RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MUC17Q685J3 4493 aa3.85□□□□□ -1.79
BRCA1-216ENST00000484087 RPS28P62857 69 aaKnown RBP3.85□□□□□ -1.79
BRCA1-216ENST00000484087 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-216ENST00000484087 IGLV7-46A0A075B6I9 117 aa3.84□□□□□ -1.8
BRCA1-216ENST00000484087 LOC101927531A0A1B0GV80 90 aa3.84□□□□□ -1.8
BRCA1-216ENST00000484087 SERP1Q9Y6X1 66 aa3.83□□□□□ -1.8
BRCA1-216ENST00000484087 KRTAP16-1A8MUX0 517 aa3.82□□□□□ -1.8
BRCA1-216ENST00000484087 SPANXA2-OT1Q8N9U9 137 aa3.82□□□□□ -1.8
BRCA1-216ENST00000484087 TPRXLQ17RH7 258 aa3.8□□□□□ -1.8
BRCA1-216ENST00000484087 FAT4Q6V0I7 4981 aa3.8□□□□□ -1.8
BRCA1-216ENST00000484087 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
BRCA1-216ENST00000484087 PCOTHQ58A44 107 aa3.79□□□□□ -1.8
BRCA1-216ENST00000484087 Q5W150 140 aa3.79□□□□□ -1.8
BRCA1-216ENST00000484087 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-216ENST00000484087 CYP4F30PQ9H0H9 118 aa3.79□□□□□ -1.8
BRCA1-216ENST00000484087 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
BRCA1-216ENST00000484087 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
BRCA1-216ENST00000484087 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
BRCA1-216ENST00000484087 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
BRCA1-216ENST00000484087 C20orf166-AS1Q96NR2 134 aa3.76□□□□□ -1.81
BRCA1-216ENST00000484087 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
BRCA1-216ENST00000484087 A8MUU9 505 aa3.75□□□□□ -1.81
BRCA1-216ENST00000484087 IGKV2D-30A0A075B6S6 120 aa3.74□□□□□ -1.81
BRCA1-216ENST00000484087 C7orf65Q6ZTY9 151 aa3.73□□□□□ -1.81
BRCA1-216ENST00000484087 HRES1P13985 223 aa3.72□□□□□ -1.81
BRCA1-216ENST00000484087 ACYP2P14621 99 aa3.71□□□□□ -1.82
BRCA1-216ENST00000484087 ATP11AUNQ6ZP68 121 aa3.71□□□□□ -1.82
BRCA1-216ENST00000484087 COA5Q86WW8 74 aa3.69□□□□□ -1.82
BRCA1-216ENST00000484087 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-216ENST00000484087 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
BRCA1-216ENST00000484087 V9GYY9 64 aa3.68□□□□□ -1.82
BRCA1-216ENST00000484087 CHKB-CPT1BH3BT56 60 aa3.67□□□□□ -1.82
BRCA1-216ENST00000484087 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
BRCA1-216ENST00000484087 A8MUN3 132 aa3.66□□□□□ -1.82
BRCA1-216ENST00000484087 SPINK7P58062 85 aa3.66□□□□□ -1.82
BRCA1-216ENST00000484087 Q1T7F1 81 aa3.64□□□□□ -1.83
BRCA1-216ENST00000484087 C4orf26Q17RF5 130 aa3.62□□□□□ -1.83
BRCA1-216ENST00000484087 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
BRCA1-216ENST00000484087 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
BRCA1-216ENST00000484087 COX6B2Q6YFQ2 88 aa3.58□□□□□ -1.84
BRCA1-216ENST00000484087 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
BRCA1-216ENST00000484087 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-216ENST00000484087 PSPHP1O15172 72 aa3.57□□□□□ -1.84
BRCA1-216ENST00000484087 MT1HP80294 61 aa3.57□□□□□ -1.84
BRCA1-216ENST00000484087 PRR15LQ9BU68 103 aa3.57□□□□□ -1.84
BRCA1-216ENST00000484087 PRAC1Q96KF2 57 aa3.56□□□□□ -1.84
BRCA1-216ENST00000484087 RBM12B-AS1Q9P1G2 102 aa3.54□□□□□ -1.84
BRCA1-216ENST00000484087 A0A1B0GU69 56 aa3.53□□□□□ -1.84
BRCA1-216ENST00000484087 SEC61GP60059 68 aa3.53□□□□□ -1.84
BRCA1-216ENST00000484087 Q5VV11 94 aa3.52□□□□□ -1.85
BRCA1-216ENST00000484087 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
BRCA1-216ENST00000484087 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
BRCA1-216ENST00000484087 A6NED7 52 aa3.49□□□□□ -1.85
BRCA1-216ENST00000484087 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
BRCA1-216ENST00000484087 M0R2T5 61 aa3.48□□□□□ -1.85
BRCA1-216ENST00000484087 H1FX-AS1Q4G0G2 97 aa3.48□□□□□ -1.85
BRCA1-216ENST00000484087 S4R3F8 94 aa3.48□□□□□ -1.85
BRCA1-216ENST00000484087 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-216ENST00000484087 PRO0628Q9UI54 55 aa3.46□□□□□ -1.86
BRCA1-216ENST00000484087 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-216ENST00000484087 UQCR11O14957 56 aa3.44□□□□□ -1.86
BRCA1-216ENST00000484087 LCA10Q71F78 164 aa3.44□□□□□ -1.86
BRCA1-216ENST00000484087 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
BRCA1-216ENST00000484087 CSAG1Q6PB30 78 aa3.41□□□□□ -1.86
BRCA1-216ENST00000484087 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
BRCA1-216ENST00000484087 A0A1B0GU33 70 aa3.39□□□□□ -1.87
BRCA1-216ENST00000484087 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
BRCA1-216ENST00000484087 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
BRCA1-216ENST00000484087 USH2AO75445 5202 aa3.35□□□□□ -1.87
BRCA1-216ENST00000484087 MT2AP02795 61 aa3.35□□□□□ -1.87
BRCA1-216ENST00000484087 A8MU10 97 aa3.33□□□□□ -1.88
BRCA1-216ENST00000484087 MT1FP04733 61 aa3.33□□□□□ -1.88
BRCA1-216ENST00000484087 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
BRCA1-216ENST00000484087 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
BRCA1-216ENST00000484087 H0YAA0 97 aa3.32□□□□□ -1.88
BRCA1-216ENST00000484087 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
BRCA1-216ENST00000484087 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
BRCA1-216ENST00000484087 K7ERS5 55 aa3.29□□□□□ -1.88
BRCA1-216ENST00000484087 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
BRCA1-216ENST00000484087 P0C880 135 aa3.28□□□□□ -1.88
BRCA1-216ENST00000484087 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
BRCA1-216ENST00000484087 M0QZ58 72 aa3.26□□□□□ -1.89
BRCA1-216ENST00000484087 A6NN06 94 aa3.24□□□□□ -1.89
BRCA1-216ENST00000484087 R4GN34 69 aa3.22□□□□□ -1.89
BRCA1-216ENST00000484087 A0A0D9SG42 100 aa3.22□□□□□ -1.89
BRCA1-216ENST00000484087 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
BRCA1-216ENST00000484087 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
BRCA1-216ENST00000484087 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-216ENST00000484087 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
BRCA1-216ENST00000484087 CRIPTQ9P021 101 aa3.17□□□□□ -1.9
BRCA1-216ENST00000484087 SPINT4Q6UDR6 99 aa3.16□□□□□ -1.9
BRCA1-216ENST00000484087 LINC01554Q52M75 96 aa3.16□□□□□ -1.9
BRCA1-216ENST00000484087 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
BRCA1-216ENST00000484087 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
BRCA1-216ENST00000484087 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
BRCA1-216ENST00000484087 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
BRCA1-216ENST00000484087 KRTAP12-1P59990 96 aa3.12□□□□□ -1.91
BRCA1-216ENST00000484087 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
BRCA1-216ENST00000484087 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
BRCA1-216ENST00000484087 ROMO1P60602 79 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms