□□ -0.83
LIMS2-215ENST00000484252 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
LIMS2-215ENST00000484252 EPPK1P58107 5090 aaKnown RBP9.83□□□□□ -0.84
LIMS2-215ENST00000484252 TPRXLQ17RH7 258 aa9.82□□□□□ -0.84
LIMS2-215ENST00000484252 A0A0D9SG42 100 aa9.8□□□□□ -0.84
LIMS2-215ENST00000484252 SPINT4Q6UDR6 99 aa9.8□□□□□ -0.84
LIMS2-215ENST00000484252 KRTAP15-1Q3LI76 137 aa9.63□□□□□ -0.87
LIMS2-215ENST00000484252 M0QZ58 72 aa9.61□□□□□ -0.87
LIMS2-215ENST00000484252 LRP2P98164 4655 aa9.6□□□□□ -0.87
LIMS2-215ENST00000484252 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
LIMS2-215ENST00000484252 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
LIMS2-215ENST00000484252 LPAP08519 4548 aa9.58□□□□□ -0.88
LIMS2-215ENST00000484252 KRTAP12-1P59990 96 aa9.55□□□□□ -0.88
LIMS2-215ENST00000484252 NDUFAF8A1L188 74 aa9.54□□□□□ -0.88
LIMS2-215ENST00000484252 ABCA13Q86UQ4 5058 aa9.53□□□□□ -0.88
LIMS2-215ENST00000484252 C10orf95Q9H7T3 257 aa9.52□□□□□ -0.88
LIMS2-215ENST00000484252 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.89
LIMS2-215ENST00000484252 BIRC6Q9NR09 4857 aa9.43□□□□□ -0.9
LIMS2-215ENST00000484252 R4GN34 69 aa9.32□□□□□ -0.92
LIMS2-215ENST00000484252 HERC2O95714 4834 aa9.29□□□□□ -0.92
LIMS2-215ENST00000484252 MUC17Q685J3 4493 aa9.26□□□□□ -0.93
LIMS2-215ENST00000484252 J3QL48 77 aa9.25□□□□□ -0.93
LIMS2-215ENST00000484252 KRTAP4-1Q9BYQ7 146 aa9.21□□□□□ -0.93
LIMS2-215ENST00000484252 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
LIMS2-215ENST00000484252 KRTAP19-2Q3LHN2 52 aa9.11□□□□□ -0.95
LIMS2-215ENST00000484252 PCLOQ9Y6V0 5065 aa8.99□□□□□ -0.97
LIMS2-215ENST00000484252 PLAC4Q8WY50 150 aa8.98□□□□□ -0.97
LIMS2-215ENST00000484252 A0A0A0MQY5 61 aa8.87□□□□□ -0.99
LIMS2-215ENST00000484252 LUZP6Q538Z0 58 aa8.87□□□□□ -0.99
LIMS2-215ENST00000484252 CAMK2N1Q7Z7J9 78 aa8.84□□□□□ -0.99
LIMS2-215ENST00000484252 MUC2Q02817 5179 aa8.8□□□□□ -1
LIMS2-215ENST00000484252 HERC1Q15751 4861 aa8.8□□□□□ -1
LIMS2-215ENST00000484252 FLGP20930 4061 aaPredicted RBP8.79□□□□□ -1
LIMS2-215ENST00000484252 PP632Q6XCG6 107 aa8.79□□□□□ -1
LIMS2-215ENST00000484252 HMCN2Q8NDA2 5059 aa8.76□□□□□ -1.01
LIMS2-215ENST00000484252 TNP1P09430 55 aa8.55□□□□□ -1.04
LIMS2-215ENST00000484252 KRTAP23-1A1A580 65 aa8.54□□□□□ -1.04
LIMS2-215ENST00000484252 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
LIMS2-215ENST00000484252 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
LIMS2-215ENST00000484252 FAT4Q6V0I7 4981 aa8.4□□□□□ -1.06
LIMS2-215ENST00000484252 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
LIMS2-215ENST00000484252 KRTAP19-1Q8IUB9 90 aa8.36□□□□□ -1.07
LIMS2-215ENST00000484252 M0R2T5 61 aa8.34□□□□□ -1.07
LIMS2-215ENST00000484252 MT1HP80294 61 aa8.31□□□□□ -1.08
LIMS2-215ENST00000484252 SPRR5A0A1B0GTR4 108 aa8.31□□□□□ -1.08
LIMS2-215ENST00000484252 UBR4Q5T4S7 5183 aa8.3□□□□□ -1.08
LIMS2-215ENST00000484252 MT2AP02795 61 aa8.2□□□□□ -1.1
LIMS2-215ENST00000484252 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
LIMS2-215ENST00000484252 MT1FP04733 61 aa8.18□□□□□ -1.1
LIMS2-215ENST00000484252 KRTAP9-8Q9BYQ0 159 aa8.14□□□□□ -1.11
LIMS2-215ENST00000484252 KRTAP19-8Q3LI54 63 aa8.1□□□□□ -1.11
LIMS2-215ENST00000484252 LCE3AQ5TA76 89 aa8.03□□□□□ -1.12
LIMS2-215ENST00000484252 PRO2289Q9P1D8 64 aa7.94□□□□□ -1.14
LIMS2-215ENST00000484252 MT1BP07438 61 aa7.93□□□□□ -1.14
LIMS2-215ENST00000484252 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.14
LIMS2-215ENST00000484252 KRTAP10-5P60370 271 aa7.9□□□□□ -1.15
LIMS2-215ENST00000484252 MT1XP80297 61 aa7.88□□□□□ -1.15
LIMS2-215ENST00000484252 INE1O15225 51 aa7.84□□□□□ -1.15
LIMS2-215ENST00000484252 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
LIMS2-215ENST00000484252 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
LIMS2-215ENST00000484252 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
LIMS2-215ENST00000484252 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
LIMS2-215ENST00000484252 LCE2AQ5TA79 106 aaPredicted RBP7.48□□□□□ -1.21
LIMS2-215ENST00000484252 LCE2BO14633 110 aa7.48□□□□□ -1.21
LIMS2-215ENST00000484252 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
LIMS2-215ENST00000484252 USH2AO75445 5202 aa7.26□□□□□ -1.25
LIMS2-215ENST00000484252 LCE3CQ5T5A8 94 aa7.24□□□□□ -1.25
LIMS2-215ENST00000484252 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
LIMS2-215ENST00000484252 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
LIMS2-215ENST00000484252 KMT2DO14686 5537 aa7.06□□□□□ -1.28
LIMS2-215ENST00000484252 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
LIMS2-215ENST00000484252 KRTAP19-7Q3SYF9 63 aa7.02□□□□□ -1.29
LIMS2-215ENST00000484252 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
LIMS2-215ENST00000484252 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.3
LIMS2-215ENST00000484252 MT1EP04732 61 aa6.83□□□□□ -1.32
LIMS2-215ENST00000484252 MT1LQ93083 61 aa6.83□□□□□ -1.32
LIMS2-215ENST00000484252 LCE2DQ5TA82 110 aaPredicted RBP6.8□□□□□ -1.32
LIMS2-215ENST00000484252 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
LIMS2-215ENST00000484252 KRTAP19-6Q3LI70 58 aa6.79□□□□□ -1.32
LIMS2-215ENST00000484252 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
LIMS2-215ENST00000484252 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 466.1 ms