RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
TRAPPC12-220ENST00000482645 A8MUN3 132 aa9.78□□□□□ -0.84
TRAPPC12-220ENST00000482645 KRTAP10-6P60371 365 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-220ENST00000482645 SERP1Q9Y6X1 66 aa9.72□□□□□ -0.85
TRAPPC12-220ENST00000482645 ATP5EP56381 51 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC12-220ENST00000482645 S4R3F8 94 aa9.69□□□□□ -0.86
TRAPPC12-220ENST00000482645 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-220ENST00000482645 ACYP2P14621 99 aa9.67□□□□□ -0.86
TRAPPC12-220ENST00000482645 PRO0628Q9UI54 55 aa9.65□□□□□ -0.86
TRAPPC12-220ENST00000482645 LCA10Q71F78 164 aa9.64□□□□□ -0.87
TRAPPC12-220ENST00000482645 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
TRAPPC12-220ENST00000482645 CHKB-CPT1BH3BT56 60 aa9.56□□□□□ -0.88
TRAPPC12-220ENST00000482645 COA5Q86WW8 74 aa9.55□□□□□ -0.88
TRAPPC12-220ENST00000482645 KRTAP3-3Q9BYR6 98 aa9.54□□□□□ -0.88
TRAPPC12-220ENST00000482645 KRTAP9-8Q9BYQ0 159 aa9.52□□□□□ -0.88
TRAPPC12-220ENST00000482645 CSAG1Q6PB30 78 aa9.47□□□□□ -0.89
TRAPPC12-220ENST00000482645 MT2AP02795 61 aa9.46□□□□□ -0.89
TRAPPC12-220ENST00000482645 SPTSSBQ8NFR3 76 aa9.41□□□□□ -0.9
TRAPPC12-220ENST00000482645 MT1FP04733 61 aa9.41□□□□□ -0.9
TRAPPC12-220ENST00000482645 KRTAP10-10P60014 251 aa9.41□□□□□ -0.9
TRAPPC12-220ENST00000482645 KRTAP9-2Q9BYQ4 174 aa9.35□□□□□ -0.91
TRAPPC12-220ENST00000482645 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC12-220ENST00000482645 V9GYY9 64 aa9.26□□□□□ -0.93
TRAPPC12-220ENST00000482645 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.93
TRAPPC12-220ENST00000482645 H0YAA0 97 aa9.21□□□□□ -0.94
TRAPPC12-220ENST00000482645 Q1T7F1 81 aa9.21□□□□□ -0.94
TRAPPC12-220ENST00000482645 BRK1Q8WUW1 75 aa9.21□□□□□ -0.94
TRAPPC12-220ENST00000482645 KRTAP9-3Q9BYQ3 159 aa9.21□□□□□ -0.94
TRAPPC12-220ENST00000482645 SEC61GP60059 68 aa9.15□□□□□ -0.95
TRAPPC12-220ENST00000482645 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
TRAPPC12-220ENST00000482645 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
TRAPPC12-220ENST00000482645 P0C880 135 aa9.1□□□□□ -0.95
TRAPPC12-220ENST00000482645 LCE2BO14633 110 aa9.07□□□□□ -0.96
TRAPPC12-220ENST00000482645 PMAIP1Q13794 54 aa9.05□□□□□ -0.96
TRAPPC12-220ENST00000482645 A0A1B0GU69 56 aa9.05□□□□□ -0.96
TRAPPC12-220ENST00000482645 LINC01558Q9Y6Z2 57 aa9.04□□□□□ -0.96
TRAPPC12-220ENST00000482645 USH2AO75445 5202 aa9.02□□□□□ -0.96
TRAPPC12-220ENST00000482645 KRTAP19-1Q8IUB9 90 aa8.98□□□□□ -0.97
TRAPPC12-220ENST00000482645 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
TRAPPC12-220ENST00000482645 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
TRAPPC12-220ENST00000482645 SPRR2GQ9BYE4 73 aa8.93□□□□□ -0.98
TRAPPC12-220ENST00000482645 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
TRAPPC12-220ENST00000482645 R4GN34 69 aa8.91□□□□□ -0.98
TRAPPC12-220ENST00000482645 M0QZ58 72 aa8.9□□□□□ -0.99
TRAPPC12-220ENST00000482645 PSPHP1O15172 72 aa8.87□□□□□ -0.99
TRAPPC12-220ENST00000482645 KRTAP9-6A0A140TA67 174 aa8.85□□□□□ -0.99
TRAPPC12-220ENST00000482645 A0A1B0GU33 70 aa8.85□□□□□ -0.99
TRAPPC12-220ENST00000482645 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
TRAPPC12-220ENST00000482645 Q5VV11 94 aa8.83□□□□□ -1
TRAPPC12-220ENST00000482645 KRTAP13-4Q3LI77 160 aa8.8□□□□□ -1
TRAPPC12-220ENST00000482645 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
TRAPPC12-220ENST00000482645 KRTAP19-8Q3LI54 63 aa8.78□□□□□ -1
TRAPPC12-220ENST00000482645 SPATA8Q6RVD6 105 aa8.76□□□□□ -1.01
TRAPPC12-220ENST00000482645 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
TRAPPC12-220ENST00000482645 MT1BP07438 61 aa8.74□□□□□ -1.01
TRAPPC12-220ENST00000482645 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
TRAPPC12-220ENST00000482645 UQCR11O14957 56 aa8.68□□□□□ -1.02
TRAPPC12-220ENST00000482645 A6NN06 94 aa8.65□□□□□ -1.02
TRAPPC12-220ENST00000482645 A0A0D9SG42 100 aa8.64□□□□□ -1.03
TRAPPC12-220ENST00000482645 KRTAP19-6Q3LI70 58 aa8.63□□□□□ -1.03
TRAPPC12-220ENST00000482645 A6NED7 52 aa8.6□□□□□ -1.03
TRAPPC12-220ENST00000482645 A8MU10 97 aa8.59□□□□□ -1.03
TRAPPC12-220ENST00000482645 MIR22HGQ0VDD5 57 aa8.58□□□□□ -1.04
TRAPPC12-220ENST00000482645 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
TRAPPC12-220ENST00000482645 FCGBPQ9Y6R7 5405 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC12-220ENST00000482645 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
TRAPPC12-220ENST00000482645 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
TRAPPC12-220ENST00000482645 KRTAP10-5P60370 271 aa8.43□□□□□ -1.06
TRAPPC12-220ENST00000482645 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
TRAPPC12-220ENST00000482645 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
TRAPPC12-220ENST00000482645 MT1XP80297 61 aa8.33□□□□□ -1.08
TRAPPC12-220ENST00000482645 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
TRAPPC12-220ENST00000482645 MACF1Q9UPN3 7388 aaKnown RBP8.3□□□□□ -1.08
TRAPPC12-220ENST00000482645 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC12-220ENST00000482645 K7ERS5 55 aa8.26□□□□□ -1.09
TRAPPC12-220ENST00000482645 SYNE2Q8WXH0 6885 aaKnown RBP8.11□□□□□ -1.11
TRAPPC12-220ENST00000482645 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
TRAPPC12-220ENST00000482645 PRAC1Q96KF2 57 aa8.01□□□□□ -1.13
TRAPPC12-220ENST00000482645 C10orf95Q9H7T3 257 aa8□□□□□ -1.13
TRAPPC12-220ENST00000482645 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC12-220ENST00000482645 KMT2DO14686 5537 aa7.99□□□□□ -1.13
TRAPPC12-220ENST00000482645 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
TRAPPC12-220ENST00000482645 KRTAP6-3Q3LI67 103 aa7.86□□□□□ -1.15
TRAPPC12-220ENST00000482645 KRTAP4-8A0A0G2JLE6 195 aa7.84□□□□□ -1.15
TRAPPC12-220ENST00000482645 ROMO1P60602 79 aa7.84□□□□□ -1.15
TRAPPC12-220ENST00000482645 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.15
TRAPPC12-220ENST00000482645 TNP1P09430 55 aa7.83□□□□□ -1.16
TRAPPC12-220ENST00000482645 H3BS24 57 aa7.82□□□□□ -1.16
TRAPPC12-220ENST00000482645 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
TRAPPC12-220ENST00000482645 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
TRAPPC12-220ENST00000482645 KRTAP5-9P26371 169 aa7.71□□□□□ -1.18
TRAPPC12-220ENST00000482645 MUC12Q9UKN1 5478 aa7.69□□□□□ -1.18
TRAPPC12-220ENST00000482645 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
TRAPPC12-220ENST00000482645 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
TRAPPC12-220ENST00000482645 MDN1Q9NU22 5596 aa7.55□□□□□ -1.2
TRAPPC12-220ENST00000482645 NEBP20929 6669 aa7.5□□□□□ -1.21
TRAPPC12-220ENST00000482645 SPRR2EP22531 72 aa7.45□□□□□ -1.22
TRAPPC12-220ENST00000482645 SPRR2BP35325 72 aa7.45□□□□□ -1.22
TRAPPC12-220ENST00000482645 SPRR2AP35326 72 aa7.45□□□□□ -1.22
TRAPPC12-220ENST00000482645 KRTAP19-7Q3SYF9 63 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms