RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 ETDBQ3ZM63 59 aa8.19□□□□□ -1.1
ABCF3-214ENST00000480562 IMUPQ9GZP8 106 aa8.19□□□□□ -1.1
ABCF3-214ENST00000480562 CRIPTQ9P021 101 aa8.19□□□□□ -1.1
ABCF3-214ENST00000480562 KMT2DO14686 5537 aa8.18□□□□□ -1.1
ABCF3-214ENST00000480562 MDN1Q9NU22 5596 aa8.15□□□□□ -1.1
ABCF3-214ENST00000480562 TRAV22A0A0B4J277 110 aa8.13□□□□□ -1.11
ABCF3-214ENST00000480562 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
ABCF3-214ENST00000480562 NDUFC1O43677 76 aa8.05□□□□□ -1.12
ABCF3-214ENST00000480562 PCP4L1A6NKN8 68 aa8.04□□□□□ -1.12
ABCF3-214ENST00000480562 ACYP1P07311 99 aa8.04□□□□□ -1.12
ABCF3-214ENST00000480562 H0YAA0 97 aa8.02□□□□□ -1.13
ABCF3-214ENST00000480562 H0Y9P7 68 aa8□□□□□ -1.13
ABCF3-214ENST00000480562 UQCRQO14949 82 aa8□□□□□ -1.13
ABCF3-214ENST00000480562 HIST1H4AP62805 103 aaKnown RBP8□□□□□ -1.13
ABCF3-214ENST00000480562 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
ABCF3-214ENST00000480562 ATP5EP2Q5VTU8 51 aa7.98□□□□□ -1.13
ABCF3-214ENST00000480562 ATOX1O00244 68 aa7.97□□□□□ -1.13
ABCF3-214ENST00000480562 A8MUN3 132 aa7.95□□□□□ -1.14
ABCF3-214ENST00000480562 FAM240AA0A1B0GVK7 77 aa7.94□□□□□ -1.14
ABCF3-214ENST00000480562 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
ABCF3-214ENST00000480562 MT1XP80297 61 aa7.93□□□□□ -1.14
ABCF3-214ENST00000480562 KRTAP2-3P0C7H8 128 aa7.92□□□□□ -1.14
ABCF3-214ENST00000480562 KRTAP2-4Q9BYR9 128 aa7.92□□□□□ -1.14
ABCF3-214ENST00000480562 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
ABCF3-214ENST00000480562 SPRR2EP22531 72 aa7.88□□□□□ -1.15
ABCF3-214ENST00000480562 SPRR2BP35325 72 aa7.88□□□□□ -1.15
ABCF3-214ENST00000480562 SPRR2AP35326 72 aa7.88□□□□□ -1.15
ABCF3-214ENST00000480562 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
ABCF3-214ENST00000480562 LINC00208Q96KT6 92 aa7.85□□□□□ -1.15
ABCF3-214ENST00000480562 LINC00643Q86TS7 51 aa7.82□□□□□ -1.16
ABCF3-214ENST00000480562 KRTAP8-1Q8IUC2 63 aa7.82□□□□□ -1.16
ABCF3-214ENST00000480562 SVIPQ8NHG7 77 aa7.81□□□□□ -1.16
ABCF3-214ENST00000480562 P0C880 135 aa7.78□□□□□ -1.16
ABCF3-214ENST00000480562 MP68P56378 58 aa7.78□□□□□ -1.16
ABCF3-214ENST00000480562 R4GN34 69 aa7.78□□□□□ -1.16
ABCF3-214ENST00000480562 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
ABCF3-214ENST00000480562 LCE1AQ5T7P2 110 aa7.74□□□□□ -1.17
ABCF3-214ENST00000480562 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
ABCF3-214ENST00000480562 M0QZ58 72 aa7.73□□□□□ -1.17
ABCF3-214ENST00000480562 KRTAP4-8A0A0G2JLE6 195 aa7.7□□□□□ -1.18
ABCF3-214ENST00000480562 C20orf197Q8N268 126 aa7.7□□□□□ -1.18
ABCF3-214ENST00000480562 KRTAP4-8Q9BYQ9 185 aa7.7□□□□□ -1.18
ABCF3-214ENST00000480562 LINC01554Q52M75 96 aa7.66□□□□□ -1.18
ABCF3-214ENST00000480562 KRTAP2-2Q9BYT5 123 aa7.65□□□□□ -1.18
ABCF3-214ENST00000480562 KRTAP2-1Q9BYU5 128 aa7.65□□□□□ -1.18
ABCF3-214ENST00000480562 H3BPC8 53 aa7.63□□□□□ -1.19
ABCF3-214ENST00000480562 SPRR2DP22532 72 aa7.63□□□□□ -1.19
ABCF3-214ENST00000480562 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
ABCF3-214ENST00000480562 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
ABCF3-214ENST00000480562 A0A1B0GV90 55 aa7.56□□□□□ -1.2
ABCF3-214ENST00000480562 SCGB1A1P11684 91 aa7.56□□□□□ -1.2
ABCF3-214ENST00000480562 J3QR89 54 aa7.51□□□□□ -1.21
ABCF3-214ENST00000480562 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
ABCF3-214ENST00000480562 TRAV7A0A075B6U4 112 aa7.45□□□□□ -1.22
ABCF3-214ENST00000480562 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
ABCF3-214ENST00000480562 MT-ATP8P03928 68 aa7.42□□□□□ -1.22
ABCF3-214ENST00000480562 ACYP2P14621 99 aa7.42□□□□□ -1.22
ABCF3-214ENST00000480562 SPTSSBQ8NFR3 76 aa7.37□□□□□ -1.23
ABCF3-214ENST00000480562 SMIM20Q8N5G0 67 aa7.29□□□□□ -1.24
ABCF3-214ENST00000480562 CHKB-CPT1BH3BT56 60 aa7.28□□□□□ -1.24
ABCF3-214ENST00000480562 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
ABCF3-214ENST00000480562 SNURFQ9Y675 71 aa7.16□□□□□ -1.26
ABCF3-214ENST00000480562 K7ERU9 68 aa7.13□□□□□ -1.27
ABCF3-214ENST00000480562 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
ABCF3-214ENST00000480562 GPR98Q8WXG9 6306 aa7.13□□□□□ -1.27
ABCF3-214ENST00000480562 DSTQ03001 7570 aaKnown RBP7.11□□□□□ -1.27
ABCF3-214ENST00000480562 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
ABCF3-214ENST00000480562 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
ABCF3-214ENST00000480562 LCE5AQ5TCM9 118 aa7.07□□□□□ -1.28
ABCF3-214ENST00000480562 MT1EP04732 61 aa7.04□□□□□ -1.28
ABCF3-214ENST00000480562 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.29
ABCF3-214ENST00000480562 KRTAP4-9Q9BYQ8 210 aa7.02□□□□□ -1.29
ABCF3-214ENST00000480562 SERP2Q8N6R1 65 aa6.97□□□□□ -1.29
ABCF3-214ENST00000480562 PCP4P48539 62 aa6.96□□□□□ -1.3
ABCF3-214ENST00000480562 A0A0D9SG42 100 aa6.93□□□□□ -1.3
ABCF3-214ENST00000480562 COA5Q86WW8 74 aa6.9□□□□□ -1.3
ABCF3-214ENST00000480562 SEC61GP60059 68 aa6.89□□□□□ -1.31
ABCF3-214ENST00000480562 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
ABCF3-214ENST00000480562 CYSTM1Q9H1C7 97 aa6.87□□□□□ -1.31
ABCF3-214ENST00000480562 KRTAP19-5Q3LI72 72 aa6.86□□□□□ -1.31
ABCF3-214ENST00000480562 SPATA8Q6RVD6 105 aa6.85□□□□□ -1.31
ABCF3-214ENST00000480562 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
ABCF3-214ENST00000480562 MT1GP13640 62 aa6.82□□□□□ -1.32
ABCF3-214ENST00000480562 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
ABCF3-214ENST00000480562 A0A1B0GU33 70 aa6.77□□□□□ -1.33
ABCF3-214ENST00000480562 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
ABCF3-214ENST00000480562 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
ABCF3-214ENST00000480562 MT1MQ8N339 61 aa6.72□□□□□ -1.33
ABCF3-214ENST00000480562 HMCN1Q96RW7 5635 aa6.71□□□□□ -1.33
ABCF3-214ENST00000480562 MT4P47944 62 aa6.71□□□□□ -1.34
ABCF3-214ENST00000480562 COX7CP15954 63 aa6.7□□□□□ -1.34
ABCF3-214ENST00000480562 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
ABCF3-214ENST00000480562 MT1LQ93083 61 aa6.68□□□□□ -1.34
ABCF3-214ENST00000480562 H7BZZ5 65 aa6.63□□□□□ -1.35
ABCF3-214ENST00000480562 KRTAP4-3Q9BYR4 195 aa6.62□□□□□ -1.35
ABCF3-214ENST00000480562 AHNAK2Q8IVF2 5795 aa6.61□□□□□ -1.35
ABCF3-214ENST00000480562 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
ABCF3-214ENST00000480562 LOC100996750A0A140TA64 210 aa6.59□□□□□ -1.35
ABCF3-214ENST00000480562 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
ABCF3-214ENST00000480562 A0A1B0GU69 56 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms