RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
SSR4-209ENST00000482902 KMT2CQ8NEZ4 4911 aaKnown RBP9.37□□□□□ -0.91
SSR4-209ENST00000482902 LRP1Q07954 4544 aaKnown RBP9.36□□□□□ -0.91
SSR4-209ENST00000482902 TNXBP22105 4242 aa9.35□□□□□ -0.91
SSR4-209ENST00000482902 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
SSR4-209ENST00000482902 RPL37P61927 97 aaKnown RBP9.33□□□□□ -0.92
SSR4-209ENST00000482902 TPRXLQ17RH7 258 aa9.32□□□□□ -0.92
SSR4-209ENST00000482902 KRTAP10-6P60371 365 aaPredicted RBP9.31□□□□□ -0.92
SSR4-209ENST00000482902 KRTAP13-4Q3LI77 160 aa9.3□□□□□ -0.92
SSR4-209ENST00000482902 Q5VSD8 79 aa9.3□□□□□ -0.92
SSR4-209ENST00000482902 SPINT4Q6UDR6 99 aa9.24□□□□□ -0.93
SSR4-209ENST00000482902 HSPG2P98160 4391 aa9.23□□□□□ -0.93
SSR4-209ENST00000482902 A0A0D9SG42 100 aa9.23□□□□□ -0.93
SSR4-209ENST00000482902 XP32Q5T750 250 aa9.23□□□□□ -0.93
SSR4-209ENST00000482902 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
SSR4-209ENST00000482902 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.94
SSR4-209ENST00000482902 C10orf95Q9H7T3 257 aa9.19□□□□□ -0.94
SSR4-209ENST00000482902 DMBT1Q9UGM3 2413 aaPredicted RBP9.18□□□□□ -0.94
SSR4-209ENST00000482902 MYCBP2O75592 4640 aa9.15□□□□□ -0.94
SSR4-209ENST00000482902 RYR1P21817 5038 aa9.14□□□□□ -0.95
SSR4-209ENST00000482902 RYR3Q15413 4870 aa9.13□□□□□ -0.95
SSR4-209ENST00000482902 KRTAP15-1Q3LI76 137 aa9.13□□□□□ -0.95
SSR4-209ENST00000482902 S4R3F8 94 aa9.12□□□□□ -0.95
SSR4-209ENST00000482902 KRTAP17-1Q9BYP8 105 aa9.11□□□□□ -0.95
SSR4-209ENST00000482902 NDUFAF8A1L188 74 aa9.06□□□□□ -0.96
SSR4-209ENST00000482902 MT1HL1P0DM35 61 aa9.04□□□□□ -0.96
SSR4-209ENST00000482902 KRTAP12-2P59991 146 aa9.03□□□□□ -0.96
SSR4-209ENST00000482902 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
SSR4-209ENST00000482902 KRTAP12-1P59990 96 aa8.93□□□□□ -0.98
SSR4-209ENST00000482902 LPAP08519 4548 aa8.88□□□□□ -0.99
SSR4-209ENST00000482902 LRP2P98164 4655 aa8.84□□□□□ -0.99
SSR4-209ENST00000482902 EPPK1P58107 5090 aaKnown RBP8.83□□□□□ -1
SSR4-209ENST00000482902 M0QZ58 72 aa8.7□□□□□ -1.02
SSR4-209ENST00000482902 ABCA13Q86UQ4 5058 aa8.67□□□□□ -1.02
SSR4-209ENST00000482902 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
SSR4-209ENST00000482902 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
SSR4-209ENST00000482902 R4GN34 69 aa8.47□□□□□ -1.05
SSR4-209ENST00000482902 MUC17Q685J3 4493 aa8.47□□□□□ -1.05
SSR4-209ENST00000482902 PLAC4Q8WY50 150 aa8.46□□□□□ -1.05
SSR4-209ENST00000482902 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
SSR4-209ENST00000482902 J3QL48 77 aa8.38□□□□□ -1.07
SSR4-209ENST00000482902 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
SSR4-209ENST00000482902 BIRC6Q9NR09 4857 aa8.34□□□□□ -1.07
SSR4-209ENST00000482902 A0A0A0MQY5 61 aa8.31□□□□□ -1.08
SSR4-209ENST00000482902 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
SSR4-209ENST00000482902 HERC2O95714 4834 aa8.28□□□□□ -1.08
SSR4-209ENST00000482902 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
SSR4-209ENST00000482902 PP632Q6XCG6 107 aa8.15□□□□□ -1.1
SSR4-209ENST00000482902 PCLOQ9Y6V0 5065 aa8.13□□□□□ -1.11
SSR4-209ENST00000482902 MUC2Q02817 5179 aa8.08□□□□□ -1.12
SSR4-209ENST00000482902 CAMK2N1Q7Z7J9 78 aa8.05□□□□□ -1.12
SSR4-209ENST00000482902 FLGP20930 4061 aaPredicted RBP8.03□□□□□ -1.12
SSR4-209ENST00000482902 HERC1Q15751 4861 aa7.91□□□□□ -1.14
SSR4-209ENST00000482902 SPRR5A0A1B0GTR4 108 aa7.87□□□□□ -1.15
SSR4-209ENST00000482902 HMCN2Q8NDA2 5059 aa7.85□□□□□ -1.15
SSR4-209ENST00000482902 KRTAP23-1A1A580 65 aa7.78□□□□□ -1.16
SSR4-209ENST00000482902 TNP1P09430 55 aa7.77□□□□□ -1.17
SSR4-209ENST00000482902 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
SSR4-209ENST00000482902 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.18
SSR4-209ENST00000482902 SPRR2GQ9BYE4 73 aa7.64□□□□□ -1.19
SSR4-209ENST00000482902 M0R2T5 61 aa7.62□□□□□ -1.19
SSR4-209ENST00000482902 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
SSR4-209ENST00000482902 MT1HP80294 61 aa7.56□□□□□ -1.2
SSR4-209ENST00000482902 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
SSR4-209ENST00000482902 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
SSR4-209ENST00000482902 MT1FP04733 61 aa7.46□□□□□ -1.22
SSR4-209ENST00000482902 MT2AP02795 61 aa7.46□□□□□ -1.22
SSR4-209ENST00000482902 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
SSR4-209ENST00000482902 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
SSR4-209ENST00000482902 PRO2289Q9P1D8 64 aa7.39□□□□□ -1.23
SSR4-209ENST00000482902 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
SSR4-209ENST00000482902 KRTAP19-8Q3LI54 63 aa7.3□□□□□ -1.24
SSR4-209ENST00000482902 INE1O15225 51 aa7.24□□□□□ -1.25
SSR4-209ENST00000482902 MT1BP07438 61 aa7.21□□□□□ -1.25
SSR4-209ENST00000482902 KRTAP10-5P60370 271 aa7.18□□□□□ -1.26
SSR4-209ENST00000482902 MT1XP80297 61 aa7.17□□□□□ -1.26
SSR4-209ENST00000482902 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
SSR4-209ENST00000482902 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
SSR4-209ENST00000482902 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
SSR4-209ENST00000482902 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
SSR4-209ENST00000482902 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
SSR4-209ENST00000482902 LCE2BO14633 110 aa6.79□□□□□ -1.32
SSR4-209ENST00000482902 KRTAP19-5Q3LI72 72 aa6.69□□□□□ -1.34
SSR4-209ENST00000482902 USH2AO75445 5202 aa6.67□□□□□ -1.34
SSR4-209ENST00000482902 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
SSR4-209ENST00000482902 LCE3CQ5T5A8 94 aa6.59□□□□□ -1.35
SSR4-209ENST00000482902 KMT2DO14686 5537 aa6.58□□□□□ -1.36
SSR4-209ENST00000482902 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
SSR4-209ENST00000482902 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
SSR4-209ENST00000482902 KRTAP9-6A8MVA2 160 aa6.45□□□□□ -1.38
SSR4-209ENST00000482902 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
SSR4-209ENST00000482902 KRTAP2-3P0C7H8 128 aa6.37□□□□□ -1.39
SSR4-209ENST00000482902 KRTAP2-4Q9BYR9 128 aa6.37□□□□□ -1.39
SSR4-209ENST00000482902 KRTAP2-1Q9BYU5 128 aa6.37□□□□□ -1.39
SSR4-209ENST00000482902 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
SSR4-209ENST00000482902 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
SSR4-209ENST00000482902 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
SSR4-209ENST00000482902 MT1EP04732 61 aa6.2□□□□□ -1.42
SSR4-209ENST00000482902 MT1LQ93083 61 aa6.2□□□□□ -1.42
SSR4-209ENST00000482902 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms