RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 DNAH2Q9P225 4427 aa3.97□□□□□ -1.77
COL4A5-205ENST00000483338 KRTAP12-1P59990 96 aa3.96□□□□□ -1.77
COL4A5-205ENST00000483338 KRTAP3-3Q9BYR6 98 aa3.95□□□□□ -1.78
COL4A5-205ENST00000483338 DNAH11Q96DT5 4516 aa3.94□□□□□ -1.78
COL4A5-205ENST00000483338 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
COL4A5-205ENST00000483338 SACSQ9NZJ4 4579 aa3.92□□□□□ -1.78
COL4A5-205ENST00000483338 Q5VSD8 79 aa3.91□□□□□ -1.78
COL4A5-205ENST00000483338 HYDINQ4G0P3 5121 aa3.91□□□□□ -1.78
COL4A5-205ENST00000483338 KRTAP1-4P0C5Y4 121 aa3.89□□□□□ -1.79
COL4A5-205ENST00000483338 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
COL4A5-205ENST00000483338 RYR2Q92736 4967 aa3.87□□□□□ -1.79
COL4A5-205ENST00000483338 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
COL4A5-205ENST00000483338 J3QL48 77 aa3.85□□□□□ -1.79
COL4A5-205ENST00000483338 VPS13BQ7Z7G8 4022 aa3.84□□□□□ -1.79
COL4A5-205ENST00000483338 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
COL4A5-205ENST00000483338 DNAH5Q8TE73 4624 aa3.82□□□□□ -1.8
COL4A5-205ENST00000483338 DYNC1H1Q14204 4646 aaKnown RBP3.82□□□□□ -1.8
COL4A5-205ENST00000483338 RYR3Q15413 4870 aa3.81□□□□□ -1.8
COL4A5-205ENST00000483338 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
COL4A5-205ENST00000483338 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
COL4A5-205ENST00000483338 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
COL4A5-205ENST00000483338 PKHD1P08F94 4074 aa3.79□□□□□ -1.8
COL4A5-205ENST00000483338 FAT1Q14517 4588 aa3.77□□□□□ -1.81
COL4A5-205ENST00000483338 KRTAP4-5Q9BYR2 181 aa3.76□□□□□ -1.81
COL4A5-205ENST00000483338 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
COL4A5-205ENST00000483338 APOBP04114 4563 aaKnown RBP3.75□□□□□ -1.81
COL4A5-205ENST00000483338 RPS29P62273 56 aaKnown RBP3.74□□□□□ -1.81
COL4A5-205ENST00000483338 M0QZ58 72 aa3.73□□□□□ -1.81
COL4A5-205ENST00000483338 EPPK1P58107 5090 aaKnown RBP3.73□□□□□ -1.81
COL4A5-205ENST00000483338 KRTAP10-4P60372 401 aaPredicted RBP3.73□□□□□ -1.81
COL4A5-205ENST00000483338 KRTAP17-1Q9BYP8 105 aa3.71□□□□□ -1.81
COL4A5-205ENST00000483338 PKD1P98161 4303 aa3.71□□□□□ -1.82
COL4A5-205ENST00000483338 RYR1P21817 5038 aa3.68□□□□□ -1.82
COL4A5-205ENST00000483338 R4GN34 69 aa3.67□□□□□ -1.82
COL4A5-205ENST00000483338 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
COL4A5-205ENST00000483338 PKHD1L1Q86WI1 4243 aa3.67□□□□□ -1.82
COL4A5-205ENST00000483338 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
COL4A5-205ENST00000483338 PP632Q6XCG6 107 aa3.65□□□□□ -1.82
COL4A5-205ENST00000483338 HSPG2P98160 4391 aa3.65□□□□□ -1.83
COL4A5-205ENST00000483338 LRP1Q07954 4544 aaKnown RBP3.64□□□□□ -1.83
COL4A5-205ENST00000483338 MT1HL1P0DM35 61 aa3.62□□□□□ -1.83
COL4A5-205ENST00000483338 INE1O15225 51 aa3.59□□□□□ -1.83
COL4A5-205ENST00000483338 HERC2O95714 4834 aa3.59□□□□□ -1.84
COL4A5-205ENST00000483338 TNXBP22105 4242 aa3.55□□□□□ -1.84
COL4A5-205ENST00000483338 ABCA13Q86UQ4 5058 aa3.53□□□□□ -1.85
COL4A5-205ENST00000483338 FAT3Q8TDW7 4589 aa3.51□□□□□ -1.85
COL4A5-205ENST00000483338 LPAP08519 4548 aa3.48□□□□□ -1.85
COL4A5-205ENST00000483338 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
COL4A5-205ENST00000483338 PCLOQ9Y6V0 5065 aa3.43□□□□□ -1.86
COL4A5-205ENST00000483338 M0R2T5 61 aa3.4□□□□□ -1.86
COL4A5-205ENST00000483338 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
COL4A5-205ENST00000483338 HERC1Q15751 4861 aa3.37□□□□□ -1.87
COL4A5-205ENST00000483338 TNP1P09430 55 aa3.36□□□□□ -1.87
COL4A5-205ENST00000483338 LRP2P98164 4655 aa3.34□□□□□ -1.87
COL4A5-205ENST00000483338 KRTAP4-1Q9BYQ7 146 aa3.26□□□□□ -1.89
COL4A5-205ENST00000483338 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
COL4A5-205ENST00000483338 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
COL4A5-205ENST00000483338 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
COL4A5-205ENST00000483338 RNF213Q63HN8 5207 aa3.18□□□□□ -1.9
COL4A5-205ENST00000483338 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
COL4A5-205ENST00000483338 MUC2Q02817 5179 aa3.15□□□□□ -1.91
COL4A5-205ENST00000483338 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
COL4A5-205ENST00000483338 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
COL4A5-205ENST00000483338 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
COL4A5-205ENST00000483338 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
COL4A5-205ENST00000483338 KRTAP10-12P60413 245 aa3.09□□□□□ -1.92
COL4A5-205ENST00000483338 MT1HP80294 61 aa3.07□□□□□ -1.92
COL4A5-205ENST00000483338 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
COL4A5-205ENST00000483338 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
COL4A5-205ENST00000483338 KRTAP19-2Q3LHN2 52 aa3.05□□□□□ -1.92
COL4A5-205ENST00000483338 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
COL4A5-205ENST00000483338 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
COL4A5-205ENST00000483338 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
COL4A5-205ENST00000483338 MT2AP02795 61 aa2.93□□□□□ -1.94
COL4A5-205ENST00000483338 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
COL4A5-205ENST00000483338 MT1FP04733 61 aa2.92□□□□□ -1.94
COL4A5-205ENST00000483338 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.94
COL4A5-205ENST00000483338 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
COL4A5-205ENST00000483338 KRTAP2-3P0C7H8 128 aa2.87□□□□□ -1.95
COL4A5-205ENST00000483338 KRTAP2-4Q9BYR9 128 aa2.87□□□□□ -1.95
COL4A5-205ENST00000483338 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
COL4A5-205ENST00000483338 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
COL4A5-205ENST00000483338 LCE2DQ5TA82 110 aaPredicted RBP2.85□□□□□ -1.95
COL4A5-205ENST00000483338 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.96
COL4A5-205ENST00000483338 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
COL4A5-205ENST00000483338 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
COL4A5-205ENST00000483338 KRTAP9-3Q9BYQ3 159 aa2.81□□□□□ -1.96
COL4A5-205ENST00000483338 KRTAP10-7P60409 375 aaPredicted RBP2.79□□□□□ -1.96
COL4A5-205ENST00000483338 LCE2BO14633 110 aa2.76□□□□□ -1.97
COL4A5-205ENST00000483338 KRTAP9-2Q9BYQ4 174 aa2.75□□□□□ -1.97
COL4A5-205ENST00000483338 MT1XP80297 61 aa2.75□□□□□ -1.97
COL4A5-205ENST00000483338 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
COL4A5-205ENST00000483338 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
COL4A5-205ENST00000483338 MT1BP07438 61 aa2.71□□□□□ -1.98
COL4A5-205ENST00000483338 CRCT1Q9UGL9 99 aa2.71□□□□□ -1.98
COL4A5-205ENST00000483338 KRTAP19-5Q3LI72 72 aa2.69□□□□□ -1.98
COL4A5-205ENST00000483338 USH2AO75445 5202 aa2.69□□□□□ -1.98
COL4A5-205ENST00000483338 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
COL4A5-205ENST00000483338 KMT2DO14686 5537 aa2.64□□□□□ -1.99
COL4A5-205ENST00000483338 KRTAP4-8A0A0G2JLE6 195 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms